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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918572
Clone id YMU001_000115_B01
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGAAAATGTCTACATGATTAGAATGATTGGCCGCACAGACTTGGGCGGCGAATACAGAA
ACAAGGCTCTTAAAAGAGATGAATTAAAATTTGGTGATGTGCCTCATCGTTACAAAAGTG
TATGTTCACAAGGTCTCCTTGAGAGAAAAAAGGGCTACGAACGCATTGTCGTTGTCTCCG
AGGATAAATCATTGATTTCTAGACAGAGGGCTTCTGGACAAGGAAGCCGGAGACCTGCAC
CTGCCTCTTGGCGTCAAAGCCCAGCACGCGGATGAAGGCTTCGGGGTACTCCTTGGCGCA
CTCTGCAATTTCACGCAGCACAGCGGCGGCATCTTGGCAGCCAAACATGGGCAACTTCCA
CATCACCCAGTATCGCCCATCGTAGTAGCCGCTGCCATGGAAGTGCTCTCGGTATACGCT
TCCGATTTTGTCGAACTCAATGCAGGGGGTCCAGCCCTTCCGGACCATGAAGTCCACCCG
CTTCGCAATCTGCTCGCTTGTCAAAGGCGGCAAGTAGGACAGAGTCTCGAACTTCTTGTT
GTCATACGGCTTCCACACAAGCATGGCGCTC
■■Homology search results ■■ -
sp_hit_id O48550
Definition sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica
Align length 119
Score (bit) 172.0
E-value 1.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918572|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B01.
         (571 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   170   5e-42
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   169   9e-42
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   168   2e-41
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   167   4e-41
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   167   4e-41
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   166   1e-40
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   165   2e-40
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   165   2e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   165   2e-40
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   164   3e-40
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   163   5e-40
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   163   5e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   163   5e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   163   5e-40
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   162   8e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   162   1e-39
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   161   2e-39
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   161   2e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   161   2e-39

>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  172 bits (435), Expect = 1e-42
 Identities = 74/119 (62%), Positives = 90/119 (75%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 385
           M VW P   KKFETLSYLPPLT EQ+ + VD+++R GW PCIEF K+G VYRE+ +  GY
Sbjct: 57  MQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGY 116

Query: 384 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 117 YDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  170 bits (430), Expect = 5e-42
 Identities = 74/120 (61%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 388
           M VW P   KK+ETLSYLPPL+ E ++K +D+++R  W PC+EF+ + G VYREH H  G
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPG 117

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  169 bits (428), Expect = 9e-42
 Identities = 76/120 (63%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 388
           M VW P   KKFETLSYLPPL+SEQ+AK VD+++RK   PC+EF+ + G VYREH    G
Sbjct: 60  MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPG 119

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 120 YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  168 bits (425), Expect = 2e-41
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 385
           M VW P+ N KFETLSYLP LT EQ+ K V++++R  W PC+EFD  GS+ R++    GY
Sbjct: 52  MQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGY 111

Query: 384 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 112 YDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  167 bits (422), Expect = 4e-41
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 385
           M VW PY NKKFETLSYLP LT EQ+ K V+++++  W PC+EF++ G + R + +  GY
Sbjct: 68  MQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGY 127

Query: 384 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 128 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  167 bits (422), Expect = 4e-41
 Identities = 73/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
 Frame = -2

Query: 570 SAMLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFD-KIGSVYREHFHG 394
           + M VW P   KKFETLSYLP LT  ++AK VD+++R  W PC+EF+ + G VYREH + 
Sbjct: 54  NCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNS 113

Query: 393 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 214
            GYYDGRYW MWKLP+FGC D+A VL+E+ EC KEYP AFIR++GFD  RQVQ   F+  
Sbjct: 114 PGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAY 173

Query: 213 KP 208
           KP
Sbjct: 174 KP 175


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  166 bits (421), Expect = 6e-41
 Identities = 74/122 (60%), Positives = 88/122 (72%)
 Frame = -2

Query: 570 SAMLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGS 391
           S M VW P   KKFETLSYLPPL+ E +AK VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 390 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 211
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 210 PS 205
           P+
Sbjct: 176 PT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  166 bits (421), Expect = 6e-41
 Identities = 74/122 (60%), Positives = 88/122 (72%)
 Frame = -2

Query: 570 SAMLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGS 391
           S M VW P   KKFETLSYLPPL+ E +AK VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 390 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 211
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 210 PS 205
           P+
Sbjct: 176 PT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  166 bits (421), Expect = 6e-41
 Identities = 74/122 (60%), Positives = 88/122 (72%)
 Frame = -2

Query: 570 SAMLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGS 391
           S M VW P   KKFETLSYLPPL+ E +AK VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 390 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 211
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 210 PS 205
           P+
Sbjct: 176 PT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  166 bits (421), Expect = 6e-41
 Identities = 74/122 (60%), Positives = 88/122 (72%)
 Frame = -2

Query: 570 SAMLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGS 391
           S M VW P   KKFETLSYLPPL+ E +AK VD+++R  W PCIEF K G VYRE+    
Sbjct: 56  SCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASP 115

Query: 390 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 211
           GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  K
Sbjct: 116 GYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175

Query: 210 PS 205
           P+
Sbjct: 176 PT 177
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 122
Score (bit) 239.0
E-value 6.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918572|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B01.
         (571 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   239   6e-62
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   172   9e-42
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   172   9e-42
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   169   8e-41
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   169   1e-40
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   168   2e-40
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   167   5e-40
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   166   1e-39
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q8CFJ2|Q8CFJ2_MOUSE Putative uncharacterized protein OS=Mus m...   164   4e-39
tr|Q42900|Q42900_LARLA Ribulose bisphosphate carboxylase small c...   164   4e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  239 bits (611), Expect = 6e-62
 Identities = 108/122 (88%), Positives = 118/122 (96%)
 Frame = -2

Query: 570 SAMLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGS 391
           SAMLVWKPYDNKKFETLSYLPPLT++QIAK+V++MVRKGWTPCIEFD IGSVYREHFHGS
Sbjct: 52  SAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGS 111

Query: 390 GYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 211
           GYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+K
Sbjct: 112 GYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKK 171

Query: 210 PS 205
           PS
Sbjct: 172 PS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  172 bits (437), Expect = 9e-42
 Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 394
           M VW P    KFET SYLPPLT +QIAK+VDFM+++   PCIEFD +GSV R +F G   
Sbjct: 57  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGS 116

Query: 393 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 214
           SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVA 176

Query: 213 KPS 205
           +P+
Sbjct: 177 RPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  172 bits (437), Expect = 9e-42
 Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 394
           M VW P    KFET SYLPPLT +QIAK+VDFM+++   PCIEFD +GSV R +F G   
Sbjct: 57  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGS 116

Query: 393 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 214
           SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVA 176

Query: 213 KPS 205
           +P+
Sbjct: 177 RPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  172 bits (436), Expect = 1e-41
 Identities = 74/120 (61%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 388
           M VW P   KK+ETLSYLPPL+ E ++K +D+++R  W PC+EF+ + G VYREH H  G
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPG 117

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  172 bits (435), Expect = 2e-41
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHGSGY 385
           M  W P +NKKFE LSYLPPL+ + IAK +D+M++KGW PC+EFD++GSV REH    GY
Sbjct: 50  MKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGY 109

Query: 384 YDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 110 YDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  171 bits (433), Expect = 3e-41
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 394
           M VW P    KFET SYLPPLT +QIAK+VD+M+++   PCIEFD +GSV R +F G   
Sbjct: 92  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGS 151

Query: 393 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 214
           SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 152 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVS 211

Query: 213 KPS 205
           +P+
Sbjct: 212 RPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  171 bits (433), Expect = 3e-41
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 394
           M VW P    KFET SYLPPLT +QIAK+VD+M+++   PCIEFD +GSV R +F G   
Sbjct: 62  MQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGS 121

Query: 393 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 214
           SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 122 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVS 181

Query: 213 KPS 205
           +P+
Sbjct: 182 RPN 184


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  171 bits (432), Expect = 3e-41
 Identities = 74/120 (61%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 388
           MLVW P   KKFETLSYLPPL+ E + K V++++RKGW PC+EF+ + G VYRE+    G
Sbjct: 50  MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVYRENNRSPG 109

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KRQVQ   F+  KP
Sbjct: 110 YYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCISFIAYKP 169


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  171 bits (432), Expect = 3e-41
 Identities = 75/120 (62%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFD-KIGSVYREHFHGSG 388
           M VW P   KKFETLSYLP LT EQ++K VD+++R GW PC+EF+ + G VYREH H  G
Sbjct: 59  MKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPG 118

Query: 387 YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 208
           YYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 119 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  169 bits (429), Expect = 8e-41
 Identities = 75/123 (60%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = -2

Query: 564 MLVWKPYDNKKFETLSYLPPLTSEQIAKRVDFMVRKGWTPCIEFDKIGSVYREHFHG--- 394
           M VW P    KFET SYLPPLT ++IAK+VD+M+++   PCIEFD +GSV R +F G   
Sbjct: 61  MQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGS 120

Query: 393 SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 214
           SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV 
Sbjct: 121 SGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVS 180

Query: 213 KPS 205
           +P+
Sbjct: 181 RPN 183