BP918583
Clone id YMU001_000115_B12
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGCAGGAAAACATTGAAGAAGCGATATGCTACAGTCCAAAAAAGTGGTGGGGCGCGCCA
CCCGGGCCTAAGAGCACCGAAGGCAGCTCTCAAATCTTCCAATTGAAATCGCAACAAATG
ATAAATCACCCAGAACTTTCGTTAAAATGCAGCCACGTACGTCGTAGCAAGCTTTTGCCG
GGTTCGCCATGGCAGATAGTGGCGTGGTGATTGTGGGTGGCGGCCCTGCTGGCTTGCTGC
TTGCTCACCTCATTCTTGCTCAACCCCGGCCACAGCTCCTTCCCGTGCGCATTTTTGAGT
CTCGCTCCGATCCTTGCATTCCTATTCCCATGTATAAAAGCAGACAGTACTGTGTTGGCC
TTAGCGCACGTGGCCGATATGCCATAAGTAAGGTGGAGGGATTGTGGGAAGCAGTGCGAG
AAGCTGGAGTTCCTACCTCTCAGTTTGTTGTGCACACAGGATCAAAAAGCTTTCCTTTGA
AAAGAAATCCTGACAAACCCTCTCTCT
■■Homology search results ■■ -
sp_hit_id P37609
Definition sp|P37609|LCN2_LACLA Lacticin 481/lactococcin biosynthesis protein lcnDR2 OS=Lactococcus lactis subsp. lactis
Align length 83
Score (bit) 34.7
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918583|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B12.
(507 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P37609|LCN2_LACLA Lacticin 481/lactococcin biosynthesis prote... 35 0.26
sp|A4XD40|KMO_SALTO Kynurenine 3-monooxygenase OS=Salinispora tr... 34 0.45
sp|A8LVF4|KMO_SALAI Kynurenine 3-monooxygenase OS=Salinispora ar... 34 0.45
sp|Q493A2|LPXH_BLOPB UDP-2,3-diacylglucosamine hydrolase OS=Bloc... 33 1.00
sp|O14045|TPT1_SCHPO Putative tRNA 2'-phosphotransferase OS=Schi... 32 1.7
sp|Q8CB67|LRP11_MOUSE Low-density lipoprotein receptor-related p... 27 2.2
sp|A7MJY7|LPXH_ENTS8 UDP-2,3-diacylglucosamine hydrolase OS=Ente... 31 2.9
sp|Q3Z4P3|LPXH_SHISS UDP-2,3-diacylglucosamine hydrolase OS=Shig... 31 3.8
sp|Q83M28|LPXH_SHIFL UDP-2,3-diacylglucosamine hydrolase OS=Shig... 31 3.8
sp|Q0T778|LPXH_SHIF8 UDP-2,3-diacylglucosamine hydrolase OS=Shig... 31 3.8
sp|Q324Y1|LPXH_SHIBS UDP-2,3-diacylglucosamine hydrolase OS=Shig... 31 3.8
sp|Q6D2E1|LPXH_ERWCT UDP-2,3-diacylglucosamine hydrolase OS=Erwi... 31 3.8
sp|P43341|LPXH_ECOLI UDP-2,3-diacylglucosamine hydrolase OS=Esch... 31 3.8
sp|B1IZ77|LPXH_ECOLC UDP-2,3-diacylglucosamine hydrolase OS=Esch... 31 3.8
sp|A7ZXH9|LPXH_ECOHS UDP-2,3-diacylglucosamine hydrolase OS=Esch... 31 3.8
sp|Q8XCU1|LPXH_ECO57 UDP-2,3-diacylglucosamine hydrolase OS=Esch... 31 3.8
sp|A7ZIT3|LPXH_ECO24 UDP-2,3-diacylglucosamine hydrolase OS=Esch... 31 3.8
sp|Q8UC48|GPDA_AGRT5 Glycerol-3-phosphate dehydrogenase [NAD(P)+... 31 3.8
sp|Q9Z6W4|PRIM_CHLPN DNA primase OS=Chlamydia pneumoniae GN=dnaG... 30 4.9
sp|Q1RF10|LPXH_ECOUT UDP-2,3-diacylglucosamine hydrolase OS=Esch... 30 4.9
sp|Q8FK47|LPXH_ECOL6 UDP-2,3-diacylglucosamine hydrolase OS=Esch... 30 4.9
sp|Q0TKB7|LPXH_ECOL5 UDP-2,3-diacylglucosamine hydrolase OS=Esch... 30 4.9
sp|A1A8J0|LPXH_ECOK1 UDP-2,3-diacylglucosamine hydrolase OS=Esch... 30 4.9
sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 O... 30 6.5
sp|Q8Z8P7|LPXH_SALTI UDP-2,3-diacylglucosamine hydrolase OS=Salm... 30 6.5
sp|A9MW33|LPXH_SALPB UDP-2,3-diacylglucosamine hydrolase OS=Salm... 30 6.5
sp|Q5PCF3|LPXH_SALPA UDP-2,3-diacylglucosamine hydrolase OS=Salm... 30 6.5
sp|A9MLB0|LPXH_SALAR UDP-2,3-diacylglucosamine hydrolase OS=Salm... 30 6.5
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide syntha... 30 8.4
sp|Q3B0Z0|ARLY_SYNS9 Argininosuccinate lyase OS=Synechococcus sp... 30 8.4

>sp|P37609|LCN2_LACLA Lacticin 481/lactococcin biosynthesis protein
lcnDR2 OS=Lactococcus lactis subsp. lactis GN=lcnDR2
PE=4 SV=1
Length = 922

Score = 34.7 bits (78), Expect = 0.26
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = -2

Query: 374 ATCAKANT-VLSAFIHGNRNARIGARLKNAHGKELWPGLSKNEVSKQQA-SRAATHNHHA 201
A+ A N+ + +AF+HG + + LK H ELW + +++ + SR ++ +
Sbjct: 721 ASYAHGNSGIATAFVHGYKVTKNEKYLKIFH--ELWNLENSSKLRRGWTDSRKVDSSYSS 778

Query: 200 TICHGEPGKSLLRRTWLHFNESS 132
CHG G+++ R W+ N+++
Sbjct: 779 QWCHGASGQAIARMEWITVNKTA 801


>sp|A4XD40|KMO_SALTO Kynurenine 3-monooxygenase OS=Salinispora
tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
GN=kmo PE=3 SV=1
Length = 453

Score = 33.9 bits (76), Expect = 0.45
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVEGLWEAVREAGVPTSQFVVHT 458
V +FE R DP + + R +GLSARG A+ V GL V + VP VVH+
Sbjct: 31 VDVFERRPDPRSALGRPEGRSINLGLSARGMRALDGV-GLLADVLKHSVPMRDRVVHS 87


>sp|A8LVF4|KMO_SALAI Kynurenine 3-monooxygenase OS=Salinispora
arenicola (strain CNS-205) GN=kmo PE=3 SV=1
Length = 454

Score = 33.9 bits (76), Expect = 0.45
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVEGLWEAVREAGVPTSQFVVHT 458
V IFE R DP + + R +GLSARG A+ V GL V + VP VVH+
Sbjct: 31 VDIFERRPDPRSALAGPEGRSINLGLSARGMRALDGV-GLLADVLKHSVPMRDRVVHS 87


>sp|Q493A2|LPXH_BLOPB UDP-2,3-diacylglucosamine hydrolase
OS=Blochmannia pennsylvanicus (strain BPEN) GN=lpxH PE=3
SV=1
Length = 250

Score = 32.7 bits (73), Expect = 1.00
Identities = 22/84 (26%), Positives = 33/84 (39%)
Frame = -2

Query: 398 LHLTYGISATCAKANTVLSAFIHGNRNARIGARLKNAHGKELWPGLSKNEVSKQQASRAA 219
LH+ + + FIHGN + +G R A G L LS N+V K + +
Sbjct: 55 LHINIAKALKALNQRRISCYFIHGNHDFLLGQRYARACGMTL---LSSNQVLKLASGKKI 111

Query: 218 THNHHATICHGEPGKSLLRRTWLH 147
H +C + L R+ H
Sbjct: 112 IILHGDILCANDNSYQLFRKYLRH 135


>sp|O14045|TPT1_SCHPO Putative tRNA 2'-phosphotransferase
OS=Schizosaccharomyces pombe GN=SPAC2C4.12c PE=2 SV=1
Length = 361

Score = 32.0 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2

Query: 296 KNAHG--KELWPGLSKNEVSKQQASRAATHNHHATICHGEPG 177
K HG KELWP +SK +S+ + + H H AT +G+PG
Sbjct: 130 KVVHGTKKELWPVISKQGLSRMKRN----HIHCATGLYGDPG 167


>sp|Q8CB67|LRP11_MOUSE Low-density lipoprotein receptor-related
protein 11 OS=Mus musculus GN=Lrp11 PE=2 SV=1
Length = 483

Score = 26.6 bits (57), Expect(2) = 2.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2

Query: 215 GWRPCWLAACSPHSCS 262
GWR C A CS SCS
Sbjct: 112 GWRQCVTACCSEPSCS 127



Score = 23.9 bits (50), Expect(2) = 2.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGR 377
V + + P +P PM R Y +ARGR
Sbjct: 128 VAVVQLPRGPSVPAPMPAPRCYLFNCTARGR 158


>sp|A7MJY7|LPXH_ENTS8 UDP-2,3-diacylglucosamine hydrolase
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lpxH
PE=3 SV=1
Length = 240

Score = 31.2 bits (69), Expect = 2.9
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -2

Query: 407 PQSLHLTYGISATCAKANTVLSAFIHGNRNARIGARLKNAHGKELWPGLSKNEVSKQQAS 228
P+ LH + + V FIHGNR+ +G R G +L P E
Sbjct: 52 PEPLHREIAAALRALVQSGVPCYFIHGNRDFLLGRRFARESGMQLLP----EEQVLDLYG 107

Query: 227 RAATHNHHATICHGEPG----KSLLRRTWL 150
R H T+C + G ++ + + WL
Sbjct: 108 RRVLIMHGDTLCTDDAGYQAFRAKVHKPWL 137


>sp|Q3Z4P3|LPXH_SHISS UDP-2,3-diacylglucosamine hydrolase
OS=Shigella sonnei (strain Ss046) GN=lpxH PE=3 SV=1
Length = 240

Score = 30.8 bits (68), Expect = 3.8
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = -2

Query: 407 PQSLHLTYGISATCAKANTVLSAFIHGNRNARIGARLKNAHGKELWPGLSKNEVSKQQAS 228
P LH + + V FIHGNR+ +G R G L P E +
Sbjct: 52 PNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLP----EEKVLELYG 107

Query: 227 RAATHNHHATICHGEPG----KSLLRRTWL 150
R H T+C + G ++ + + WL
Sbjct: 108 RRVLIMHGDTLCTDDAGYQAFRAKVHKPWL 137


>sp|Q83M28|LPXH_SHIFL UDP-2,3-diacylglucosamine hydrolase
OS=Shigella flexneri GN=lpxH PE=3 SV=1
Length = 240

Score = 30.8 bits (68), Expect = 3.8
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = -2

Query: 407 PQSLHLTYGISATCAKANTVLSAFIHGNRNARIGARLKNAHGKELWPGLSKNEVSKQQAS 228
P LH + + V FIHGNR+ +G R G L P E +
Sbjct: 52 PNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLP----EEKVLELYG 107

Query: 227 RAATHNHHATICHGEPG----KSLLRRTWL 150
R H T+C + G ++ + + WL
Sbjct: 108 RRVLIMHGDTLCTDDAGYQAFRAKVHKPWL 137


>sp|Q0T778|LPXH_SHIF8 UDP-2,3-diacylglucosamine hydrolase
OS=Shigella flexneri serotype 5b (strain 8401) GN=lpxH
PE=3 SV=1
Length = 240

Score = 30.8 bits (68), Expect = 3.8
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = -2

Query: 407 PQSLHLTYGISATCAKANTVLSAFIHGNRNARIGARLKNAHGKELWPGLSKNEVSKQQAS 228
P LH + + V FIHGNR+ +G R G L P E +
Sbjct: 52 PNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLP----EEKVLELYG 107

Query: 227 RAATHNHHATICHGEPG----KSLLRRTWL 150
R H T+C + G ++ + + WL
Sbjct: 108 RRVLIMHGDTLCTDDAGYQAFRAKVHKPWL 137


tr_hit_id A9TW57
Definition tr|A9TW57|A9TW57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 82
Score (bit) 118.0
E-value 2.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918583|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_B12.
(507 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TW57|A9TW57_PHYPA Predicted protein OS=Physcomitrella paten... 118 2e-25
tr|B7GBB4|B7GBB4_PHATR Predicted protein OS=Phaeodactylum tricor... 50 6e-05
tr|Q4C3M3|Q4C3M3_CROWT Flavoprotein monooxygenase OS=Crocosphaer... 41 0.037
tr|A0ZAB5|A0ZAB5_NODSP VioC monooxygenase OS=Nodularia spumigena... 39 0.11
tr|Q828Q4|Q828Q4_STRAW Putative penicillin acylase OS=Streptomyc... 37 0.41
tr|B0C320|B0C320_ACAM1 Kynurenine 3-monooxygenase, putative OS=A... 37 0.41
tr|A5DUB6|A5DUB6_LODEL Predicted protein OS=Lodderomyces elongis... 34 4.6
tr|A2AFW5|A2AFW5_MOUSE Protein tyrosine phosphatase, mitochondri... 33 6.0
tr|B3N5G4|B3N5G4_DROER GG10392 OS=Drosophila erecta GN=GG10392 P... 33 6.0

>tr|A9TW57|A9TW57_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_98082 PE=4 SV=1
Length = 464

Score = 118 bits (295), Expect = 2e-25
Identities = 50/82 (60%), Positives = 68/82 (82%)
Frame = +3

Query: 261 QPRPQLLPVRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVEGLWEAVREAGVPTS 440
+P+P LPVR+FE+R+DP P+P+YK RQYCVGLSARG+ I +V+GLW+ V + G+P+S
Sbjct: 29 KPKPHFLPVRVFEARNDPRTPLPLYKERQYCVGLSARGQDGIKRVDGLWDEVEKRGMPSS 88

Query: 441 QFVVHTGSKSFPLKRNPDKPSL 506
QFV+HTG+++ LKRNP KPSL
Sbjct: 89 QFVLHTGNRAIALKRNPGKPSL 110


>tr|B7GBB4|B7GBB4_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_49644 PE=4 SV=1
Length = 516

Score = 50.1 bits (118), Expect = 6e-05
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVE-GLWEAVREAGVPTSQFVVHTG 461
V+IFE+RS P P + + R Y +G+ RGR AI V+ GLW V +AG + +F +H G
Sbjct: 101 VKIFEARSRPQ-PDSLEQGRAYALGVGIRGRTAIQAVDDGLWNVVEQAGFGSQRFQLHAG 159

Query: 462 SKSFPLKRNPD 494
L+ D
Sbjct: 160 PLKMTLRDEQD 170


>tr|Q4C3M3|Q4C3M3_CROWT Flavoprotein monooxygenase OS=Crocosphaera
watsonii GN=CwatDRAFT_3879 PE=4 SV=1
Length = 425

Score = 40.8 bits (94), Expect = 0.037
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVEGLWEAVREAGVPTSQFVVHT-- 458
+ I+ESR DP + P + R + + L ARGR A+SK+E L E + + G ++H+
Sbjct: 29 IEIYESRQDPRLSSPDTQ-RTFPLALQARGRQALSKIENLEEKIAQKGTFCQGTLLHSQK 87

Query: 459 -GSKSFPLKR 485
++S P K+
Sbjct: 88 GKTRSIPRKK 97


>tr|A0ZAB5|A0ZAB5_NODSP VioC monooxygenase OS=Nodularia spumigena
CCY 9414 GN=N9414_04770 PE=4 SV=1
Length = 432

Score = 39.3 bits (90), Expect = 0.11
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVEGLWEAVREAGVPTSQFVVH 455
+ I+E RSDP I I KSR + + L+ RG A+ ++EGL AV+ V + + H
Sbjct: 30 INIYERRSDPRI-ISFSKSRTFPISLNERGMSALRQIEGLEAAVKAVSVEMTGTLFH 85


>tr|Q828Q4|Q828Q4_STRAW Putative penicillin acylase OS=Streptomyces
avermitilis GN=pacB3 PE=4 SV=1
Length = 929

Score = 37.4 bits (85), Expect = 0.41
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3

Query: 360 LSARGRYAISKVEGLWEAVREAGVPTSQFVVHTGSKSFPLKRNPDKP 500
++A+ +Y +++ +WE+ RE P + VH G +SFP PD P
Sbjct: 311 IAAQSKYGVTEGTKVWESFRERNDPEAVLTVHNG-ESFPYASKPDSP 356


>tr|B0C320|B0C320_ACAM1 Kynurenine 3-monooxygenase, putative
OS=Acaryochloris marina (strain MBIC 11017) GN=kmo PE=4
SV=1
Length = 425

Score = 37.4 bits (85), Expect = 0.41
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3

Query: 285 VRIFESRSDPCIPIPMYKSRQYCVGLSARGRYAISKVEGLWEAVREAGVPTSQFVVHTGS 464
V +FE R+DP + P ++R + + L RG+ A+ + GL +AV + + ++H S
Sbjct: 30 VSVFEQRADPRLT-PQVQNRTFPISLQERGQQALRSISGLEQAVADRSTVCNGTIMHQAS 88


>tr|A5DUB6|A5DUB6_LODEL Predicted protein OS=Lodderomyces
elongisporus GN=LELG_00952 PE=4 SV=1
Length = 150

Score = 33.9 bits (76), Expect = 4.6
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = -2

Query: 434 RNSSFSHCFPQSLHLTYGISATCAKANTVLSAFIHGNRNARIGARLKNAHGKELWPGLSK 255
RNS+ S C ++L+L VL F+HG + R ++ N H WP + K
Sbjct: 52 RNSTVSFCVIENLNLHV----------QVLHFFLHGKKKKRQSPKMFNEH----WPNMQK 97

Query: 254 NEVSKQQASRAATHNHHAT 198
+K + + N +T
Sbjct: 98 RNKTKNKKQKTKNKNSTST 116


>tr|A2AFW5|A2AFW5_MOUSE Protein tyrosine phosphatase, mitochondrial
1 OS=Mus musculus GN=Ptpmt1 PE=4 SV=1
Length = 211

Score = 33.5 bits (75), Expect = 6.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2

Query: 176 CRVRHGR*WRGDCGWRPCWLAACSPHSCST 265
C R G WR GWRP W S CST
Sbjct: 113 CAWRGGAGWRPPRGWRPAWPGCSSTRRCST 142


>tr|B3N5G4|B3N5G4_DROER GG10392 OS=Drosophila erecta GN=GG10392 PE=4
SV=1
Length = 337

Score = 33.5 bits (75), Expect = 6.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3

Query: 238 SKPAGPPPTITTPLSAMANPAKACYDVRGCILTKVLGDLSFVAISIG 98
+KPA PP I + P K + G IL KV+G ++ + IG
Sbjct: 47 AKPAAPPGAIAAKPDDKSKPQKTILEEHGIILGKVIGTGNYAKVKIG 93