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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918596
Clone id YMU001_000115_D01
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGACAAGGAGACCCCCCACAAACAGAAAGCATGGGCCCCAAGGCTCCTCCGCAATTACC
ACCATTAAGTCCACCTGGACCTTATTCTGGTCTCTCAAAGTCGGCAAGCGTTCATGTCAC
TCAACCCCATCACCACTTCGACAGCGAAAGTCTCTCTGAGTTTATAGGGAGGAGTGTAAA
AACACCCATTTCAGAAAAAGAGCTGGAGCATTATGCTAAGTCTCCGCCTCGGCCTGGAGC
AAACAAACCATGGTTTTACTCAGGCAGCATTAATGCATTGAGGAGTCCTCCTAGCAGAGA
TTAATTACCATTTTTGCCCTTCCAACATCGAAGAGTGTTGTTGCGTTGAGCTAATGCATT
ATGCTGCCCCTGCAGTTGAAAATTTTTGTTAACCAGTGTGGATATCCTGTACATTATTAT
GTGGAGTGTTCACTATGATTGTAGGAAAGGAAGACTACCACTTGATCCTTTTAATGTATG
GGGTGCTCAAACCTGGTGTCACAATGCCGAAGGCGTCTATGTAATATCAGGATTG
■■Homology search results ■■ -
sp_hit_id Q811P8
Definition sp|Q811P8|RICS_MOUSE Rho/Cdc42/Rac GTPase-activating protein RICS OS=Mus musculus
Align length 61
Score (bit) 32.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918596|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_D01.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q811P8|RICS_MOUSE Rho/Cdc42/Rac GTPase-activating protein RIC...    32   1.9  
sp|A6WFJ3|PURA_KINRD Adenylosuccinate synthetase OS=Kineococcus ...    30   7.3  
sp|Q02891|MCFS1_YEAST Medium-chain fatty acid ethyl ester syntha...    30   7.4  

>sp|Q811P8|RICS_MOUSE Rho/Cdc42/Rac GTPase-activating protein RICS
            OS=Mus musculus GN=Rics PE=1 SV=2
          Length = 2089

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 122  QPHHHFDSESLSEFIGRSVKTPISEKELEHYAKSPPRPGANKPWFYSGS-INALRSPPSR 298
            +P H   S   + +  R     +  K + +YA  PPRP AN   ++SG+  N +  PP+ 
Sbjct: 1682 RPLHRLSSRDFAFYNPR-----LQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMPPTA 1736

Query: 299  D 301
            D
Sbjct: 1737 D 1737


>sp|A6WFJ3|PURA_KINRD Adenylosuccinate synthetase OS=Kineococcus
           radiotolerans (strain ATCC BAA-149 / DSM 14245 /
           SRS30216) GN=purA PE=3 SV=1
          Length = 428

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 432 TMIVGKEDYHLILLMYGVLKPGVT 503
           T++VG E Y L LL  G+L PGVT
Sbjct: 42  TVVVGDEKYALHLLPSGILTPGVT 65


>sp|Q02891|MCFS1_YEAST Medium-chain fatty acid ethyl ester
           synthase/esterase 1 OS=Saccharomyces cerevisiae GN=EEB1
           PE=1 SV=1
          Length = 456

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 131 HHFDSESLSEFIGRSVKTPISEKELEHYAKSPPRPGANKPWFYS 262
           +H  S +L++F+ R+VK  ++E ++    +   +P   KP FY+
Sbjct: 296 NHIFSRTLTQFLTRTVKVNMNELQVPENFEVSHKPTVEKPVFYT 339
tr_hit_id Q0CNA7
Definition tr|Q0CNA7|Q0CNA7_ASPTN Putative uncharacterized protein OS=Aspergillus terreus (strain NIH 2624)
Align length 55
Score (bit) 37.0
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918596|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_D01.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0CNA7|Q0CNA7_ASPTN Putative uncharacterized protein OS=Asper...    37   0.65 
tr|Q0INH7|Q0INH7_ORYSJ Os12g0450200 protein OS=Oryza sativa subs...    36   1.4  
tr|A5G9N9|A5G9N9_GEOUR Sensor protein OS=Geobacter uraniireducen...    35   2.5  
tr|Q5KJ90|Q5KJ90_CRYNE Transcription factor, putative OS=Cryptoc...    35   2.5  
tr|B8BR95|B8BR95_THAPS Predicted protein OS=Thalassiosira pseudo...    35   3.2  
tr|Q4Q0C6|Q4Q0C6_LEIMA Ubiquitin-protein ligase, putative OS=Lei...    34   4.1  
tr|Q2ULH9|Q2ULH9_ASPOR Kinesin-like protein OS=Aspergillus oryza...    34   4.2  
tr|B8N221|B8N221_ASPFL Kinesin family protein OS=Aspergillus fla...    34   4.2  
tr|A2QSG5|A2QSG5_ASPNC Remark: Xkid is responsible for the polar...    34   5.5  
tr|B4MNP0|B4MNP0_DROWI GK19618 OS=Drosophila willistoni GN=GK196...    33   7.2  

>tr|Q0CNA7|Q0CNA7_ASPTN Putative uncharacterized protein
           OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_04827
           PE=4 SV=1
          Length = 848

 Score = 37.0 bits (84), Expect = 0.65
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +2

Query: 128 HHHFDSESLSEFIGRSVKTPISEKELEHYAKSP---PRPGANKPWFYSGSINALR 283
           H H+DSE L       + T +SEK L    K+P   P PG   PW  S  +++ R
Sbjct: 306 HQHWDSEPLYTMPPAELLTELSEKYLAFLPKAPVVDPVPGTELPWMSSNGVDSER 360


>tr|Q0INH7|Q0INH7_ORYSJ Os12g0450200 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0450200 PE=4 SV=1
          Length = 3154

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 16  PTNRKHGPQGSSAITTIKSTWTLFWSLKVGKRSCHSTPSP 135
           P+   +    + A+TT+   W +  SL + +R+C STPSP
Sbjct: 240 PSKMLYAETATGAVTTLSGFWDVSSSLLINRRACFSTPSP 279


>tr|A5G9N9|A5G9N9_GEOUR Sensor protein OS=Geobacter uraniireducens
           (strain Rf4) GN=Gura_4364 PE=4 SV=1
          Length = 517

 Score = 35.0 bits (79), Expect = 2.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 410 YIIMWSVHYDCRKGRLPLDPFNVWGAQTWCHNAEGVYVI 526
           Y+ +W+  Y   +G L + PFNV G   W +  +G Y I
Sbjct: 122 YMYVWASSYKHDRGTLTMHPFNVEGVNEWNYQVKGRYTI 160


>tr|Q5KJ90|Q5KJ90_CRYNE Transcription factor, putative
           OS=Cryptococcus neoformans GN=CNBD6000 PE=4 SV=1
          Length = 773

 Score = 35.0 bits (79), Expect = 2.5
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
 Frame = +2

Query: 101 SASVHVTQPHHHFDSESLSEFIGRSVKTPISEKELEHYAKSPPRP----------GANKP 250
           S SV  T  H H D  S+    G+   +  +     H  ++PP P           AN P
Sbjct: 131 SGSVSATHNHSHVDQSSMQAATGQQFLSNSTPASSNHNHQTPPNPLGTTSSSTQQQANVP 190

Query: 251 WFYSGSINALRSPPSRD*LPFLPFQHRRVLL 343
           + +    +A  + P  D   FL   H + LL
Sbjct: 191 FAWYNPTHAPPTAPHHDPTTFLTIDHSQSLL 221


>tr|B8BR95|B8BR95_THAPS Predicted protein OS=Thalassiosira pseudonana
            CCMP1335 GN=THAPSDRAFT_20884 PE=4 SV=1
          Length = 1344

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
 Frame = +2

Query: 113  HVTQPHHHFDSESLSEFIGRSVKT-PISEKELEHYAKSPPRP------GANKPWFYSG-- 265
            H     H+FD+++  EF+  +++   +    L   +  PP P       AN+PW   G  
Sbjct: 974  HTNVQRHYFDNDTDDEFLDPTLRAEQLLLLSLHPESPMPPLPTIPASSSANQPWAEPGWH 1033

Query: 266  -SINALRSPPSRD*LPFLPFQHRRVLLR*ANALCC 367
             S++ L  P  R+    LP      L R AN++CC
Sbjct: 1034 VSVDFL--PQVRNEFSILPQDAEGHLARAANSICC 1066


>tr|Q4Q0C6|Q4Q0C6_LEIMA Ubiquitin-protein ligase, putative
           OS=Leishmania major GN=LmjF36.6340 PE=4 SV=1
          Length = 4165

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 225 RLGLEQTNHGFTQAALMH*GVLLAEINYHFCPSNIEECCCVELMH 359
           R GL+  +HG  +  L   G+ LAE+ +HFC +  +  CC+   H
Sbjct: 331 REGLDGESHG--RLTLRTTGLSLAEVRFHFCVTGTDTLCCLVSSH 373


>tr|Q2ULH9|Q2ULH9_ASPOR Kinesin-like protein OS=Aspergillus oryzae
           GN=AO090003000404 PE=3 SV=1
          Length = 745

 Score = 34.3 bits (77), Expect = 4.2
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = +2

Query: 131 HHFDSESLSEFIGRSVKTPISEKELEHYAKSPPRPGANKPWFYSGSINALRSP 289
           +H D+ S   F  R+ K  + E E E   K PPRP A        S+ ALR P
Sbjct: 335 YHLDTLSSLNFANRTKKIEVREVENEPMFKGPPRPAARP------SVTALRQP 381


>tr|B8N221|B8N221_ASPFL Kinesin family protein OS=Aspergillus flavus
           NRRL3357 GN=AFLA_034150 PE=4 SV=1
          Length = 745

 Score = 34.3 bits (77), Expect = 4.2
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = +2

Query: 131 HHFDSESLSEFIGRSVKTPISEKELEHYAKSPPRPGANKPWFYSGSINALRSP 289
           +H D+ S   F  R+ K  + E E E   K PPRP A        S+ ALR P
Sbjct: 335 YHLDTLSSLNFANRTKKIEVREVENEPMFKGPPRPAARP------SVTALRQP 381


>tr|A2QSG5|A2QSG5_ASPNC Remark: Xkid is responsible for the polar
           ejection forces acting on chromosome arms OS=Aspergillus
           niger (strain CBS 513.88 / FGSC A1513) GN=An08g10640
           PE=3 SV=1
          Length = 751

 Score = 33.9 bits (76), Expect = 5.5
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +2

Query: 131 HHFDSESLSEFIGRSVKTPISEKELEHYAKSPPRPGANKPWFYSGSINALRSP 289
           +H D+ S   F  R+ K  + E E E   K PPRP A++P     SI ALR P
Sbjct: 336 YHLDTISSLNFANRTKKIEVREVENEPMFKGPPRP-ASRP-----SIAALRQP 382


>tr|B4MNP0|B4MNP0_DROWI GK19618 OS=Drosophila willistoni GN=GK19618
           PE=4 SV=1
          Length = 440

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = +2

Query: 101 SASVHVTQPHHHFDSESLSE----FIGRSVKTPISEKELEHYAKSPPRP 235
           + SVH T P H  D+ S SE     + R V  P  + ELEH  K  P+P
Sbjct: 19  TCSVHFTNPKHKSDASSSSEEEVGSVTRLVSNP-EDLELEHIFKKSPKP 66