BP918636 |
Clone id |
YMU001_000115_G06 |
Library |
YMU01 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000115_G06. |
Accession |
BP918636 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1948Contig1 |
Sequence |
ATCTTTGAAGAGTCCTGTCTTCCTCTATAAACCCATATTCCTTTGCTTGAGCCTTCTTGG CAGCTCGCATGGCCTCATCCTCCTCCTCGTTGAATTTGAAACCACTACCACCATATCCAC TACCGTGTGACTGCTCTGTACCCTGGTTTACTTTGGCCATAAAGTCCTCAGCCAGCTTTT TTAAATCTTCCGGCACAGGCTGCTCTGACAGTTCTAAAGCTTTAACAAGATCAGGAGCAT ACCTTGATTCATCTGCCGAAATAAAGGTGACGGCTGTGCCTTTCCTCCCAGCTCTCCCTG TGCGGCCAACCCTATGAACATAATCCTCATAATGATTTGGTACATCATAGTTGACGACTA GCTCAAGCTCTTTCACATCCAAACCTCTGGCTGCGACACTCGTCGCAATCAGGAGATTGC ACACATTGCTCTTGAAATCACTAATGGTCGACTCCCTGTCTGTCTGTTCTTTTGCACCAT GCAAAGACAAGCATGGATATCCAACCTTCACAAGATCTTTGAAAAGATTGTCACATTTGT CTTGTGAGTGAACAAAGACAAGTATCTTACCCTTTTAAACCATTCACCCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84UQ1 |
Definition |
sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica |
Align length |
188 |
Score (bit) |
289.0 |
E-value |
8.0e-78 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BAX3 |
Definition |
tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
188 |
Score (bit) |
289.0 |
E-value |
9.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918636|Adiantum capillus-veneris mRNA, clone: YMU001_000115_G06. (591 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza... 289 9e-77 tr|A8MQH2|A8MQH2_ARATH Uncharacterized protein At1g20920.2 OS=Ar... 280 4e-74 tr|A3BPV3|A3BPV3_ORYSJ Putative uncharacterized protein OS=Oryza... 268 2e-70 tr|A3BPQ7|A3BPQ7_ORYSJ Putative uncharacterized protein OS=Oryza... 241 2e-62 tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella paten... 238 2e-61 tr|A8J3N3|A8J3N3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 223 5e-57 tr|Q012E3|Q012E3_OSTTA DEAD-box protein abstrakt (ISS) OS=Ostreo... 217 5e-55 tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome ... 209 9e-53 tr|A7S034|A7S034_NEMVE Predicted protein OS=Nematostella vectens... 190 6e-47 tr|B4L2J1|B4L2J1_DROMO GI15175 OS=Drosophila mojavensis GN=GI151... 184 3e-45 tr|B4M7U8|B4M7U8_DROVI GJ17053 OS=Drosophila virilis GN=GJ17053 ... 183 7e-45 tr|B4MSR4|B4MSR4_DROWI GK20023 OS=Drosophila willistoni GN=GK200... 181 2e-44 tr|B3S7I1|B3S7I1_TRIAD Putative uncharacterized protein OS=Trich... 181 4e-44 tr|A6R149|A6R149_AJECN Predicted protein OS=Ajellomyces capsulat... 179 1e-43 tr|B4PWL8|B4PWL8_DROYA GE17181 OS=Drosophila yakuba GN=GE17181 P... 176 1e-42 tr|B3MR88|B3MR88_DROAN GF21236 OS=Drosophila ananassae GN=GF2123... 176 1e-42 tr|A8K6X3|A8K6X3_HUMAN cDNA FLJ78679, highly similar to Homo sap... 175 2e-42 tr|B3NTM0|B3NTM0_DROER GG17877 OS=Drosophila erecta GN=GG17877 P... 175 2e-42 tr|Q29G56|Q29G56_DROPS GA19457 OS=Drosophila pseudoobscura pseud... 174 3e-42 tr|B4GVY8|B4GVY8_DROPE GL14575 OS=Drosophila persimilis GN=GL145... 174 3e-42 tr|B0WGF2|B0WGF2_CULQU Putative uncharacterized protein OS=Culex... 174 3e-42 tr|Q9VXW2|Q9VXW2_DROME CG6227 OS=Drosophila melanogaster GN=CG62... 174 3e-42 tr|Q95TU3|Q95TU3_DROME LD21880p OS=Drosophila melanogaster GN=CG... 174 3e-42 tr|Q16HL1|Q16HL1_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 174 4e-42 tr|B6L4I9|B6L4I9_BRAFL Putative uncharacterized protein OS=Branc... 174 4e-42 tr|B4ILG5|B4ILG5_DROSE GM20179 OS=Drosophila sechellia GN=GM2017... 174 4e-42 tr|B4JXG2|B4JXG2_DROGR GH17577 OS=Drosophila grimshawi GN=GH1757... 173 7e-42 tr|A8NXX3|A8NXX3_COPC7 Putative uncharacterized protein OS=Copri... 173 7e-42 tr|Q4RS24|Q4RS24_TETNG Chromosome 7 SCAF15001, whole genome shot... 172 1e-41 tr|B8NIU4|B8NIU4_ASPFL DEAD/DEAH box RNA helicase OS=Aspergillus... 172 1e-41
>tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27901 PE=4 SV=1 Length = 1049
Score = 289 bits (739), Expect = 9e-77 Identities = 145/188 (77%), Positives = 161/188 (85%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 KGKILVFVHSQDKCD+L KDL + GYPCLSLHG K+QTDREST++DFKSNVC+LLIATSV Sbjct: 671 KGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSV 730
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKAL 215 AARGLDVKELELVVNYDVPNHYEDYVH TFIS +E RYAPDLVKAL Sbjct: 731 AARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKAL 790
Query: 214 ELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEY 35 ELSEQ VPEDLK LA+ FMAKV QGTEQ+HG+GYGGSGFKFNEEEDEA ++AKKAQA+EY Sbjct: 791 ELSEQAVPEDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARKSAKKAQAREY 850
Query: 34 GFIEEDRT 11 G+ EED++ Sbjct: 851 GY-EEDKS 857
>tr|A8MQH2|A8MQH2_ARATH Uncharacterized protein At1g20920.2 OS=Arabidopsis thaliana GN=At1g20920 PE=3 SV=1 Length = 828
Score = 280 bits (716), Expect = 4e-74 Identities = 138/188 (73%), Positives = 158/188 (84%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 KGKILVFV SQ+KCD L++D++K YPCLSLHG K+QTDRESTISDFK++VCNLLIATSV Sbjct: 438 KGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSV 497
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKAL 215 AARGLDVKELELVVN+D PNHYEDYVH TFIS D+++YAPDLVKAL Sbjct: 498 AARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKAL 557
Query: 214 ELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEY 35 ELSEQPVP+DLK LA+ FM KV QG EQ+HG+GYGGSGFKFNEEE+E +AAKKAQAKEY Sbjct: 558 ELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEY 617
Query: 34 GFIEEDRT 11 GF EED++ Sbjct: 618 GF-EEDKS 624
>tr|A3BPV3|A3BPV3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025075 PE=3 SV=1 Length = 1039
Score = 268 bits (685), Expect = 2e-70 Identities = 134/178 (75%), Positives = 151/178 (84%) Frame = -3
Query: 544 QDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSVAARGLDVKEL 365 +DKCD+L KDL + GYPCLSLHG K+QTDREST++DFKSNVC+LLIATSVAARGLDVKEL Sbjct: 671 KDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAARGLDVKEL 730
Query: 364 ELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKALELSEQPVPED 185 ELVVNYDVPNHYEDYVH TFIS +E RYAPDLVKALELSEQ VPED Sbjct: 731 ELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKALELSEQAVPED 790
Query: 184 LKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEYGFIEEDRT 11 LK LA+ FMAKV QGTEQ+HG+GYGGSGFKFNEEEDEA ++AKKAQA+EYG+ EED++ Sbjct: 791 LKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARKSAKKAQAREYGY-EEDKS 847
>tr|A3BPQ7|A3BPQ7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025029 PE=4 SV=1 Length = 1574
Score = 241 bits (615), Expect = 2e-62 Identities = 125/188 (66%), Positives = 141/188 (75%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 +GKILVFVHSQDKCD+L KDL + GYPCLSLHG K+QTDREST++DFKSN Sbjct: 1159 RGKILVFVHSQDKCDSLLKDLFQRGYPCLSLHGGKDQTDRESTLADFKSN---------- 1208
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKAL 215 LELVVNYDVPNHYEDYVH TFIS +E RYAPDL KAL Sbjct: 1209 ---------LELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAKAL 1259
Query: 214 ELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEY 35 ELSEQ VP+DLK LA+ FMAKV QGTEQ+HG+GYGGSGFKFNEEEDEA R+AKKAQA+EY Sbjct: 1260 ELSEQAVPQDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARRSAKKAQAREY 1319
Query: 34 GFIEEDRT 11 G+ EED++ Sbjct: 1320 GY-EEDKS 1326
>tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149955 PE=3 SV=1 Length = 1072
Score = 238 bits (607), Expect = 2e-61 Identities = 124/186 (66%), Positives = 139/186 (74%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 KGKILVFVHSQ+K ESTI+DFK++VCNL+IATS+ Sbjct: 725 KGKILVFVHSQEK---------------------------ESTITDFKTSVCNLMIATSI 757
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKAL 215 AARGLDVKELELVVNYDVPNHYEDYVH TFIS +E RYAPDLVKAL Sbjct: 758 AARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISTEEERYAPDLVKAL 817
Query: 214 ELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEY 35 ELSEQP+PEDLKKLA+DFM KV QG+EQ+HGSGYGGSGFKFNEEEDEA++AAKKAQA+EY Sbjct: 818 ELSEQPIPEDLKKLADDFMVKVKQGSEQAHGSGYGGSGFKFNEEEDEALKAAKKAQAREY 877
Query: 34 GFIEED 17 GF EE+ Sbjct: 878 GFEEEE 883
>tr|A8J3N3|A8J3N3_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_118630 PE=3 SV=1 Length = 710
Score = 223 bits (569), Expect = 5e-57 Identities = 111/183 (60%), Positives = 135/183 (73%), Gaps = 2/183 (1%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 +GK+L+FV Q+ CDNLF+DL++ GYPCLSLHG K+Q+DRESTI+DFK VCN+L+ATS+ Sbjct: 301 RGKLLIFVDKQESCDNLFRDLLRYGYPCLSLHGGKDQSDRESTIADFKGAVCNILVATSI 360
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVH--XXXXXXXXXXXXXXXTFISADESRYAPDLVK 221 AARGLDVK+L LVVNYDVPNH+EDYVH TFIS +E RYAPDLVK Sbjct: 361 AARGLDVKDLVLVVNYDVPNHHEDYVHRCVVGRTGRAGAKGTAITFISEEEERYAPDLVK 420
Query: 220 ALELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAK 41 AL S PVP+DL+ LA+ F K G ++HGSGYGGSGFKF+ E+E R KKA+AK Sbjct: 421 ALRESGAPVPQDLQALADSFNTKHKAGLVKAHGSGYGGSGFKFDTNEEERHRTDKKAKAK 480
Query: 40 EYG 32 G Sbjct: 481 AMG 483
>tr|Q012E3|Q012E3_OSTTA DEAD-box protein abstrakt (ISS) OS=Ostreococcus tauri GN=Ot09g00780 PE=3 SV=1 Length = 1030
Score = 217 bits (552), Expect = 5e-55 Identities = 106/186 (56%), Positives = 139/186 (74%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 +GKI++FV SQDK D+ FK+L+K GYPCLSLHG+KEQ+DR STISDFKS+VCN+L+ATSV Sbjct: 577 RGKIIIFVASQDKADSTFKELLKSGYPCLSLHGSKEQSDRHSTISDFKSDVCNILVATSV 636
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKAL 215 AARGLDVK+L LV+NYD PNH EDYVH TFIS DE ++APDLVKAL Sbjct: 637 AARGLDVKDLRLVINYDTPNHLEDYVHRVGRTGRAGQKGTAVTFISEDEEKFAPDLVKAL 696
Query: 214 ELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEY 35 + S+Q VP D+++LA++F K +G + GSG+GGSGFKF++ E +A++ K+ A+ Sbjct: 697 KDSKQTVPRDVQRLADEFTRKRKEGLVGAAGSGFGGSGFKFDQGEHDALKKQKRDAARAA 756
Query: 34 GFIEED 17 G +D Sbjct: 757 GLEIDD 762
>tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036305001 PE=4 SV=1 Length = 971
Score = 209 bits (532), Expect = 9e-53 Identities = 107/142 (75%), Positives = 118/142 (83%) Frame = -3
Query: 436 FKSNVCNLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFIS 257 + SNVCNLLIATSVAARGLDVKELELV+N+DVPNHYEDYVH TFIS Sbjct: 637 YLSNVCNLLIATSVAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGSAITFIS 696
Query: 256 ADESRYAPDLVKALELSEQPVPEDLKKLAEDFMAKVNQGTEQSHGSGYGGSGFKFNEEED 77 D++RYAPDLVKALELSEQ VP+DLK LA+ FMAKVNQG EQ+HG+GYGGSGFKFNEEED Sbjct: 697 DDDARYAPDLVKALELSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEED 756
Query: 76 EAMRAAKKAQAKEYGFIEEDRT 11 E RAAKKAQAKEYGF EED++ Sbjct: 757 EVRRAAKKAQAKEYGF-EEDKS 777
>tr|A7S034|A7S034_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g164776 PE=3 SV=1 Length = 794
Score = 190 bits (482), Expect = 6e-47 Identities = 96/187 (51%), Positives = 124/187 (66%), Gaps = 1/187 (0%) Frame = -3
Query: 574 KGKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSV 395 +G +LVFV QD D+LFKDL+K YPCLSLHG +Q DR+STI+DFK+ V L+IATSV Sbjct: 384 QGSVLVFVEKQDSADSLFKDLLKRSYPCLSLHGGMDQFDRDSTIADFKNGVTKLMIATSV 443
Query: 394 AARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKAL 215 AARGLDVK L LVVNYD PNHYEDYVH TF++ ++ R+A D++KAL Sbjct: 444 AARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLTPEQGRFAIDVIKAL 503
Query: 214 ELSEQPVPEDLKKLAEDFM-AKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKE 38 E++E PVPED++ LA ++ + +G SG+ G GFKFN+EE + AKK Q Sbjct: 504 EMAENPVPEDVRNLANTYIETRKAEGKNIVKNSGFSGKGFKFNDEEKAKVSEAKKIQKWA 563
Query: 37 YGFIEED 17 G + D Sbjct: 564 LGLQDSD 570
>tr|B4L2J1|B4L2J1_DROMO GI15175 OS=Drosophila mojavensis GN=GI15175 PE=4 SV=1 Length = 1229
Score = 184 bits (467), Expect = 3e-45 Identities = 97/186 (52%), Positives = 122/186 (65%), Gaps = 1/186 (0%) Frame = -3
Query: 571 GKILVFVHSQDKCDNLFKDLVKVGYPCLSLHGAKEQTDRESTISDFKSNVCNLLIATSVA 392 G I+VFV Q+ D L +DL+K YPC+SLHG +Q DR+STI DFKS LLIATSVA Sbjct: 781 GSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 840
Query: 391 ARGLDVKELELVVNYDVPNHYEDYVHXXXXXXXXXXXXXXXTFISADESRYAPDLVKALE 212 ARGLDVK+L LVVNYDVPNHYEDYVH TFI+ ++SRYA D+++ALE Sbjct: 841 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGCAFTFITPEQSRYAGDVIRALE 900
Query: 211 LSEQPVPEDLKKLAEDF-MAKVNQGTEQSHGSGYGGSGFKFNEEEDEAMRAAKKAQAKEY 35 LS PVP DL+ L D+ A+ +G G G+ G GFKF+E+E A++ +KK Q Sbjct: 901 LSGTPVPPDLQTLWNDYKAAQEAEGKTVHTGGGFSGKGFKFDEQEFNAVKESKKLQKAAL 960
Query: 34 GFIEED 17 G + D Sbjct: 961 GLADSD 966
|