BP918645 |
Clone id |
YMU001_000115_H03 |
Library |
YMU01 |
Length |
529 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000115_H03. |
Accession |
BP918645 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2451Contig1 |
Sequence |
GCTGTCCCCCTGCATGGTTAGAATTAATGCCCACGGCTTGTCTCGCAGCTTCTTCTTTCG GGAAGCTACTGCCTTCCTGACCCGGTACTTTCGTTGGTGACCGAGAGCCATCAAGCATTG AAACATTCCCCGAAGATGGCAGCTGCAACTCTTTACAAATGTAAGACTTCAGATCAGACT CAGTATCCTCGATTATTTCTTGCCAGCGCCCATAACCATGCTTTAAGATGGCTTGCAGAA GCTTCCAATCCTGTGGCTCCTTCCAAAACCTGGCATTCACCAGCCCAGGAAGCCTCTTGT AGACATCATCAGAAAAAAGAGCAATCTTAGATACATCTTTGACATCTTTCACTTTGTCTT GTATTAGGTGTAAAATCGCAAGCCGCACCAAAACATCCTGAATTCGAAGTCCTTCCTTTG GGACGCCGTCTGAAAAATTTGGAGAGTCCGATATATCCTCAGCAATATGGGTTAAAAAAA GAGTCCCATATCTTGTAATTTCCTCTGCTGTTTGTGGTTTCATTCTTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S775 |
Definition |
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana |
Align length |
155 |
Score (bit) |
139.0 |
E-value |
6.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918645|Adiantum capillus-veneris mRNA, clone: YMU001_000115_H03. (529 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE... 139 6e-33 sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 47 6e-05 sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 44 4e-04 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 44 4e-04 sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 44 5e-04 sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 42 0.001 sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 42 0.002 sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar... 37 0.059 sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Sacch... 33 0.85 sp|P09442|DH11_GOSHI Late embryogenesis abundant protein D-11 OS... 32 2.5 sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2... 32 2.5 sp|Q3IRT1|HIS8_NATPD Histidinol-phosphate aminotransferase OS=Na... 31 4.1 sp|Q8BP86|SNPC4_MOUSE snRNA-activating protein complex subunit 4... 31 4.2 sp|Q8N149|LIRA2_HUMAN Leukocyte immunoglobulin-like receptor sub... 31 4.2 sp|Q7Z2K8|GRIN1_HUMAN G protein-regulated inducer of neurite out... 31 4.2 sp|Q9I8J6|EBP2_XENLA Probable rRNA-processing protein EBP2 OS=Xe... 31 4.2 sp|A1U7H2|GLMU_MARAV Bifunctional protein glmU OS=Marinobacter a... 30 5.4 sp|Q5SXM2|SNPC4_HUMAN snRNA-activating protein complex subunit 4... 30 5.5 sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar... 30 5.5 sp|Q4AAS1|SYI_MYCHJ Isoleucyl-tRNA synthetase OS=Mycoplasma hyop... 30 7.2 sp|Q4A8Y0|SYI_MYCH7 Isoleucyl-tRNA synthetase OS=Mycoplasma hyop... 30 7.2 sp|Q602B7|SYI_MYCH2 Isoleucyl-tRNA synthetase OS=Mycoplasma hyop... 30 7.2 sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1... 30 7.2 sp|Q5UR99|YL573_MIMIV Uncharacterized protein L573 OS=Acanthamoe... 30 9.4 sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5 OS=... 30 9.4
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1 Length = 1384
Score = 139 bits (351), Expect = 6e-33 Identities = 73/155 (47%), Positives = 99/155 (63%), Gaps = 1/155 (0%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQXX 353 PR+K +T EEI YG LFL HIAE+I + SP FSDGVPKEGLRI+DVLVR+A+L L+Q Sbjct: 980 PRLKQKTFEEINEYGILFLKHIAEEIDENSPTFSDGVPKEGLRIEDVLVRIALLILVQEK 1039
Query: 352 XXXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESD 173 +F + +R PGL + + WKE D +++A+LKHGYGRWQ I++D E Sbjct: 1040 VKFVEDHPGKPVFPSRILERFPGLRSGKIWKEEHDKIMIRAVLKHGYGRWQAIVDDKELG 1099
Query: 172 LKSYICKELQLPSSGNVSMLDGSRSPTKVPGQEGS 68 ++ ICKEL P ++S+ + + GQ GS Sbjct: 1100 IQELICKELNFP---HISL--SAAEQAGLQGQNGS 1129
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3 Length = 2000
Score = 47.0 bits (110), Expect = 6e-05 Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%) Frame = -1
Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359 ++ +T +E Y +LF+ H+ E +D S F+DGVP+EGL Q VL R+ ++ L++ Sbjct: 1444 LRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVK 1499
Score = 33.9 bits (76), Expect = 0.50 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIEDTE 179 W D+ LL I+ HGY RWQ+I D + Sbjct: 1740 WHRRHDYWLLAGIVLHGYARWQDIQNDAQ 1768
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4 PE=1 SV=1 Length = 1915
Score = 44.3 bits (103), Expect = 4e-04 Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%) Frame = -1
Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359 ++ ++ +E Y +LF+ H+ E +D + F+DGVP+EGL Q VL R+ ++ LI+ Sbjct: 1441 LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIR 1496
Score = 34.3 bits (77), Expect = 0.38 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185 W D+ LL I+ HGY RWQ+I D Sbjct: 1732 WHRRHDYWLLAGIINHGYARWQDIQND 1758
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=1 Length = 1912
Score = 44.3 bits (103), Expect = 4e-04 Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%) Frame = -1
Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359 ++ ++ +E Y +LF+ H+ E +D + F+DGVP+EGL Q VL R+ ++ LI+ Sbjct: 1448 LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIR 1503
Score = 34.3 bits (77), Expect = 0.38 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185 W D+ LL I+ HGY RWQ+I D Sbjct: 1729 WHRRHDYWLLAGIINHGYARWQDIQND 1755
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=2 SV=1 Length = 1954
Score = 43.9 bits (102), Expect = 5e-04 Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 1/56 (1%) Frame = -1
Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359 ++ ++ +E Y +LF+ H+ E +D + F+DGVP+EGL Q VL R+ ++ L++ Sbjct: 1456 LRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVR 1511
Score = 33.5 bits (75), Expect = 0.65 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185 W D+ LL I+ HGY RWQ+I D Sbjct: 1736 WHRRHDYWLLAGIVTHGYARWQDIQND 1762
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2 Length = 1787
Score = 42.4 bits (98), Expect = 0.001 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Frame = -1
Query: 490 YGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359 Y +LF+ H+ E + D S +F DGVP+EGL Q VL R+ ++ +++ Sbjct: 1357 YSSLFMRHLCEPVVDNSDSFMDGVPREGLNRQAVLSRIGLMSILR 1401
Score = 30.8 bits (68), Expect = 4.2 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIEDTESDLKSYICKE 149 W D+ LL A+ +GYGR+Q +D +D K I E Sbjct: 1515 WHRRHDFWLLAAVAVYGYGRYQINFQDIMNDPKFSIVNE 1553
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2 Length = 1982
Score = 42.0 bits (97), Expect = 0.002 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = -1
Query: 523 MKPQTAEEITRYGTLFLTHIAEDISDSPN-FSDGVPKEGLRIQDVLVRLAILHLIQ 359 ++ ++ Y +LF+ H+ E +D+ F+DGVP+EGL Q VL R+ ++ LI+ Sbjct: 1443 LRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIR 1498
Score = 35.8 bits (81), Expect = 0.13 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185 W D+ LL I+ HGYGRWQ+I D Sbjct: 1759 WHRRHDYWLLAGIVTHGYGRWQDIQND 1785
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe GN=hrp3 PE=1 SV=1 Length = 1388
Score = 37.0 bits (84), Expect = 0.059 Identities = 22/61 (36%), Positives = 27/61 (44%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIEDTESDLKSYICKELQLPSSGNVSMLDGSRSPTKV 86 W +D LL I KHG+G W EI +D E +K I E + N D KV Sbjct: 1123 WGPREDSMLLSGICKHGFGAWLEIRDDPELKMKDKIFLE-DTKQTDNSVPKDKENKEKKV 1181
Query: 85 P 83 P Sbjct: 1182 P 1182
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae GN=CHD1 PE=1 SV=1 Length = 1468
Score = 33.1 bits (74), Expect = 0.85 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -1
Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185 W + +D KLL + K+GYG W +I +D Sbjct: 1175 WTKEEDEKLLIGVFKYGYGSWTQIRDD 1201
>sp|P09442|DH11_GOSHI Late embryogenesis abundant protein D-11 OS=Gossypium hirsutum PE=2 SV=1 Length = 145
Score = 31.6 bits (70), Expect = 2.5 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -1
Query: 136 SSGNVSMLDGSRSPTKVPGQEGSSFPKEEAARQAVGINSNHAGG 5 S+ V+ D +PT+ + G+ P +E R +GI +H GG Sbjct: 9 SAPEVTQTDAYGNPTRRTDEYGNPIPTQETGRGILGIGGHHHGG 52
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P5Y1 |
Definition |
tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
145 |
Score (bit) |
152.0 |
E-value |
8.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918645|Adiantum capillus-veneris mRNA, clone: YMU001_000115_H03. (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome ... 152 8e-36 tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 146 7e-34 tr|A5BRA6|A5BRA6_VITVI Putative uncharacterized protein OS=Vitis... 141 2e-32 tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 135 1e-30 tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza... 106 6e-22 tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza... 106 6e-22 tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ... 106 6e-22 tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza... 106 6e-22 tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza... 106 6e-22 tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g3190... 84 3e-15 tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza... 78 2e-13 tr|Q4S447|Q4S447_TETNG Chromosome 20 SCAF14744, whole genome sho... 47 5e-04 tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04 tr|Q2KML0|Q2KML0_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04 tr|Q2KMK9|Q2KMK9_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04 tr|Q2KMK7|Q2KMK7_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04 tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein... 47 6e-04 tr|B1AR16|B1AR16_MOUSE Chromodomain helicase DNA binding protein... 47 6e-04 tr|Q2TAZ1|Q2TAZ1_HUMAN CHD3 protein (Fragment) OS=Homo sapiens G... 47 6e-04 tr|B4DLC6|B4DLC6_HUMAN cDNA FLJ59330, highly similar to Chromodo... 47 6e-04 tr|B3KWV4|B3KWV4_HUMAN cDNA FLJ43940 fis, clone TESTI4014175, hi... 47 6e-04 tr|A8Q9I0|A8Q9I0_BRUMA CHD4 protein, putative OS=Brugia malayi G... 45 0.002 tr|B4DKV1|B4DKV1_HUMAN cDNA FLJ58804, highly similar to Chromodo... 45 0.003 tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=c... 44 0.004 tr|Q4SNF1|Q4SNF1_TETNG Chromosome 8 SCAF14543, whole genome shot... 44 0.004 tr|Q4QRH1|Q4QRH1_DANRE Wu:fd12d03 protein (Fragment) OS=Danio re... 44 0.004 tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate chrom... 44 0.004 tr|O73820|O73820_XENLA Mi-2 (Fragment) OS=Xenopus laevis PE=2 SV=1 44 0.004 tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd... 44 0.004 tr|Q99JM0|Q99JM0_MOUSE Chd4 protein (Fragment) OS=Mus musculus G... 44 0.004
>tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032704001 PE=4 SV=1 Length = 891
Score = 152 bits (385), Expect = 8e-36 Identities = 76/145 (52%), Positives = 97/145 (66%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K +T EEI YGTLFL HI+EDI+DSP FSDGVPKEGLRI DVLVR+A+L L++ Sbjct: 415 PRLKQKTFEEIKDYGTLFLAHISEDITDSPTFSDGVPKEGLRIPDVLVRIAVLLLVRDKV 474
Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170 LF DD+ R PGL R WKE D LL+A++KHGYGRWQ I++D + + Sbjct: 475 KLALEKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKV 534
Query: 169 KSYICKELQLPSSGNVSMLDGSRSP 95 + IC+E LP N + GS++P Sbjct: 535 QEVICQEQNLPFI-NFPVPGGSQAP 558
>tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1504 PE=4 SV=1 Length = 1245
Score = 146 bits (368), Expect = 7e-34 Identities = 88/168 (52%), Positives = 104/168 (61%), Gaps = 4/168 (2%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+KP+T EEI YGTLFL+HIAEDI+DSP FSDGVPKEGLRIQDVLVRLAILHLI+ Sbjct: 1015 PRLKPKTPEEIKDYGTLFLSHIAEDINDSPFFSDGVPKEGLRIQDVLVRLAILHLIRDKV 1074
Query: 349 XXXXXVSKIALFSDDVY-KRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESD 173 I LFS + R L N + WKE D KLL AI HGYGRW I+ED + Sbjct: 1075 KALSEDPSIPLFSPGSHIYRYYSLRNTKVWKEEHDRKLLYAICSHGYGRWLSIVEDPQLG 1134
Query: 172 LKSYICKELQLPSSGNVS--MLDGSRSPTKVPGQ-EGSSFPKEEAARQ 38 L I EL L +++ +G+ T VP + EG S EA R+ Sbjct: 1135 LGPVIRGELLLRGVNDIAGPSKNGNARSTPVPAEDEGPSGLPAEADRE 1182
>tr|A5BRA6|A5BRA6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043255 PE=4 SV=1 Length = 755
Score = 141 bits (355), Expect = 2e-32 Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 22/167 (13%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K +T EEI YGTLFL HI+EDI+DSP FSDGVPKEGLRI DVLVR+A+L L++ Sbjct: 257 PRLKQKTFEEIKDYGTLFLAHISEDITDSPTFSDGVPKEGLRIPDVLVRIAVLLLVRDKP 316
Query: 349 XXXXXVS---------------KIAL-------FSDDVYKRLPGLVNARFWKEPQDWKLL 236 K+AL F DD+ R PGL R WKE D LL Sbjct: 317 SSVRETLLSWHGSFVGKKRKKVKLALEKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLL 376
Query: 235 QAILKHGYGRWQEIIEDTESDLKSYICKELQLPSSGNVSMLDGSRSP 95 +A++KHGYGRWQ I++D + ++ IC+E LP N + GS++P Sbjct: 377 RAVIKHGYGRWQAIVDDKDLKVQEVICQEQNLPFI-NFPVPGGSQAP 422
>tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1512 PE=4 SV=1 Length = 1220
Score = 135 bits (340), Expect = 1e-30 Identities = 76/132 (57%), Positives = 88/132 (66%), Gaps = 2/132 (1%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+KP+T EEI YGTLFL+HIAEDI+DSP FSDG+PKEGLRIQDVLVRLAILHLI+ Sbjct: 1006 PRLKPKTPEEIKDYGTLFLSHIAEDINDSPFFSDGIPKEGLRIQDVLVRLAILHLIRDKV 1065
Query: 349 XXXXXVSKIALFSDDVYK-RLPGLVNARFWKEPQDWKLLQAIL-KHGYGRWQEIIEDTES 176 + LFS + R L N + WKE D KLL AI +HGYGRW I+ED + Sbjct: 1066 KALTEDPAMPLFSQGSHMYRYYSLRNTKVWKEEHDRKLLYAICSRHGYGRWLSIVEDPQL 1125
Query: 175 DLKSYICKELQL 140 L I EL L Sbjct: 1126 GLGPVIRGELLL 1137
>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza sativa GN=PKL PE=2 SV=1 Length = 1360
Score = 106 bits (265), Expect = 6e-22 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++ Sbjct: 995 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1053
Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170 LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ + Sbjct: 1054 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1113
Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59 +EL+LP++ L S S + G QEG S P Sbjct: 1114 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1152
>tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza sativa subsp. japonica GN=OSJNBb0036B04.22 PE=4 SV=1 Length = 1354
Score = 106 bits (265), Expect = 6e-22 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++ Sbjct: 989 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1047
Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170 LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ + Sbjct: 1048 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1107
Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59 +EL+LP++ L S S + G QEG S P Sbjct: 1108 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1146
>tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0183800 PE=4 SV=1 Length = 1335
Score = 106 bits (265), Expect = 6e-22 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++ Sbjct: 970 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1028
Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170 LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ + Sbjct: 1029 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1088
Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59 +EL+LP++ L S S + G QEG S P Sbjct: 1089 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1127
>tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21929 PE=4 SV=1 Length = 1309
Score = 106 bits (265), Expect = 6e-22 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++ Sbjct: 944 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1002
Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170 LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ + Sbjct: 1003 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1062
Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59 +EL+LP++ L S S + G QEG S P Sbjct: 1063 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1101
>tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019537 PE=4 SV=1 Length = 1364
Score = 106 bits (265), Expect = 6e-22 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%) Frame = -1
Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350 PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++ Sbjct: 999 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1057
Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170 LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ + Sbjct: 1058 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1117
Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59 +EL+LP++ L S S + G QEG S P Sbjct: 1118 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1156
>tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g31900 OS=Arabidopsis thaliana GN=AT4g31900 PE=2 SV=1 Length = 1067
Score = 84.3 bits (207), Expect = 3e-15 Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 9/128 (7%) Frame = -1
Query: 493 RYGTLFLTHIAEDISD-SPNF--------SDGVPKEGLRIQDVLVRLAILHLIQXXXXXX 341 RYG LFL HIAE+ +D S NF +DGVPKEG+ ++LV + + L++ Sbjct: 793 RYGILFLKHIAENPTDNSTNFKVITAMVYADGVPKEGISSDELLVSMTFMMLVKEKCQFL 852
Query: 340 XXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDLKSY 161 +FS+ V + L N F KE D L+ A+ KHGYGRW I+ED E + Sbjct: 853 DNHPTAPVFSNYVISKY-NLRNGAFSKEEHDRILIPAVSKHGYGRWVAIVEDEEIGFQEV 911
Query: 160 ICKELQLP 137 CK+L +P Sbjct: 912 ACKDLNIP 919
|