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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918576
Clone id YMU001_000115_B05
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CACAAGAGAGGACCTTGCTAAATTAGCAAGCATTTGGGGAGTTCAACAAATTGATGAGCC
TAGACTCGTGGTTTGAGTTAGAGAGCCGGTACTCACCAAATAAGAGCACCTTTACAGCGC
TCCATAGAAAGTGCATCCAGGGGACCATGCACCAAGTTTTTTTCACAGCAGGAGTGTGCA
TTCATGCTTGTGCACATGCAATAACACCAATGGTTCATGTGTGAGTATATGTGCACATAG
AGGGGCAAGCATGTGGCAGGATGCTAGCATGTTTTGCCATAGGCAGGTTCAATTAGGTAT
GCTGAGGGTATTATGCGGCGGGATCTGGCCCCATGAAGGGGACGCTCTTGAACCGAGTCA
AGGTTTTCCTAAGTTTTTCAGAGGATTTGTAGGCTAGTAGGGAGATACAGAAACACACTG
CTGGATTTAGTTGAAAATTGGTAGTCTAAAAGTCTACAACATTTTGTAAAGGGGACTTTG
TGAAGGGCACAGGGATTGTTGTTTGCGACGAGCTACGACTAAATTGAACCATCGA
■■Homology search results ■■ -
sp_hit_id O49290
Definition sp|O49290|CPPM_ARATH Putative carboxyvinyl-carboxyphosphonate phosphorylmutase OS=Arabidopsis thaliana
Align length 21
Score (bit) 38.5
E-value 0.02
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918576|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B05.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49290|CPPM_ARATH Putative carboxyvinyl-carboxyphosphonate ph...    39   0.020
sp|Q05957|PDP_DIACA Petal death protein OS=Dianthus caryophyllus...    35   0.30 
sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like domain-co...    31   3.3  
sp|P58294|PROK1_HUMAN Prokineticin-1 OS=Homo sapiens GN=PROK1 PE...    30   9.7  

>sp|O49290|CPPM_ARATH Putative carboxyvinyl-carboxyphosphonate
           phosphorylmutase OS=Arabidopsis thaliana GN=At1g77060
           PE=2 SV=2
          Length = 339

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYS 95
           F EFN L+ LDSWFELE+RYS
Sbjct: 308 FEEFNSLVDLDSWFELEARYS 328


>sp|Q05957|PDP_DIACA Petal death protein OS=Dianthus caryophyllus
           GN=PDP PE=1 SV=1
          Length = 318

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 12/20 (60%), Positives = 19/20 (95%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRY 92
           F EFN+L+SL+SW+E+ES++
Sbjct: 291 FSEFNELISLESWYEMESKF 310


>sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like
           domain-containing protein 2 OS=Danio rerio GN=scube2
           PE=2 SV=1
          Length = 1010

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 152 PSFFHSRSVHSCLCTCNNTNGSCVSIC 232
           P F  +++   C+ TCN+ NG C  IC
Sbjct: 185 PGFELAKNQRGCILTCNHGNGGCQHIC 211


>sp|P58294|PROK1_HUMAN Prokineticin-1 OS=Homo sapiens GN=PROK1 PE=1
           SV=1
          Length = 105

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 134 HPGDHAPSFFHSRSVHSCLCTCN 202
           HPG H   FF  R  H+C C  N
Sbjct: 61  HPGSHKVPFFRKRKHHTCPCLPN 83
tr_hit_id Q8VYA2
Definition tr|Q8VYA2|Q8VYA2_ARATH Putative carboxyphosphonoenolpyruvate mutase OS=Arabidopsis thaliana
Align length 21
Score (bit) 38.5
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918576|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B05.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8VYA2|Q8VYA2_ARATH Putative carboxyphosphonoenolpyruvate mut...    39   0.22 
tr|Q9LPL2|Q9LPL2_ARATH F24J8.7 protein OS=Arabidopsis thaliana G...    37   0.49 
tr|Q501F7|Q501F7_ARATH At1g21440 (Putative uncharacterized prote...    37   0.49 
tr|A2ZIS0|A2ZIS0_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.83 
tr|Q2QWN6|Q2QWN6_ORYSJ Carboxyvinyl-carboxyphosphonate phosphory...    35   2.4  
tr|Q0IPL3|Q0IPL3_ORYSJ Os12g0189300 protein OS=Oryza sativa subs...    35   2.4  
tr|A3CFL9|A3CFL9_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.4  
tr|B6L8I9|B6L8I9_BRAFL Putative uncharacterized protein OS=Branc...    33   7.2  

>tr|Q8VYA2|Q8VYA2_ARATH Putative carboxyphosphonoenolpyruvate mutase
           OS=Arabidopsis thaliana GN=At1g77060/F22K20.14 PE=2 SV=1
          Length = 337

 Score = 38.5 bits (88), Expect = 0.22
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYS 95
           F EFN L+ LDSWFELE+RYS
Sbjct: 306 FEEFNSLVDLDSWFELEARYS 326


>tr|Q9LPL2|Q9LPL2_ARATH F24J8.7 protein OS=Arabidopsis thaliana
           GN=F24J8.7 PE=4 SV=1
          Length = 304

 Score = 37.4 bits (85), Expect = 0.49
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYS 95
           F EFN+L++LDSW+ELE++YS
Sbjct: 274 FEEFNRLVNLDSWYELETKYS 294


>tr|Q501F7|Q501F7_ARATH At1g21440 (Putative uncharacterized protein
           At1g21440) OS=Arabidopsis thaliana GN=At1g21440 PE=2
           SV=1
          Length = 336

 Score = 37.4 bits (85), Expect = 0.49
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYS 95
           F EFN+L++LDSW+ELE++YS
Sbjct: 306 FEEFNRLVNLDSWYELETKYS 326


>tr|A2ZIS0|A2ZIS0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37721 PE=4 SV=1
          Length = 357

 Score = 36.6 bits (83), Expect = 0.83
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYSPNKS 107
           F EFN L+ LDSW ++E+R+S N S
Sbjct: 292 FAEFNNLVGLDSWLDIEARFSVNSS 316


>tr|Q2QWN6|Q2QWN6_ORYSJ Carboxyvinyl-carboxyphosphonate
           phosphorylmutase, putative, expressed OS=Oryza sativa
           subsp. japonica GN=LOC_Os12g08760 PE=4 SV=1
          Length = 356

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYSPNKST 110
           F EFN L+ LDSW ++E R+S N S+
Sbjct: 292 FTEFNNLVGLDSWLDIEVRFSVNSSS 317


>tr|Q0IPL3|Q0IPL3_ORYSJ Os12g0189300 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0189300 PE=4 SV=1
          Length = 328

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYSPNKST 110
           F EFN L+ LDSW ++E R+S N S+
Sbjct: 264 FTEFNNLVGLDSWLDIEVRFSVNSSS 289


>tr|A3CFL9|A3CFL9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_034091 PE=4 SV=1
          Length = 356

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 33  FGEFNKLMSLDSWFELESRYSPNKST 110
           F EFN L+ LDSW ++E R+S N S+
Sbjct: 292 FTEFNNLVGLDSWLDIEVRFSVNSSS 317


>tr|B6L8I9|B6L8I9_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_118458 PE=4 SV=1
          Length = 1375

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = +2

Query: 179 HSCLCT--CNNTNGSCVSICAHRGASMWQDASMFCHRQVQLGMLRVLCGGIWPHEGDALE 352
           HSC+    C ++NG C   C +   S     + +C R   L   R  C  I    GD  E
Sbjct: 301 HSCVDVNECGSSNGGCEHYCQNDRGSY----NCYCRRGYNLAANRKKCREITCPRGDVFE 356

Query: 353 PSQG 364
           P+ G
Sbjct: 357 PTHG 360