BP918635
Clone id YMU001_000115_G05
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAACTTCATATCTTCATCATTTCTTGAAAAATGAGAGATGTATGGGTAAATTGGCTTTCA
ACAAGGGAAGGTTGTGCATAAGGGCATGACCAGATGTGTAATCGACCACAAGGCACGAAC
AATGAGAGCAATCATCATAGGTATGTGACCTAAACATATTCAGCAAGCAGCTATAAATAA
TGCCACCAATTATATTACCATTACTTTCCAAACAGCTTTGCAGTGACTGTTATAGTAGCT
CTAAAATGGAAGATGGAACTCGATCTTCCATGAAATGCCGAGCATGGCTGACTCTTTGCA
AGAATCATGGCAACATATGGTATTGTTTAAGTTTGGTTGCTCCTGCCCAATACTACTGGT
TTGTAAGCACTTGTTTTAAAAAACAAGTATGTGGCTTCCCAAGCGCTCGCTATGTGGTTT
ACCCTTCTAAATGTAGTCAGCAGATAAAAGAACCTCAAAAGATGTATAGGTTAATCGCAG
CAGTCGCTATGGTGGTAATCAGCACAGAATAAAAGTTAACTCCATTATT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918635|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_G05.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A9NSQ5
Definition tr|A9NSQ5|A9NSQ5_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 24
Score (bit) 37.0
E-value 0.62
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918635|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_G05.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NSQ5|A9NSQ5_PICSI Putative uncharacterized protein OS=Picea... 37 0.62
tr|B7TWN4|B7TWN4_9ACTO Putative ATP-dependent helicase OS=Strept... 34 4.0
tr|A8X595|A8X595_CAEBR Putative uncharacterized protein OS=Caeno... 34 5.2
tr|Q8LF53|Q8LF53_ARATH Putative uncharacterized protein OS=Arabi... 33 9.0
tr|Q0WP96|Q0WP96_ARATH Putative uncharacterized protein At5g1993... 33 9.0

>tr|A9NSQ5|A9NSQ5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 287

Score = 37.0 bits (84), Expect = 0.62
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -1

Query: 529 NNGVNFYSVLITTIATAAINLYIF 458
NNGVNF SVL+TT+ T+ + LY+F
Sbjct: 264 NNGVNFVSVLLTTLGTSVVCLYLF 287


>tr|B7TWN4|B7TWN4_9ACTO Putative ATP-dependent helicase
OS=Streptomyces pactum PE=4 SV=1
Length = 1043

Score = 34.3 bits (77), Expect = 4.0
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -2

Query: 408 ERLGSHILVF*NKCLQTSSIGQEQPNLNNTICCHDSCKESAMLGISWKIEFHLP 247
++LGSH+L+F + + S IG QP + +D+ S +GI WK+ + LP
Sbjct: 979 KKLGSHVLLFVRR-YKKSDIGGAQPWMLLGPAEYDTHSGSKPMGIVWKLRYELP 1031


>tr|A8X595|A8X595_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG07847 PE=4 SV=1
Length = 557

Score = 33.9 bits (76), Expect = 5.2
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3

Query: 210 KQLCSDCYSSSKMEDGTRSSMKCRAWLTLCKNHGNIWYCLSL-VAPAQYYWFVSTCFKKQ 386
+Q C C+ + +D + KC W W+C+ + V P +W+ S C K Q
Sbjct: 484 EQNCPICHVEYEKDDNMVACDKCEGWFH--------WHCVGITVEPKAAHWYCSACVKSQ 535


>tr|Q8LF53|Q8LF53_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 288

Score = 33.1 bits (74), Expect = 9.0
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -1

Query: 529 NNGVNFYSVLITTIATAAINLYIF 458
NNGVNF S+L+T+ T+ ++YIF
Sbjct: 265 NNGVNFVSILLTSFLTSIASVYIF 288


>tr|Q0WP96|Q0WP96_ARATH Putative uncharacterized protein At5g19930
OS=Arabidopsis thaliana GN=At5g19930 PE=2 SV=1
Length = 288

Score = 33.1 bits (74), Expect = 9.0
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -1

Query: 529 NNGVNFYSVLITTIATAAINLYIF 458
NNGVNF S+L+T+ T+ ++YIF
Sbjct: 265 NNGVNFVSILLTSFLTSIASVYIF 288