BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918615|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_E08.
         (448 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68LP1|MIB2_RAT E3 ubiquitin-protein ligase MIB2 OS=Rattus no...    30   4.6  
sp|Q8R516|MIB2_MOUSE E3 ubiquitin-protein ligase MIB2 OS=Mus mus...    30   4.6  

>sp|Q68LP1|MIB2_RAT E3 ubiquitin-protein ligase MIB2 OS=Rattus
           norvegicus GN=Mib2 PE=2 SV=2
          Length = 971

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
 Frame = -3

Query: 200 CCKF-------WQRRVCEQIDTSSLCYVLVMHPLTHA 111
           CCK        W+ RVC   D  + CY+   H LTHA
Sbjct: 93  CCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTHA 129


>sp|Q8R516|MIB2_MOUSE E3 ubiquitin-protein ligase MIB2 OS=Mus
           musculus GN=Mib2 PE=1 SV=2
          Length = 973

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
 Frame = -3

Query: 200 CCKF-------WQRRVCEQIDTSSLCYVLVMHPLTHA 111
           CCK        W+ RVC   D  + CY+   H LTHA
Sbjct: 93  CCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTHA 129

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918615|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_E08.
         (448 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9IR20|A9IR20_BART1 Cytochrome C-type biogenesis protein OS=B...    33   5.5  
tr|Q2KZJ7|Q2KZJ7_BORA1 Putative uncharacterized protein OS=Borde...    33   9.1  

>tr|A9IR20|A9IR20_BART1 Cytochrome C-type biogenesis protein
           OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
           GN=cycK PE=4 SV=1
          Length = 666

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 147 VLCIGYAPIDTCISLLIDGSIIGHIDKVQK*WV 49
           +L +GY     C S  I   IIGHIDK+   WV
Sbjct: 182 LLYLGYVGFSLCFSFAIAALIIGHIDKIWARWV 214


>tr|Q2KZJ7|Q2KZJ7_BORA1 Putative uncharacterized protein
           OS=Bordetella avium (strain 197N) GN=BAV2081 PE=4 SV=1
          Length = 272

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = +3

Query: 210 APFHAIKESTYGHLHLWLAFLQPRR*RLTVQKWAIPIP----RRRPHAAGLFLSMNR 368
           AP  A+    +GH+  W   L+PRR R  V  + + +P    R RP AAG+ L++NR
Sbjct: 9   APQAAVPHIGFGHV--WHTRLRPRRHRFIVPTFFLMLPMRTLRERPEAAGV-LALNR 62