BP918620 |
Clone id |
YMU001_000115_F01 |
Library |
YMU01 |
Length |
556 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000115_F01. |
Accession |
BP918620 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCTCTGGTGGCTTTTAGTTCGATGTTTCTGGTTTTGAACCCTCTGGGCACTAGGCAGCAA AGTGGCCATACTTTCCGCAACCATAACAATTTAGGTTTTGTTTTTCATAATTTCCCCGTC CTCTGTCCCTACCTATGCCCTCCTGATATCTCCCTCAATGAGCACCAGTACTTGTACTAG CCTCATTACCCTTGGACCCACTAGTCCCCACTGCTTTGGATGCTTTTAGATTGGTTAGTG CAATCAGCAATAAGTCCTTACACTTCTTGAAGCGGTGAATCCTTATCCCACAGTTGTTCC AAACACACCATTCATTAGACATATGGTCCTTTGATCTACACTTGGAACACCAAATCTGGC TAAGGGTCTCATCCTCGCAATTTCAGCTATTTGTTTGGACATTTCCTCTTTTGGTCCAAG ATCCTTTCTTCTTCCCCTTACCCTTATCCTCTGATTCACTTTCACATGAATTGGAGATAG AATTGGAACTAGAACGTTCTTCAGTGGAGGACTCACTCTCACTATCCATTGTTTCTTCTT GTGCCCCTTCTCCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q04832 |
Definition |
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major |
Align length |
115 |
Score (bit) |
41.2 |
E-value |
0.003 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918620|Adiantum capillus-veneris mRNA, clone: YMU001_000115_F01. (556 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj... 41 0.003 sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol... 41 0.005 sp|Q38896|GRP2B_ARATH Glycine-rich protein 2b OS=Arabidopsis tha... 37 0.085 sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1 OS=Caenorh... 37 0.085 sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 OS=Caenorh... 36 0.11 sp|P23425|GAG_VILV2 Gag polyprotein OS=Maedi visna virus (strain... 34 0.42 sp|P23424|GAG_VILV1 Gag polyprotein OS=Maedi visna virus (strain... 34 0.42 sp|P03352|GAG_VILV Gag polyprotein OS=Maedi visna virus (strain ... 34 0.42 sp|P40507|AIR1_YEAST Protein AIR1 OS=Saccharomyces cerevisiae GN... 34 0.42 sp|P05892|GAG_SIVVT Gag polyprotein OS=Simian immunodeficiency v... 34 0.55 sp|P05895|POL_SIVVT Gag-Pol polyprotein OS=Simian immunodeficien... 33 0.72 sp|P27980|POL_SIVVG Gag-Pol polyprotein OS=Simian immunodeficien... 33 0.72 sp|P27973|POL_SIVV1 Gag-Pol polyprotein OS=Simian immunodeficien... 33 0.72 sp|P27978|GAG_SIVVG Gag polyprotein OS=Simian immunodeficiency v... 33 0.72 sp|P27972|GAG_SIVV1 Gag polyprotein OS=Simian immunodeficiency v... 33 0.72 sp|P35955|GAG_VILVK Gag polyprotein OS=Maedi visna virus (strain... 33 0.94 sp|Q69ZB8|ZCHC2_MOUSE Zinc finger CCHC domain-containing protein... 32 1.6 sp|Q9C0B9|ZCHC2_HUMAN Zinc finger CCHC domain-containing protein... 32 1.6 sp|Q8WYQ9|ZCH14_HUMAN Zinc finger CCHC domain-containing protein... 32 1.6 sp|Q5KMN5|YTH1_CRYNE mRNA 3'-end-processing protein YTH1 OS=Cryp... 32 1.6 sp|P27484|GRP2_NICSY Glycine-rich protein 2 OS=Nicotiana sylvest... 32 1.6 sp|Q8VIG0|ZCH14_MOUSE Zinc finger CCHC domain-containing protein... 32 2.1 sp|P20875|POL_HV1JR Gag-Pol polyprotein OS=Human immunodeficienc... 32 2.1 sp|Q9VRN5|LIN28_DROME Lin-28 homolog OS=Drosophila melanogaster ... 32 2.1 sp|Q93YN9|IPPK_ARATH Inositol-pentakisphosphate 2-kinase OS=Arab... 32 2.1 sp|P20873|GAG_HV1JR Gag polyprotein OS=Human immunodeficiency vi... 32 2.1 sp|P33458|GAG_CAEVC Gag polyprotein OS=Caprine arthritis encepha... 32 2.7 sp|Q66KE3|CPSF4_XENTR Cleavage and polyadenylation specificity f... 32 2.7 sp|P17283|POL_SIVCZ Gag-Pol polyprotein OS=Simian immunodeficien... 31 3.6 sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 31 3.6
>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=4 SV=1 Length = 271
Score = 41.2 bits (95), Expect = 0.003 Identities = 29/115 (25%), Positives = 38/115 (33%), Gaps = 11/115 (9%) Frame = -1
Query: 349 CSKCRSKDHMSNEW-----------CVWNNCGIRIHRFKKCKDLLLIALTNLKASKAVGT 203 C +C + HMS E CG H + C + G Sbjct: 45 CFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQ 104
Query: 202 SGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEG 38 G + +S G G Y + GR +G Y CY CG GH + CP G Sbjct: 105 EGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDR-TCYKCGDAGHISRDCPNG 158
Score = 31.2 bits (69), Expect = 3.6 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Frame = -1
Query: 295 NCGIRIHRFKKCKDLLLIALTNLKASKAVGTSGSKGNEASTST-----GAH*GRYQEGIG 131 NCG H ++C + + SKG+E ST+ H R Sbjct: 20 NCGKEGHYARECPE-----------------ADSKGDERSTTCFRCGEEGHMSRECPNEA 62
Query: 130 RDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSKP 29 R G + C+ CG+ GH + CP +KP Sbjct: 63 RSGAAGA-----MTCFRCGEAGHMSRDCPNSAKP 91
>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe GN=byr3 PE=2 SV=1 Length = 179
Score = 40.8 bits (94), Expect = 0.005 Identities = 35/123 (28%), Positives = 46/123 (37%), Gaps = 17/123 (13%) Frame = -1
Query: 349 CSKCRSKDHMSNEWC---VWNNCGIRIHRFKKCKDLLLIALTNLKASKAVGTSGSKGNEA 179 C C H + E + NC H+ +C + K A GT+G + Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEP-----QQEKTCYACGTAGHLVRDC 73
Query: 178 STSTGAH*GR--YQEG----IGRD--------RGRGNYEKQNLNCYGCGKYGHFAA*CPE 41 +S G Y+ G I RD GR + N+NCY CG YGH A C Sbjct: 74 PSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTM 133
Query: 40 GSK 32 G K Sbjct: 134 GVK 136
>sp|Q38896|GRP2B_ARATH Glycine-rich protein 2b OS=Arabidopsis thaliana GN=GRP2B PE=2 SV=1 Length = 201
Score = 36.6 bits (83), Expect = 0.085 Identities = 20/45 (44%), Positives = 22/45 (48%) Frame = -1
Query: 172 STGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEG 38 S G GRY G G G G L+CY CG+ GHFA C G Sbjct: 159 SGGGGGGRYGSGGGGGGGGGG-----LSCYSCGESGHFARDCTSG 198
>sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1 OS=Caenorhabditis elegans GN=glh-1 PE=1 SV=3 Length = 763
Score = 36.6 bits (83), Expect = 0.085 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -1
Query: 220 SKAVGTSGSKGNEAST--STGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*C 47 S A G SG G A+ S G G G G + G G E+ N NC+ C + GH ++ C Sbjct: 116 SSAFGGSGGFGGSATGFGSGGGSFGGGNSGFG-EGGHGGGERNN-NCFNCQQPGHRSSDC 173
Query: 46 PEGSK 32 PE K Sbjct: 174 PEPRK 178
Score = 32.3 bits (72), Expect = 1.6 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 11/114 (9%) Frame = -1
Query: 349 CSKCRSKDHMSNEWC----------VWNNCGIRIHRFKKCKDLLLIALTNLKASKAVGTS 200 C C+ H S++ C V NC H ++C T + + T Sbjct: 160 CFNCQQPGHRSSD-CPEPRKEREPRVCYNCQQPGHTSREC--------TEERKPREGRTG 210
Query: 199 GSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQN-LNCYGCGKYGHFAA*CPE 41 G G + G + +G G D G G E++ + C+ C GH +A CPE Sbjct: 211 GFGGGAGFGNNGGN-----DGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
>sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 OS=Caenorhabditis elegans GN=glh-2 PE=1 SV=1 Length = 974
Score = 36.2 bits (82), Expect = 0.11 Identities = 20/59 (33%), Positives = 27/59 (45%) Frame = -1
Query: 208 GTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSK 32 G SG G S +G G G G G + ++N NC+ C + GH + CPE K Sbjct: 219 GKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 33.1 bits (74), Expect = 0.94 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1
Query: 208 GTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSK 32 G +G G + G G G G+DRG ++N NC+ C + GH + CPE K Sbjct: 338 GNNGESGFGSGGFGGNSNGFGSGGGGQDRG-----ERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 32.0 bits (71), Expect = 2.1 Identities = 30/132 (22%), Positives = 43/132 (32%), Gaps = 25/132 (18%) Frame = -1
Query: 349 CSKCRSKDHMSNEWC----------VWNNCGIRIHRFKKCKDLLLIALTNLKASKAVGTS 200 C C+ H SN+ C V NC H + C + + G + Sbjct: 373 CFNCQQPGHRSND-CPEPKKEREPRVCYNCQQPGHNSRDCPE---------ERKPREGRN 422
Query: 199 GSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLN---------------CYGCGKYG 65 G + G G EG G + RG + N C+ CG+ G Sbjct: 423 GFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 482
Query: 64 HFAA*CPEGSKP 29 H + CP +KP Sbjct: 483 HRSNECPNPAKP 494
>sp|P23425|GAG_VILV2 Gag polyprotein OS=Maedi visna virus (strain 1514 / clone LV1-1KS2) GN=gag PE=3 SV=1 Length = 442
Score = 34.3 bits (77), Expect = 0.42 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1
Query: 130 RDRGRGNYEKQNLNCYGCGKYGHFAA*CPEG 38 R +G+ ++ N CY CGK GH A C +G Sbjct: 373 RPQGKAGHKGVNQKCYNCGKPGHLARQCRQG 403
>sp|P23424|GAG_VILV1 Gag polyprotein OS=Maedi visna virus (strain 1514 / clone LV1-1KS1) GN=gag PE=3 SV=1 Length = 442
Score = 34.3 bits (77), Expect = 0.42 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1
Query: 130 RDRGRGNYEKQNLNCYGCGKYGHFAA*CPEG 38 R +G+ ++ N CY CGK GH A C +G Sbjct: 373 RPQGKAGHKGVNQKCYNCGKPGHLARQCRQG 403
>sp|P03352|GAG_VILV Gag polyprotein OS=Maedi visna virus (strain 1514) GN=gag PE=3 SV=1 Length = 442
Score = 34.3 bits (77), Expect = 0.42 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1
Query: 130 RDRGRGNYEKQNLNCYGCGKYGHFAA*CPEG 38 R +G+ ++ N CY CGK GH A C +G Sbjct: 373 RPQGKAGHKGVNQKCYNCGKPGHLARQCRQG 403
>sp|P40507|AIR1_YEAST Protein AIR1 OS=Saccharomyces cerevisiae GN=AIR1 PE=1 SV=1 Length = 360
Score = 34.3 bits (77), Expect = 0.42 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -1
Query: 130 RDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSKPETSN 17 +D +G+++ Q + CY CG GHF C E N Sbjct: 161 KDANQGDFDFQTVFCYNCGNAGHFGDDCAERRSSRVPN 198
>sp|P05892|GAG_SIVVT Gag polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1) GN=gag PE=3 SV=1 Length = 519
Score = 33.9 bits (76), Expect = 0.55 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1
Query: 124 RGRGNYEKQNLNCYGCGKYGHFAA*CPEGSK 32 +G ++ L CY CGK+GH CPE K Sbjct: 387 QGGPKRQRPPLRCYNCGKFGHMQRQCPEPRK 417
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7F814 |
Definition |
tr|Q7F814|Q7F814_ORYSJ Similar to Arabidopsis thaliana lectin receptor kinase OS=Oryza sativa subsp. japonica |
Align length |
51 |
Score (bit) |
45.4 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918620|Adiantum capillus-veneris mRNA, clone: YMU001_000115_F01. (556 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7F814|Q7F814_ORYSJ Similar to Arabidopsis thaliana lectin re... 45 0.002 tr|A2ZPI9|A2ZPI9_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A5B313|A5B313_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|Q9SKV6|Q9SKV6_ARATH F5J5.14 OS=Arabidopsis thaliana PE=4 SV=1 43 0.013 tr|Q9LPK1|Q9LPK1_ARATH F6N18.1 OS=Arabidopsis thaliana PE=4 SV=2 43 0.013 tr|Q9FH39|Q9FH39_ARATH Copia-type polyprotein (Polyprotein) OS=A... 43 0.013 tr|Q9C7Y1|Q9C7Y1_ARATH Copia-type polyprotein, putative; 28768-3... 43 0.013 tr|A5C9X9|A5C9X9_VITVI Putative uncharacterized protein OS=Vitis... 42 0.017 tr|Q94I37|Q94I37_ORYSJ Putative retroelement OS=Oryza sativa sub... 42 0.022 tr|Q338J6|Q338J6_ORYSJ Retrotransposon protein, putative, unclas... 42 0.022 tr|Q4Q1R0|Q4Q1R0_LEIMA Universal minicircle sequence binding pro... 41 0.038 tr|B8MIH3|B8MIH3_9EURO Zinc knuckle domain protein (Byr3), putat... 41 0.038 tr|Q9SXB2|Q9SXB2_ARATH T28P6.8 protein OS=Arabidopsis thaliana G... 41 0.050 tr|Q9M2D1|Q9M2D1_ARATH Copia-type polyprotein OS=Arabidopsis tha... 41 0.050 tr|Q9M197|Q9M197_ARATH Copia-type reverse transcriptase-like pro... 41 0.050 tr|Q9C739|Q9C739_ARATH Copia-type polyprotein, putative OS=Arabi... 41 0.050 tr|Q9C536|Q9C536_ARATH Copia-type polyprotein, putative OS=Arabi... 41 0.050 tr|Q8LSK0|Q8LSK0_MAIZE Gag and Pol OS=Zea mays GN=gag/pol PE=4 SV=1 41 0.050 tr|Q84SW8|Q84SW8_ORYSJ Gag-pol polyprotein (Retrotransposon prot... 40 0.065 tr|Q7XMW2|Q7XMW2_ORYSJ OSJNBb0040D15.12 protein OS=Oryza sativa ... 40 0.065 tr|A6YTD9|A6YTD9_CUCME Integrase OS=Cucumis melo PE=4 SV=1 40 0.085 tr|A5B506|A5B506_VITVI Putative uncharacterized protein OS=Vitis... 40 0.085 tr|B6QHZ9|B6QHZ9_PENMA Zinc knuckle domain protein (Byr3), putat... 40 0.085 tr|B2WLL7|B2WLL7_PYRTR Putative uncharacterized protein OS=Pyren... 40 0.085 tr|A5C546|A5C546_VITVI Putative uncharacterized protein OS=Vitis... 40 0.11 tr|B6JZK3|B6JZK3_SCHJP Cellular nucleic acid-binding protein OS=... 40 0.11 tr|Q1XE76|Q1XE76_SIVCZ Gag polyprotein OS=Simian immunodeficienc... 39 0.14 tr|A5BHG0|A5BHG0_VITVI Putative uncharacterized protein OS=Vitis... 39 0.14 tr|Q6BCY1|Q6BCY1_IPOBA Gag-Pol OS=Ipomoea batatas GN=Rtsp-1AA PE... 39 0.19 tr|Q10RM4|Q10RM4_ORYSJ Retrotransposon protein, putative, unclas... 39 0.19
>tr|Q7F814|Q7F814_ORYSJ Similar to Arabidopsis thaliana lectin receptor kinase OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 305
Score = 45.4 bits (106), Expect = 0.002 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = -1
Query: 184 EASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSK 32 EA + + G G+G + RG ++K + C+ CGK+GHFA C E K Sbjct: 235 EAKVAEESSGGSGSNGVGEKKFRGKFDKSKIECHRCGKFGHFADECDEPRK 285
>tr|A2ZPI9|A2ZPI9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000461 PE=4 SV=1 Length = 759
Score = 45.4 bits (106), Expect = 0.002 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = -1
Query: 184 EASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSK 32 EA + + G G+G + RG ++K + C+ CGK+GHFA C E K Sbjct: 689 EAKVAEESSGGSGSNGVGEKKFRGKFDKSKIECHRCGKFGHFADECDEPRK 739
>tr|A5B313|A5B313_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017862 PE=4 SV=1 Length = 639
Score = 44.3 bits (103), Expect = 0.004 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 11/110 (10%) Frame = -1
Query: 328 DHMSNEWCVWNNCGIRIHRFKKCKDLLLIALTNLKASKAVGTSG---SKGNEASTST--- 167 D+ S V N +R+H + KD+ L+++ L++S V KG E + Sbjct: 223 DYFSRVMFVANK--MRVH---ESKDIDLLSIDELQSSLIVHEQKFHRHKGEEQALKVIHE 277
Query: 166 ----GAH*GR-YQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGSK 32 G GR G G+DRGR ++ K + CY C K GHF CP K Sbjct: 278 ESVGGRGRGRGSSRGRGKDRGRQSFNKDTVKCYKCHKLGHFQYECPSWDK 327
>tr|Q9SKV6|Q9SKV6_ARATH F5J5.14 OS=Arabidopsis thaliana PE=4 SV=1 Length = 743
Score = 42.7 bits (99), Expect = 0.013 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = -1
Query: 139 GIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CPEGS 35 G GR RGRG+ + + CY C K GH+A+ CP+ + Sbjct: 231 GRGRGRGRGSRDTSKVTCYRCDKLGHYASNCPDSN 265
>tr|Q9LPK1|Q9LPK1_ARATH F6N18.1 OS=Arabidopsis thaliana PE=4 SV=2 Length = 1207
Score = 42.7 bits (99), Expect = 0.013 Identities = 24/66 (36%), Positives = 29/66 (43%) Frame = -1
Query: 229 LKASKAVGTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA* 50 LKA G +G S S G G YQ RGRG + + C+ C K GH+ A Sbjct: 114 LKAETQWRPDGGRGRGGSPSRGRGRGGYQ-----GRGRGYVNRDTVECFKCHKMGHYKAE 168
Query: 49 CPEGSK 32 CP K Sbjct: 169 CPSWEK 174
>tr|Q9FH39|Q9FH39_ARATH Copia-type polyprotein (Polyprotein) OS=Arabidopsis thaliana PE=4 SV=1 Length = 1334
Score = 42.7 bits (99), Expect = 0.013 Identities = 24/66 (36%), Positives = 29/66 (43%) Frame = -1
Query: 229 LKASKAVGTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA* 50 LKA G +G S S G G YQ RGRG + + C+ C K GH+ A Sbjct: 209 LKAETQWRPDGGRGRGGSPSRGRGRGGYQ-----GRGRGYVNRDTVECFKCHKMGHYKAE 263
Query: 49 CPEGSK 32 CP K Sbjct: 264 CPSWEK 269
>tr|Q9C7Y1|Q9C7Y1_ARATH Copia-type polyprotein, putative; 28768-32772 OS=Arabidopsis thaliana GN=T9G5.7 PE=4 SV=1 Length = 1334
Score = 42.7 bits (99), Expect = 0.013 Identities = 24/66 (36%), Positives = 29/66 (43%) Frame = -1
Query: 229 LKASKAVGTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA* 50 LKA G +G S S G G YQ RGRG + + C+ C K GH+ A Sbjct: 209 LKAETQWRPDGGRGRGGSPSRGRGRGGYQ-----GRGRGYVNRDTVECFKCHKMGHYKAE 263
Query: 49 CPEGSK 32 CP K Sbjct: 264 CPSWEK 269
>tr|A5C9X9|A5C9X9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027568 PE=4 SV=1 Length = 1226
Score = 42.4 bits (98), Expect = 0.017 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = -1
Query: 178 STSTGAH*GRYQEGIGRDRGRGNYEKQNLNCYGCGKYGHFAA*CP 44 S S G G Y+ G GR R R +++K + CY C K GHFA CP Sbjct: 163 SGSRGRGHGNYR-GRGRGRNRRSFDKATVECYNCHKLGHFAWECP 206
>tr|Q94I37|Q94I37_ORYSJ Putative retroelement OS=Oryza sativa subsp. japonica GN=OSJNBa0050N08.13 PE=4 SV=1 Length = 1217
Score = 42.0 bits (97), Expect = 0.022 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 12/74 (16%) Frame = -1
Query: 217 KAVGTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYE------------KQNLNCYGCG 74 K G + S + GA+ G+ + G GR RGRG + K ++ C+ C Sbjct: 218 KGGGETSSPQKNKPSGEGANHGQAERGRGRGRGRGGTQRSGGGSSGGGRDKSHIKCFNCE 277
Query: 73 KYGHFAA*CPEGSK 32 ++GH++ CP K Sbjct: 278 EFGHYSTQCPHPKK 291
>tr|Q338J6|Q338J6_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os10g26030 PE=4 SV=2 Length = 1172
Score = 42.0 bits (97), Expect = 0.022 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 12/74 (16%) Frame = -1
Query: 217 KAVGTSGSKGNEASTSTGAH*GRYQEGIGRDRGRGNYE------------KQNLNCYGCG 74 K G + S + GA+ G+ + G GR RGRG + K ++ C+ C Sbjct: 74 KGGGETSSPQKNKPSGEGANHGQAERGRGRGRGRGGTQRSGGGSSGGGRDKSHIKCFNCE 133
Query: 73 KYGHFAA*CPEGSK 32 ++GH++ CP K Sbjct: 134 EFGHYSTQCPHPKK 147
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