BP918577
Clone id YMU001_000115_B06
Library
Length 551
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAATGCAGGAAGTAGTTGAAACCTCCTTGATGATGCTATGTAGACGTCTATGTTTGATGC
AGTGCTTGATCATACTTTGATGGAGACGGTACCTTCATAATTTATGAGTTCTTGATCAGG
ATTTGACGAAGACACATAGCTTCTTAGTTTACGAGTTCTTCCACTGTACGATGGACGGCA
AGATTGATGATGCATTGGGGAGTTTGGTATGGTTAGAGTCTACCACACCTTGATACCTTG
GTACCTTCCTATAGTCTTTACCATGGATGATGAGTGGTCCCTTCCACTACAGTATGATTG
GGGCTTTGCAGGACTTCATAATACTACACAAAGATCGTATGTGAGGGATGCTGATAATTC
TTCAGTTGCAGGACAGGGATTTTGGGACCCATGAACTATATGAGATGCTATGGGATTGTG
TTTCATGTATGCTGAAGTCACTGTGGACTGACATTCGCTGCATCGTTGAGATGTGAATAG
AGCATCTGACAAATTTATGTTGGTGCCATGTAACCAGTGGGCTTCATGTCCCTTCTAAAT
AATGGTATCAT
■■Homology search results ■■ -
sp_hit_id A8MT65
Definition sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo sapiens
Align length 41
Score (bit) 31.2
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918577|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B06.
(551 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo sap... 31 3.5
sp|Q9XSI2|FKBP5_SAGOE FK506-binding protein 5 OS=Saguinus oedipu... 31 3.5
sp|Q25490|APLP_MANSE Apolipophorins OS=Manduca sexta PE=2 SV=1 31 3.5
sp|Q9XSH5|FKBP5_SAIBB FK506-binding protein 5 OS=Saimiri bolivie... 30 6.0
sp|Q4ZG55|GREB1_HUMAN Protein GREB1 OS=Homo sapiens GN=GREB1 PE=... 30 7.8
sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus ... 30 7.8

>sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo
sapiens PE=2 SV=2
Length = 544

Score = 31.2 bits (69), Expect = 3.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3

Query: 507 GTNINLSDALFTSQRCSECQSTVTSAYMKHNPIASHIVHGS 385
G+ + S ++FTS+ C +C S + +KHN I ++ V S
Sbjct: 201 GSKLIFSQSIFTSKHCQKCYSEI--GCLKHNSIINNYVKNS 239


>sp|Q9XSI2|FKBP5_SAGOE FK506-binding protein 5 OS=Saguinus oedipus
GN=FKBP5 PE=2 SV=2
Length = 457

Score = 31.2 bits (69), Expect = 3.5
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -3

Query: 300 QSYCSGRDHSSSMVKTIGRYQGIKVW--*TLTIPNSPMHHQSCRPSYS-GRTRKLRSYVS 130
+ + S D + V +IG+ Q IK W T+ + H C+P Y+ G T L S
Sbjct: 65 KKFDSSHDRNEPFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPKIPS 124

Query: 129 SSNP--DQELINYEG 91
++ + EL+N++G
Sbjct: 125 NATLFFEVELLNFKG 139


>sp|Q25490|APLP_MANSE Apolipophorins OS=Manduca sexta PE=2 SV=1
Length = 3305

Score = 31.2 bits (69), Expect = 3.5
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3

Query: 216 LTIPNSPMHHQSCRP-SYSGRTRKLRSYVSSSNPDQELINYEGTVSIKV 73
+TI ++P SY G+ VS+SN DQE+I+YEG ++ K+
Sbjct: 1570 MTISDAPKRGSGASTISYKGK-------VSNSNLDQEIIDYEGQINFKL 1611


>sp|Q9XSH5|FKBP5_SAIBB FK506-binding protein 5 OS=Saimiri
boliviensis boliviensis GN=FKBP5 PE=1 SV=1
Length = 457

Score = 30.4 bits (67), Expect = 6.0
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -3

Query: 309 AKPQSYCSGRDHSSSMVKTIGRYQGIKVW--*TLTIPNSPMHHQSCRPSYS-GRTRKLRS 139
A + + S D + V +IG+ Q IK W T+ + H C+P Y+ G T L
Sbjct: 62 ANGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPK 121

Query: 138 YVSSSNP--DQELINYEG 91
S++ + EL++++G
Sbjct: 122 IPSNATLFFEVELLDFKG 139


>sp|Q4ZG55|GREB1_HUMAN Protein GREB1 OS=Homo sapiens GN=GREB1 PE=2
SV=1
Length = 1949

Score = 30.0 bits (66), Expect = 7.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2

Query: 334 SLCSIMKSCKAPIIL*WKGPLIIHGKDYRKVPRYQGVVDSNHTKLPNASSILPS-IVQWK 158
S CS+ K+C+ P P++ K Y VV ++ + LP A+S+LPS V W
Sbjct: 1245 SQCSLTKACRQP-------PIVFLPKLV-----YDMVVSTDSSGLPKAASLLPSPSVMWA 1292

Query: 157 NS 152
+S
Sbjct: 1293 SS 1294


>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus
norvegicus GN=Vcan PE=2 SV=2
Length = 2738

Score = 30.0 bits (66), Expect = 7.8
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Frame = -3

Query: 225 W*TLTIPNSPMHHQSCRP-------SYSGRTRKLRSYVSSSNPDQE 109
W T P +P H S P S+ G+T K +++ SNP+ E
Sbjct: 841 WKPETYPETPEHFSSGEPDVFPTLPSHDGKTTKWSEFITESNPNTE 886


tr_hit_id B7Q7Z6
Definition tr|B7Q7Z6|B7Q7Z6_IXOSC Metalloendopeptidase OMA1, putative OS=Ixodes scapularis
Align length 74
Score (bit) 35.4
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918577|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B06.
(551 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7Q7Z6|B7Q7Z6_IXOSC Metalloendopeptidase OMA1, putative OS=Ix... 35 2.0
tr|B7S1K5|B7S1K5_9GAMM Glutamine synthetase, catalytic domain pr... 34 5.9
tr|A2Q9G9|A2Q9G9_ASPNC Contig An01c0280, complete genome. OS=Asp... 34 5.9
tr|B6K4T4|B6K4T4_SCHJP Predicted protein OS=Schizosaccharomyces ... 33 7.7
tr|Q1M362|Q1M362_RHIL3 Putative ATP-binding component of ABC tra... 33 10.0

>tr|B7Q7Z6|B7Q7Z6_IXOSC Metalloendopeptidase OMA1, putative
OS=Ixodes scapularis GN=IscW_ISCW010389 PE=4 SV=1
Length = 345

Score = 35.4 bits (80), Expect = 2.0
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +3

Query: 144 LVYEFFHCTMDGKID--------DALGSLVWLESTTP*YLGTFL*SLPWMMSGPFHYSMI 299
L +E HC ++ ++ D L SLVWL + T +PW+++ FHY++
Sbjct: 183 LAHEMAHCLLEHTLEKESLAFVLDKLTSLVWLSALTLVKGDVQAVLVPWLVTRVFHYTVF 242

Query: 300 GALQDFIILHKDRM 341
F+ L DR+
Sbjct: 243 LPQSRFMELESDRL 256


>tr|B7S1K5|B7S1K5_9GAMM Glutamine synthetase, catalytic domain
protein OS=marine gamma proteobacterium HTCC2148
GN=GPB2148_482 PE=4 SV=1
Length = 449

Score = 33.9 bits (76), Expect = 5.9
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -3

Query: 525 EAHWLHGTNINLSDALFTSQRCSECQSTVTSAYMKHNPIASHIVHGSQNPCPATEELSAS 346
E ++LHG ++L+D +FT +R TV A KH A+ + QN C + + S
Sbjct: 210 EINFLHGDALDLADQVFTFKR------TVREAAHKHGVYATFMAKPMQNECGSAMHIHQS 263

Query: 345 L 343
L
Sbjct: 264 L 264


>tr|A2Q9G9|A2Q9G9_ASPNC Contig An01c0280, complete genome.
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An01g07830 PE=4 SV=1
Length = 502

Score = 33.9 bits (76), Expect = 5.9
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3

Query: 444 TVTSAYMKHNPIASHIVHGSQNPCPAT-EELSASLTYDLCVVL*SPAKPQSYCSGRDHSS 268
T+ Y HNP AS ++HG++ P + E S SL Y +P Y S D+S
Sbjct: 36 TLQQTYSHHNPYASSMLHGNRAPGEISYEHRSHSLDY-------TPPSSSEYVSSGDYSR 88

Query: 267 SM 262
S+
Sbjct: 89 SL 90


>tr|B6K4T4|B6K4T4_SCHJP Predicted protein OS=Schizosaccharomyces
japonicus yFS275 GN=SJAG_03647 PE=4 SV=1
Length = 378

Score = 33.5 bits (75), Expect = 7.7
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = -2

Query: 523 SPLVTWHQHKFVRCSIHISTMQRMSVHSDFSIHETQSHSIS 401
SPL++ +Q++ C++ ST ++++VH + +H QS +S
Sbjct: 319 SPLLSRYQYRCNTCTLTFSTREQLAVHEESCLHSLQSSFLS 359


>tr|Q1M362|Q1M362_RHIL3 Putative ATP-binding component of ABC
transporter OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=pRL120755 PE=3 SV=1
Length = 313

Score = 33.1 bits (74), Expect = 10.0
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -1

Query: 236 VSRCGRL*PYQTPQCIINLAVHRTVEELVN*EAMCLRQILIKNS*IMKVPSPSKYD 69
+ R GRL Y TPQ I+ V+ VE + + R LI S IM P PS D
Sbjct: 210 IMRDGRLLQYDTPQEILARPVNEFVESFLGPDRAIKRLSLIVVSMIMTAPEPSNGD 265