BP918599
Clone id YMU001_000115_D04
Library
Length 398
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATGGTTACTGAAGTACAAAGCATGCTGTTTGTTTGCCTCTTTTTTTAGCTAAATGAAGT
GCAAAGCATGTTGTTGATTCCTCTCTTCAGCCTCCCTCACTTTCCAAGCTTCAAAGCTTA
TCATGCAAAGAAGTGCCTCAATTTGCATCCCTCTGGTAGCATTTGGTTGAACATTGCCTT
GCAAACATGAGTTGATGTGAGCCGTGACTATGGGGCGGATAGGAGCCGCGACAAAATTCA
TCACTTGCAGAAAAGCCCAAGTGACCACAACGCTTCATGAACATGGAGAACCTGTCTTAG
TGATCAGAAGCTGATTTGCAATTGTCTCGAGAACACGTGAAATCCCAAAATAACTCCAAG
GTCCATAAATAGCAGACCATACAGCTTAACTGTTGATT
■■Homology search results ■■ -
sp_hit_id Q8PVW4
Definition sp|Q8PVW4|HDRE_METMA CoB--CoM heterodisulfide reductase 2 subunit E OS=Methanosarcina mazei
Align length 31
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918599|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_D04.
(398 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8PVW4|HDRE_METMA CoB--CoM heterodisulfide reductase 2 subuni... 29 6.4

>sp|Q8PVW4|HDRE_METMA CoB--CoM heterodisulfide reductase 2 subunit E
OS=Methanosarcina mazei GN=hdrE PE=3 SV=1
Length = 259

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3

Query: 213 GRIGAATKFITCRKAQVTTTLHEHGEPVLVI 305
G+ G+A +F+ AQV H HG+P+L +
Sbjct: 54 GKKGSAIRFLKTWWAQVRAESHHHGKPILEV 84


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918599|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_D04.
(398 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******