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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918584
Clone id YMU001_000115_C01
Library
Length 562
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAAAGGTTGGCCCTCCCTCTTTCAGACCGAGAGCTGACTTCACACCCTTGCCGGGAGCAA
TCACAGCCCTGTCAAGCCCAGTGGGCTCGGCAGGATCGTCCACAAACTTTCCTCGGTCAC
CAAGAGCTCCAATAGCACCCAGCAATGTAAACAAAATGAAGAAGAGGAGAAGGGGCTCTG
TCTCAGTTAGTGGCAACCCTGTCTCGAAGTCGAATTGAGCAAGAGTTCCCTTTCCTGTGA
TGGCCTCACCTAGAATAGAGGCCGCAAACCCAAGCATGGCGACTCGGCCAACAAAGAGCT
CGTTTTGCTTGGTGAAGCCAATTCCACCGGAGGTCCCGAAAATGCCATCCTCAACCTTTC
CCTTCGTCTTTGGGGCAGGCTTGGACCCAGTTGTCTTCTTGGGAGTCTTGGTGCCAAAGA
GGGCAACTGTCTTCAAGGGAGAGGACTGGAAAACCCTGGAGGAATGCAGGGGAGCGAAGG
AGAGGCCGCCGGCCTGCGACGCTGCAATACGGGAGCCTGCCTGGAAATTGGCGAAGGAGG
AAGCGAGCGCTGAGGAGCGGGA
■■Homology search results ■■ -
sp_hit_id Q9SMB4
Definition sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum
Align length 118
Score (bit) 126.0
E-value 6.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918584|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_C01.
         (562 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...   126   6e-29
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...   124   2e-28
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...   121   2e-27
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...   116   7e-26
sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...   116   9e-26
sp|O43711|TLX3_HUMAN T-cell leukemia homeobox protein 3 OS=Homo ...    37   0.066
sp|O55144|TLX3_MOUSE T-cell leukemia homeobox protein 3 OS=Mus m...    37   0.086
sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2    37   0.086
sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17 OS=S...    36   0.11 
sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VR...    36   0.11 
sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp....    36   0.11 
sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BI...    36   0.15 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.20 
sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16 OS=Neur...    35   0.25 
sp|Q01W31|IF2_SOLUE Translation initiation factor IF-2 OS=Soliba...    34   0.43 
sp|Q9ET54|PALLD_MOUSE Palladin OS=Mus musculus GN=Palld PE=1 SV=2      34   0.56 
sp|Q8WX93|PALLD_HUMAN Palladin OS=Homo sapiens GN=PALLD PE=1 SV=2      34   0.56 
sp|Q14244|MAP7_HUMAN Ensconsin OS=Homo sapiens GN=MAP7 PE=1 SV=1       34   0.56 
sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activate...    34   0.56 
sp|Q9D219|BCL9_MOUSE B-cell CLL/lymphoma 9 protein OS=Mus muscul...    34   0.56 
sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE...    33   0.73 
sp|P59114|PCIF1_MOUSE Phosphorylated CTD-interacting factor 1 OS...    33   0.73 
sp|P30599|CHS2_USTMA Chitin synthase 2 OS=Ustilago maydis GN=CHS...    33   0.73 
sp|Q5R8V9|NIPA_PONAB Nuclear-interacting partner of ALK OS=Pongo...    33   0.96 
sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN...    33   1.2  
sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated ...    33   1.2  
sp|Q9H4Z3|PCIF1_HUMAN Phosphorylated CTD-interacting factor 1 OS...    32   1.6  
sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN...    32   1.6  
sp|Q80YV2|NIPA_MOUSE Nuclear-interacting partner of ALK OS=Mus m...    32   2.1  
sp|Q13118|KLF10_HUMAN Krueppel-like factor 10 OS=Homo sapiens GN...    32   2.1  

>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score =  126 bits (317), Expect = 6e-29
 Identities = 71/118 (60%), Positives = 76/118 (64%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGAL DRGKF+DDPA PTGLD+AVI PGKG KSALGL EGGP F
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGGPLF 197



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score =  124 bits (312), Expect = 2e-28
 Identities = 70/118 (59%), Positives = 75/118 (63%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVDDP  PTGL++AVI PGK  KSALGL EGGP F
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLF 199



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score =  121 bits (304), Expect = 2e-27
 Identities = 68/118 (57%), Positives = 75/118 (63%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRG+F+DDPA  TGL++AVI PGK  KSALGL EGGP F
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGGPLF 199



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score =  116 bits (291), Expect = 7e-26
 Identities = 68/118 (57%), Positives = 75/118 (63%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TK NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE GP F
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLF 187



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score =  116 bits (290), Expect = 9e-26
 Identities = 76/166 (45%), Positives = 89/166 (53%)
 Frame = -1

Query: 499 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXKVEDXXXXXXXXX 320
           S    L F+PL SS    S+  KT+ALF                    VED         
Sbjct: 37  SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 319 XXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX 140
             TK+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +                       
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 139 GAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
           GAIGALGDRG+FVD+P   TGL++AVI PGK V+SALGLK  GP F
Sbjct: 153 GAIGALGDRGRFVDEPT--TGLEKAVIPPGKDVRSALGLKTKGPLF 196



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|O43711|TLX3_HUMAN T-cell leukemia homeobox protein 3 OS=Homo
           sapiens GN=TLX3 PE=1 SV=3
          Length = 291

 Score = 37.0 bits (84), Expect = 0.066
 Identities = 28/98 (28%), Positives = 39/98 (39%)
 Frame = +3

Query: 9   GPPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSV 188
           GPP  RP A +  LP +   L +P   AGS      S    +AP+ V ++   R      
Sbjct: 46  GPPGGRPGATYPSLPASFAGLGAPFEDAGS-----YSVNLSLAPAGVIRVPAHR------ 94

Query: 189 SGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSS 302
                        P P    P + +A P+M + PT SS
Sbjct: 95  -------------PLPGAVPPPLPSALPAMPSVPTVSS 119


>sp|O55144|TLX3_MOUSE T-cell leukemia homeobox protein 3 OS=Mus
           musculus GN=Tlx3 PE=2 SV=1
          Length = 291

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 28/98 (28%), Positives = 39/98 (39%)
 Frame = +3

Query: 9   GPPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSV 188
           GPP  RP A +  LP +   L +P   AGS      S    +AP+ V ++   R      
Sbjct: 46  GPPGGRPGAAYPSLPASFAGLGAPFEDAGS-----YSVNLSLAPAGVIRVPAHR------ 94

Query: 189 SGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSS 302
                        P P    P + +A P+M + PT SS
Sbjct: 95  -------------PLPGAVPPPLPSALPAMPSVPTVSS 119


>sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2
          Length = 591

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
 Frame = +3

Query: 15  PSFRPRADFTPLPGAI-TALSSPVGSAGSS--TNFPRSPRA-PIAPSNVNKMKKRRRGSV 182
           PS  P +  +PL G + T LS P  ++ SS  T+F  SP A P+  +  + +     G++
Sbjct: 106 PSATPGSLMSPLTGTLSTLLSGPAPTSQSSPLTSFLTSPIAGPLTGTLASSLGLPSTGTL 165

Query: 183 ---SVSGNPVSKSN*ARVPFPVMASPRIEAANP---SMATRPTKSSFCLVKP----IPPE 332
              S+   PV+ S  + +  PVM +  +  ++P   S AT P  S   L  P    + PE
Sbjct: 166 TPSSLVAGPVAMSQSSPLIAPVMGTVAVSLSSPLLSSTATPPGVSQNLLANPMSNLVLPE 225

Query: 333 VPKM 344
            P++
Sbjct: 226 APRL 229


>sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17
            OS=Schizosaccharomyces pombe GN=SPAC23A1.17 PE=1 SV=1
          Length = 1611

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 41/141 (29%), Positives = 52/141 (36%), Gaps = 6/141 (4%)
 Frame = +3

Query: 12   PPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPR-APIAPSNVNKMKKRRRGSVSV 188
            PP   P AD  P+P  + + + PV    S+   P+S   AP AP  V           + 
Sbjct: 1022 PPVPLPSADAPPIP--VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079

Query: 189  SGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSSFCLVKPIP-----PEVPKMPSS 353
            SG P        VP P    P      PS+A  P       V P+P     P VPK   +
Sbjct: 1080 SGAP-------PVPAPSGIPP---VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129

Query: 354  TFPFVFGAGLDPVVFLGVLVP 416
              P    +G  PV    V  P
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAP 1150



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = +3

Query: 12   PPSFRPRADFTPLPG---AITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSV 182
            PP  +P     P+P    A+  + +P G+         +P  P+ PS    + K      
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV-PSGAPPVPKP----- 1145

Query: 183  SVSGNPV-SKSN*ARVPFPVMASPRIEAANPSMATRPTKSSFCLVKPIPP--EVPKMP 347
            SV+  PV + S    VP P +A+P + A  PS    P       V P+PP  E P +P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPA--PSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201


>sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VRP1
           PE=1 SV=2
          Length = 817

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
 Frame = +3

Query: 69  LSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSVSGNPVSK---SN*ARVPFPV 239
           +SS  GS+G+ ++   S  AP  P     M   + G +   G P  K   +N +  P P 
Sbjct: 62  VSSASGSSGTVSSKGPSMSAPPIPG----MGAPQLGDILAGGIPKLKHINNNASTKPSPS 117

Query: 240 MASPRIEAANPSMATRPTKSSFCLVKPIPPEVPKMPSSTFPFVFGAGLDPV 392
            ++P I  A PS+A  P  ++     P  P +P   +   P +  +   P+
Sbjct: 118 ASAPPIPGAVPSVAAPPIPNAPLSPAPAVPSIPSSSAPPIPDIPSSAAPPI 168
tr_hit_id Q2LAH0
Definition tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana
Align length 118
Score (bit) 128.0
E-value 2.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918584|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_C01.
         (562 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...   128   2e-28
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...   125   2e-27
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...   125   2e-27
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...   120   5e-26
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...   120   5e-26
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...   119   1e-25
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...   119   1e-25
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...   118   2e-25
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...   117   6e-25
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...   116   7e-25
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...   116   7e-25
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...   115   2e-24
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...   114   5e-24
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...   114   5e-24
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...   113   8e-24
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...   113   8e-24
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...   113   8e-24
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...   113   8e-24
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...   113   8e-24
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...   112   1e-23
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...   112   1e-23
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...   112   2e-23
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...   110   4e-23
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...   109   1e-22
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...   109   1e-22
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...   100   7e-20
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    58   4e-07
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...    58   4e-07
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   7e-07
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   9e-07

>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score =  128 bits (321), Expect = 2e-28
 Identities = 71/118 (60%), Positives = 76/118 (64%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKF+DDP  PTGLD+AVI PGKG KSALGL EGGP F
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGGPLF 200



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score =  125 bits (313), Expect = 2e-27
 Identities = 70/118 (59%), Positives = 75/118 (63%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKF+DDP   TGLD+AVI PGKG KSALGL EGGP F
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSALGLSEGGPLF 197



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score =  125 bits (313), Expect = 2e-27
 Identities = 70/118 (59%), Positives = 76/118 (64%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVDDPA PTGL++AVI PG+  KSALGL EGGP F
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGGPLF 199



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score =  120 bits (301), Expect = 5e-26
 Identities = 87/192 (45%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
 Frame = -1

Query: 547 LASSFANFQAGSRIAASQAGGLS-FAPLHSSRVFQSSP---------LKTVALFXXXXXX 398
           +A S     A   +AA+    L    P   SR+  S P         +KTVALF      
Sbjct: 1   MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGRAVSVKTVALFGRSKTK 60

Query: 397 XXXXXXXXXXXXXKVEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLA 218
                        K ED           TK+NELFVGRVAMLGFAASILGEAITGKG LA
Sbjct: 61  AAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGILA 120

Query: 217 QFDXXXXXXXXXXXXXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVK 38
           Q +                       GAIGALGDRG FVDD    TGLD+AVIAPGKG +
Sbjct: 121 QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDD-QPVTGLDKAVIAPGKGFR 179

Query: 37  SALGLKEGGPTF 2
           SALGL EGGP F
Sbjct: 180 SALGLSEGGPLF 191



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score =  120 bits (301), Expect = 5e-26
 Identities = 87/192 (45%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
 Frame = -1

Query: 547 LASSFANFQAGSRIAASQAGGLS-FAPLHSSRVFQSSP---------LKTVALFXXXXXX 398
           +A S     A   +AA+    L    P   SR+  S P         +KTVALF      
Sbjct: 1   MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGRAVSVKTVALFGRSKTK 60

Query: 397 XXXXXXXXXXXXXKVEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLA 218
                        K ED           TK+NELFVGRVAMLGFAASILGEAITGKG LA
Sbjct: 61  AAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGILA 120

Query: 217 QFDXXXXXXXXXXXXXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVK 38
           Q +                       GAIGALGDRG FVDD    TGLD+AVIAPGKG +
Sbjct: 121 QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDD-QPVTGLDKAVIAPGKGFR 179

Query: 37  SALGLKEGGPTF 2
           SALGL EGGP F
Sbjct: 180 SALGLSEGGPLF 191



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score =  119 bits (298), Expect = 1e-25
 Identities = 68/118 (57%), Positives = 76/118 (64%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGGP F
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGGPLF 200



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 32/75 (42%), Positives = 36/75 (48%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXGAI 131
           K NELFVGR+A LG A S++GE ITGKG LAQ +                        AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 130 GALGDRGKFVDDPAE 86
                 GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score =  119 bits (298), Expect = 1e-25
 Identities = 68/118 (57%), Positives = 76/118 (64%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TKQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGGP F
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGGPLF 200



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 32/75 (42%), Positives = 36/75 (48%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXGAI 131
           K NELFVGR+A LG A S++GE ITGKG LAQ +                        AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 130 GALGDRGKFVDDPAE 86
                 GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score =  118 bits (296), Expect = 2e-25
 Identities = 86/196 (43%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
 Frame = -1

Query: 562 SRSSALASSFANFQAGSRIAASQAGGLS--------FAPLHSSRVFQSSP-LKTVALFXX 410
           S +S  AS   N +    +   QA GL         F PL ++    SS    T ALF  
Sbjct: 9   SSTSVSASHVVNLKRDHPLLHFQAQGLKPKPFSHFLFNPLSNAVAASSSKAFTTFALFKS 68

Query: 409 XXXXXXXXXXXXXXXXXKVEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGK 230
                             VED           TKQNELFVGRVAM+GFAAS+LGEAITGK
Sbjct: 69  KTKAAPKKAEPKPKPK--VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGK 126

Query: 229 GTLAQFDXXXXXXXXXXXXXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPG 50
           G LAQ +                       GAIGALGDRG+FVD+P  PTG++ AVI PG
Sbjct: 127 GILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEP--PTGVEGAVIPPG 184

Query: 49  KGVKSALGLKEGGPTF 2
           KGV+ ALGLKEGGP F
Sbjct: 185 KGVRGALGLKEGGPLF 200



 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237


>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
           OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
          Length = 279

 Score =  117 bits (292), Expect = 6e-25
 Identities = 70/118 (59%), Positives = 72/118 (61%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TK NELFVGRVAMLGFAASILGEA+TGKGTLAQFD           
Sbjct: 85  VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETE 144

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVDD A   GLD  +I PGKGVK ALGL E GP F
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDD-APVAGLDSTIIKPGKGVKGALGLNEKGPVF 201



 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A +I+GE ITGKG LAQ +
Sbjct: 205 KSNELFVGRLAQLGIAFAIIGEIITGKGALAQLN 238


>tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein
           (At1g44575/T18F15) OS=Arabidopsis thaliana PE=2 SV=1
          Length = 265

 Score =  116 bits (291), Expect = 7e-25
 Identities = 68/118 (57%), Positives = 75/118 (63%)
 Frame = -1

Query: 355 VEDXXXXXXXXXXXTKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 176
           VED           TK NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 175 XXXXXXXXXXXXGAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTF 2
                       GAIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE GP F
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLF 187



 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = -1

Query: 310 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 209
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224