BP918630 |
Clone id |
YMU001_000115_F12 |
Library |
YMU01 |
Length |
429 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000115_F12. |
Accession |
BP918630 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL619Contig1 |
Sequence |
GACAGGCCCAATTCCAGAGATTTCACACACATGAGCTCCAACAACTTTATGAACAACATG GATTTATGTGGTGCTTCTCTACCAAATGCATGTCCAATACAACAAGTGACAGAGAGCAGT GGAACGGATGGCACCCATAGTGTTGCCATAGTGCAAACAATTGTTGGTACTGTAGTGGGA GTGCTTGGTCTCTCGTTTGTAGTAATAGTCTTGGCAGCATTTTGTATGTGTCGCAAGCGG CCATCGCGCGGAGGATTCCATGGATTGAATGAGCTTGAGAAGGAGCGAAGCGACTCGGAG AGCAGCTACACATTCTTCACGGCAGCGGCGCCAGAGTTTACTTTTCAGGATATACTGGAA GCAACAGGAAATTTTTCGCAGGAGTGTGAGATCGGGAGGGGAGCAAGTGGAACGGTGTAC AAAGCGAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LU47 |
Definition |
sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana |
Align length |
49 |
Score (bit) |
34.3 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QXA6 |
Definition |
tr|A7QXA6|A7QXA6_VITVI Chromosome undetermined scaffold_217, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
27 |
Score (bit) |
45.8 |
E-value |
0.001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918630|Adiantum capillus-veneris mRNA, clone: YMU001_000115_F12. (429 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QXA6|A7QXA6_VITVI Chromosome undetermined scaffold_217, who... 46 0.001 tr|A5C7Y8|A5C7Y8_VITVI Putative uncharacterized protein OS=Vitis... 46 0.001 tr|A9T7K5|A9T7K5_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|A9TE22|A9TE22_PHYPA CLL6 clavata1-like receptor S/T protein k... 43 0.007 tr|Q6YT77|Q6YT77_ORYSJ cDNA, clone: J090052O12, full insert sequ... 41 0.026 tr|Q0D8K3|Q0D8K3_ORYSJ Os07g0152200 protein OS=Oryza sativa subs... 41 0.026 tr|A3BGN1|A3BGN1_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.026 tr|A2YI88|A2YI88_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.026 tr|Q6K7X5|Q6K7X5_ORYSJ Os02g0615300 protein OS=Oryza sativa subs... 41 0.034 tr|Q7X817|Q7X817_ORYSA OSJNBb0002J11.4 protein (OSIGBa0145C12.4 ... 40 0.058 tr|Q7F8X5|Q7F8X5_ORYSJ OSJNBb0116K07.19 protein (Putative unchar... 40 0.058 tr|Q9SHI2|Q9SHI2_ARATH Similar to leucine-rich receptor-like pro... 39 0.13 tr|Q8GX06|Q8GX06_ARATH Putative leucine-rich receptor protein ki... 39 0.13 tr|A7NXS2|A7NXS2_VITVI Chromosome chr5 scaffold_2, whole genome ... 39 0.13 tr|A5AEJ7|A5AEJ7_VITVI Putative uncharacterized protein OS=Vitis... 39 0.13 tr|B8AFE6|B8AFE6_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.17 tr|Q9LVP0|Q9LVP0_ARATH Receptor-like protein kinase OS=Arabidops... 38 0.22 tr|Q5NAV8|Q5NAV8_ORYSJ Putative uncharacterized protein P0462H08... 37 0.38 tr|B8AC91|B8AC91_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.38 tr|B7EDA1|B7EDA1_ORYSJ cDNA clone:J013100E20, full insert sequen... 37 0.38 tr|A2ZRF9|A2ZRF9_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.38 tr|Q9SN91|Q9SN91_ARATH Leucine rich repeat-like protein OS=Arabi... 37 0.49 tr|Q9CA77|Q9CA77_ARATH Putative receptor protein kinase; 10992-1... 37 0.49 tr|Q6L3I5|Q6L3I5_SOLDE Leucine Rich Repeat family protein OS=Sol... 37 0.49 tr|Q5JKA2|Q5JKA2_ORYSJ KI domain interacting kinase 1-like prote... 37 0.49 tr|B8AA27|B8AA27_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.49 tr|A9TPI7|A9TPI7_PHYPA Predicted protein OS=Physcomitrella paten... 36 0.84 tr|Q7F8Q8|Q7F8Q8_ORYSJ Putative leucine-rich repeat transmembran... 36 1.1 tr|Q0IZT7|Q0IZT7_ORYSJ Os09g0551000 protein OS=Oryza sativa subs... 36 1.1 tr|Q0E345|Q0E345_ORYSJ Os02g0194600 protein OS=Oryza sativa subs... 36 1.1
>tr|A7QXA6|A7QXA6_VITVI Chromosome undetermined scaffold_217, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009046001 PE=4 SV=1 Length = 1109
Score = 45.8 bits (107), Expect = 0.001 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +1
Query: 346 QDILEATGNFSQECEIGRGASGTVYKA 426 QD+LEATGNFS+ IGRGA GTVYKA Sbjct: 797 QDLLEATGNFSESAIIGRGACGTVYKA 823
>tr|A5C7Y8|A5C7Y8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009202 PE=4 SV=1 Length = 1271
Score = 45.8 bits (107), Expect = 0.001 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +1
Query: 346 QDILEATGNFSQECEIGRGASGTVYKA 426 QD+LEATGNFS+ IGRGA GTVYKA Sbjct: 797 QDLLEATGNFSESAIIGRGACGTVYKA 823
>tr|A9T7K5|A9T7K5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192394 PE=4 SV=1 Length = 1144
Score = 45.1 bits (105), Expect = 0.002 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 1/142 (0%) Frame = +1
Query: 7 PNSRDFTHMSSNNFMNNMDLCGASLPNACPIQQVTESSGTDGTHSXXXXXXXXXXXXXXX 186 P++ F ++ ++F NN +CG +P ACP V T Sbjct: 691 PSTGLFARLNESSFYNN-SVCGGPVPVACPPAVVMPVPMTPVWKDSSVSAAAVVGIIAGV 749
Query: 187 XXXXXXXXXAAFC-MCRKRPSRGGFHGLNELEKERSDSESSYXXXXXXXXXXXXQDILEA 363 C CR+ PS ++ E+ E+ + QDI+ A Sbjct: 750 VGGALLMILIGACWFCRRPPSA------RQVASEKDIDETIFLPRAGVTL----QDIVTA 799
Query: 364 TGNFSQECEIGRGASGTVYKAK 429 T NFS E IG+GA GTVYKA+ Sbjct: 800 TENFSDEKVIGKGACGTVYKAQ 821
>tr|A9TE22|A9TE22_PHYPA CLL6 clavata1-like receptor S/T protein kinase protein OS=Physcomitrella patens subsp. patens GN=CLL6 PE=4 SV=1 Length = 1144
Score = 43.1 bits (100), Expect = 0.007 Identities = 38/141 (26%), Positives = 54/141 (38%), Gaps = 1/141 (0%) Frame = +1
Query: 7 PNSRDFTHMSSNNFMNNMDLCGASLPNACPIQQVTESSGTDGTHSXXXXXXXXXXXXXXX 186 P++ F ++ ++F N +CG LP ACP V + Sbjct: 691 PSTGLFAKLNESSFYNT-SVCGGPLPIACPPTVVLPTPMAPIWQDSSVSAGAVVGIIAVV 749
Query: 187 XXXXXXXXXAAFC-MCRKRPSRGGFHGLNELEKERSDSESSYXXXXXXXXXXXXQDILEA 363 C CR+ P G ++ E+ E+ + QDI+ A Sbjct: 750 IVGALLIILIGACWFCRRPP------GATQVASEKDMDETIFLPRTGVSL----QDIIAA 799
Query: 364 TGNFSQECEIGRGASGTVYKA 426 T NFS IG+GASGTVYKA Sbjct: 800 TENFSNTKVIGKGASGTVYKA 820
>tr|Q6YT77|Q6YT77_ORYSJ cDNA, clone: J090052O12, full insert sequence OS=Oryza sativa subsp. japonica GN=B1364A02.24 PE=2 SV=1 Length = 1109
Score = 41.2 bits (95), Expect = 0.026 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 9/149 (6%) Frame = +1
Query: 7 PNSRDFTHMSSNNFMNNMDLCGASLPNACPIQQVTESSGTDGTHSXXXXXXXXXXXXXXX 186 P++ F HM S+NF+ N LCG + + +S Sbjct: 693 PSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIV 752
Query: 187 XXXXXXXXXAAFCMCRK---------RPSRGGFHGLNELEKERSDSESSYXXXXXXXXXX 339 A C K + GF G + KER Sbjct: 753 IAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKER----------------I 796
Query: 340 XXQDILEATGNFSQECEIGRGASGTVYKA 426 Q++++ T +FS+ IGRGA GTVYKA Sbjct: 797 TFQELMKVTDSFSESAVIGRGACGTVYKA 825
>tr|Q0D8K3|Q0D8K3_ORYSJ Os07g0152200 protein OS=Oryza sativa subsp. japonica GN=Os07g0152200 PE=4 SV=1 Length = 1233
Score = 41.2 bits (95), Expect = 0.026 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 9/149 (6%) Frame = +1
Query: 7 PNSRDFTHMSSNNFMNNMDLCGASLPNACPIQQVTESSGTDGTHSXXXXXXXXXXXXXXX 186 P++ F HM S+NF+ N LCG + + +S Sbjct: 817 PSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIV 876
Query: 187 XXXXXXXXXAAFCMCRK---------RPSRGGFHGLNELEKERSDSESSYXXXXXXXXXX 339 A C K + GF G + KER Sbjct: 877 IAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKER----------------I 920
Query: 340 XXQDILEATGNFSQECEIGRGASGTVYKA 426 Q++++ T +FS+ IGRGA GTVYKA Sbjct: 921 TFQELMKVTDSFSESAVIGRGACGTVYKA 949
>tr|A3BGN1|A3BGN1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022203 PE=4 SV=1 Length = 951
Score = 41.2 bits (95), Expect = 0.026 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 9/149 (6%) Frame = +1
Query: 7 PNSRDFTHMSSNNFMNNMDLCGASLPNACPIQQVTESSGTDGTHSXXXXXXXXXXXXXXX 186 P++ F HM S+NF+ N LCG + + +S Sbjct: 663 PSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIV 722
Query: 187 XXXXXXXXXAAFCMCRK---------RPSRGGFHGLNELEKERSDSESSYXXXXXXXXXX 339 A C K + GF G + KER Sbjct: 723 IAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKER----------------I 766
Query: 340 XXQDILEATGNFSQECEIGRGASGTVYKA 426 Q++++ T +FS+ IGRGA GTVYKA Sbjct: 767 TFQELMKVTDSFSESAVIGRGACGTVYKA 795
>tr|A2YI88|A2YI88_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24925 PE=4 SV=1 Length = 1109
Score = 41.2 bits (95), Expect = 0.026 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 9/149 (6%) Frame = +1
Query: 7 PNSRDFTHMSSNNFMNNMDLCGASLPNACPIQQVTESSGTDGTHSXXXXXXXXXXXXXXX 186 P++ F HM S+NF+ N LCG + + +S Sbjct: 693 PSTTLFQHMDSSNFLGNNGLCGIKGKSCSGLSGSAYASREAAVQKKRLLREKIISISSIV 752
Query: 187 XXXXXXXXXAAFCMCRK---------RPSRGGFHGLNELEKERSDSESSYXXXXXXXXXX 339 A C K + GF G + KER Sbjct: 753 IAFVSLVLIAVVCWSLKSKIPDLVSNEERKTGFSGPHYFLKER----------------I 796
Query: 340 XXQDILEATGNFSQECEIGRGASGTVYKA 426 Q++++ T +FS+ IGRGA GTVYKA Sbjct: 797 TFQELMKVTDSFSESAVIGRGACGTVYKA 825
>tr|Q6K7X5|Q6K7X5_ORYSJ Os02g0615300 protein OS=Oryza sativa subsp. japonica GN=P0407A09.23 PE=4 SV=1 Length = 997
Score = 40.8 bits (94), Expect = 0.034 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = +1
Query: 346 QDILEATGNFSQECEIGRGASGTVYKAK 429 +DI +ATGNFSQ IGRG+ G+VYKAK Sbjct: 661 KDIAQATGNFSQSNLIGRGSYGSVYKAK 688
>tr|Q7X817|Q7X817_ORYSA OSJNBb0002J11.4 protein (OSIGBa0145C12.4 protein) OS=Oryza sativa GN=OSJNBb0002J11.4 PE=4 SV=1 Length = 1104
Score = 40.0 bits (92), Expect = 0.058 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +1
Query: 346 QDILEATGNFSQECEIGRGASGTVYKA 426 Q+++ AT NF + C IGRGA GTVY+A Sbjct: 797 QELVSATNNFDESCVIGRGACGTVYRA 823
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