BP918645
Clone id YMU001_000115_H03
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCTGTCCCCCTGCATGGTTAGAATTAATGCCCACGGCTTGTCTCGCAGCTTCTTCTTTCG
GGAAGCTACTGCCTTCCTGACCCGGTACTTTCGTTGGTGACCGAGAGCCATCAAGCATTG
AAACATTCCCCGAAGATGGCAGCTGCAACTCTTTACAAATGTAAGACTTCAGATCAGACT
CAGTATCCTCGATTATTTCTTGCCAGCGCCCATAACCATGCTTTAAGATGGCTTGCAGAA
GCTTCCAATCCTGTGGCTCCTTCCAAAACCTGGCATTCACCAGCCCAGGAAGCCTCTTGT
AGACATCATCAGAAAAAAGAGCAATCTTAGATACATCTTTGACATCTTTCACTTTGTCTT
GTATTAGGTGTAAAATCGCAAGCCGCACCAAAACATCCTGAATTCGAAGTCCTTCCTTTG
GGACGCCGTCTGAAAAATTTGGAGAGTCCGATATATCCTCAGCAATATGGGTTAAAAAAA
GAGTCCCATATCTTGTAATTTCCTCTGCTGTTTGTGGTTTCATTCTTGG
■■Homology search results ■■ -
sp_hit_id Q9S775
Definition sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana
Align length 155
Score (bit) 139.0
E-value 6.0e-33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918645|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_H03.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE... 139 6e-33
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 47 6e-05
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 44 4e-04
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 44 4e-04
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 44 5e-04
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 42 0.001
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 42 0.002
sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar... 37 0.059
sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Sacch... 33 0.85
sp|P09442|DH11_GOSHI Late embryogenesis abundant protein D-11 OS... 32 2.5
sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2... 32 2.5
sp|Q3IRT1|HIS8_NATPD Histidinol-phosphate aminotransferase OS=Na... 31 4.1
sp|Q8BP86|SNPC4_MOUSE snRNA-activating protein complex subunit 4... 31 4.2
sp|Q8N149|LIRA2_HUMAN Leukocyte immunoglobulin-like receptor sub... 31 4.2
sp|Q7Z2K8|GRIN1_HUMAN G protein-regulated inducer of neurite out... 31 4.2
sp|Q9I8J6|EBP2_XENLA Probable rRNA-processing protein EBP2 OS=Xe... 31 4.2
sp|A1U7H2|GLMU_MARAV Bifunctional protein glmU OS=Marinobacter a... 30 5.4
sp|Q5SXM2|SNPC4_HUMAN snRNA-activating protein complex subunit 4... 30 5.5
sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar... 30 5.5
sp|Q4AAS1|SYI_MYCHJ Isoleucyl-tRNA synthetase OS=Mycoplasma hyop... 30 7.2
sp|Q4A8Y0|SYI_MYCH7 Isoleucyl-tRNA synthetase OS=Mycoplasma hyop... 30 7.2
sp|Q602B7|SYI_MYCH2 Isoleucyl-tRNA synthetase OS=Mycoplasma hyop... 30 7.2
sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1... 30 7.2
sp|Q5UR99|YL573_MIMIV Uncharacterized protein L573 OS=Acanthamoe... 30 9.4
sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5 OS=... 30 9.4

>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE
OS=Arabidopsis thaliana GN=PKL PE=1 SV=1
Length = 1384

Score = 139 bits (351), Expect = 6e-33
Identities = 73/155 (47%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQXX 353
PR+K +T EEI YG LFL HIAE+I + SP FSDGVPKEGLRI+DVLVR+A+L L+Q
Sbjct: 980 PRLKQKTFEEINEYGILFLKHIAEEIDENSPTFSDGVPKEGLRIEDVLVRIALLILVQEK 1039

Query: 352 XXXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESD 173
+F + +R PGL + + WKE D +++A+LKHGYGRWQ I++D E
Sbjct: 1040 VKFVEDHPGKPVFPSRILERFPGLRSGKIWKEEHDKIMIRAVLKHGYGRWQAIVDDKELG 1099

Query: 172 LKSYICKELQLPSSGNVSMLDGSRSPTKVPGQEGS 68
++ ICKEL P ++S+ + + GQ GS
Sbjct: 1100 IQELICKELNFP---HISL--SAAEQAGLQGQNGS 1129


>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3
OS=Homo sapiens GN=CHD3 PE=1 SV=3
Length = 2000

Score = 47.0 bits (110), Expect = 6e-05
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1

Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359
++ +T +E Y +LF+ H+ E +D S F+DGVP+EGL Q VL R+ ++ L++
Sbjct: 1444 LRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVK 1499



Score = 33.9 bits (76), Expect = 0.50
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIEDTE 179
W D+ LL I+ HGY RWQ+I D +
Sbjct: 1740 WHRRHDYWLLAGIVLHGYARWQDIQNDAQ 1768


>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4
OS=Mus musculus GN=Chd4 PE=1 SV=1
Length = 1915

Score = 44.3 bits (103), Expect = 4e-04
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1

Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359
++ ++ +E Y +LF+ H+ E +D + F+DGVP+EGL Q VL R+ ++ LI+
Sbjct: 1441 LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIR 1496



Score = 34.3 bits (77), Expect = 0.38
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185
W D+ LL I+ HGY RWQ+I D
Sbjct: 1732 WHRRHDYWLLAGIINHGYARWQDIQND 1758


>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4
OS=Homo sapiens GN=CHD4 PE=1 SV=1
Length = 1912

Score = 44.3 bits (103), Expect = 4e-04
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1

Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359
++ ++ +E Y +LF+ H+ E +D + F+DGVP+EGL Q VL R+ ++ LI+
Sbjct: 1448 LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIR 1503



Score = 34.3 bits (77), Expect = 0.38
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185
W D+ LL I+ HGY RWQ+I D
Sbjct: 1729 WHRRHDYWLLAGIINHGYARWQDIQND 1755


>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5
OS=Homo sapiens GN=CHD5 PE=2 SV=1
Length = 1954

Score = 43.9 bits (102), Expect = 5e-04
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1

Query: 523 MKPQTAEEITRYGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359
++ ++ +E Y +LF+ H+ E +D + F+DGVP+EGL Q VL R+ ++ L++
Sbjct: 1456 LRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVR 1511



Score = 33.5 bits (75), Expect = 0.65
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185
W D+ LL I+ HGY RWQ+I D
Sbjct: 1736 WHRRHDYWLLAGIVTHGYARWQDIQND 1762


>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3
homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787

Score = 42.4 bits (98), Expect = 0.001
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = -1

Query: 490 YGTLFLTHIAEDISD-SPNFSDGVPKEGLRIQDVLVRLAILHLIQ 359
Y +LF+ H+ E + D S +F DGVP+EGL Q VL R+ ++ +++
Sbjct: 1357 YSSLFMRHLCEPVVDNSDSFMDGVPREGLNRQAVLSRIGLMSILR 1401



Score = 30.8 bits (68), Expect = 4.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIEDTESDLKSYICKE 149
W D+ LL A+ +GYGR+Q +D +D K I E
Sbjct: 1515 WHRRHDFWLLAAVAVYGYGRYQINFQDIMNDPKFSIVNE 1553


>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2
homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982

Score = 42.0 bits (97), Expect = 0.002
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -1

Query: 523 MKPQTAEEITRYGTLFLTHIAEDISDSPN-FSDGVPKEGLRIQDVLVRLAILHLIQ 359
++ ++ Y +LF+ H+ E +D+ F+DGVP+EGL Q VL R+ ++ LI+
Sbjct: 1443 LRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIR 1498



Score = 35.8 bits (81), Expect = 0.13
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185
W D+ LL I+ HGYGRWQ+I D
Sbjct: 1759 WHRRHDYWLLAGIVTHGYGRWQDIQND 1785


>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3
OS=Schizosaccharomyces pombe GN=hrp3 PE=1 SV=1
Length = 1388

Score = 37.0 bits (84), Expect = 0.059
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIEDTESDLKSYICKELQLPSSGNVSMLDGSRSPTKV 86
W +D LL I KHG+G W EI +D E +K I E + N D KV
Sbjct: 1123 WGPREDSMLLSGICKHGFGAWLEIRDDPELKMKDKIFLE-DTKQTDNSVPKDKENKEKKV 1181

Query: 85 P 83
P
Sbjct: 1182 P 1182


>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1
OS=Saccharomyces cerevisiae GN=CHD1 PE=1 SV=1
Length = 1468

Score = 33.1 bits (74), Expect = 0.85
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1

Query: 265 WKEPQDWKLLQAILKHGYGRWQEIIED 185
W + +D KLL + K+GYG W +I +D
Sbjct: 1175 WTKEEDEKLLIGVFKYGYGSWTQIRDD 1201


>sp|P09442|DH11_GOSHI Late embryogenesis abundant protein D-11
OS=Gossypium hirsutum PE=2 SV=1
Length = 145

Score = 31.6 bits (70), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1

Query: 136 SSGNVSMLDGSRSPTKVPGQEGSSFPKEEAARQAVGINSNHAGG 5
S+ V+ D +PT+ + G+ P +E R +GI +H GG
Sbjct: 9 SAPEVTQTDAYGNPTRRTDEYGNPIPTQETGRGILGIGGHHHGG 52


tr_hit_id A7P5Y1
Definition tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 145
Score (bit) 152.0
E-value 8.0e-36
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918645|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_H03.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome ... 152 8e-36
tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 146 7e-34
tr|A5BRA6|A5BRA6_VITVI Putative uncharacterized protein OS=Vitis... 141 2e-32
tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 135 1e-30
tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza... 106 6e-22
tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza... 106 6e-22
tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ... 106 6e-22
tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza... 106 6e-22
tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza... 106 6e-22
tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g3190... 84 3e-15
tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza... 78 2e-13
tr|Q4S447|Q4S447_TETNG Chromosome 20 SCAF14744, whole genome sho... 47 5e-04
tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04
tr|Q2KML0|Q2KML0_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04
tr|Q2KMK9|Q2KMK9_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04
tr|Q2KMK7|Q2KMK7_RAT Chromodomain helicase DNA-binding protein 3... 47 6e-04
tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein... 47 6e-04
tr|B1AR16|B1AR16_MOUSE Chromodomain helicase DNA binding protein... 47 6e-04
tr|Q2TAZ1|Q2TAZ1_HUMAN CHD3 protein (Fragment) OS=Homo sapiens G... 47 6e-04
tr|B4DLC6|B4DLC6_HUMAN cDNA FLJ59330, highly similar to Chromodo... 47 6e-04
tr|B3KWV4|B3KWV4_HUMAN cDNA FLJ43940 fis, clone TESTI4014175, hi... 47 6e-04
tr|A8Q9I0|A8Q9I0_BRUMA CHD4 protein, putative OS=Brugia malayi G... 45 0.002
tr|B4DKV1|B4DKV1_HUMAN cDNA FLJ58804, highly similar to Chromodo... 45 0.003
tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=c... 44 0.004
tr|Q4SNF1|Q4SNF1_TETNG Chromosome 8 SCAF14543, whole genome shot... 44 0.004
tr|Q4QRH1|Q4QRH1_DANRE Wu:fd12d03 protein (Fragment) OS=Danio re... 44 0.004
tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate chrom... 44 0.004
tr|O73820|O73820_XENLA Mi-2 (Fragment) OS=Xenopus laevis PE=2 SV=1 44 0.004
tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd... 44 0.004
tr|Q99JM0|Q99JM0_MOUSE Chd4 protein (Fragment) OS=Mus musculus G... 44 0.004

>tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032704001
PE=4 SV=1
Length = 891

Score = 152 bits (385), Expect = 8e-36
Identities = 76/145 (52%), Positives = 97/145 (66%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K +T EEI YGTLFL HI+EDI+DSP FSDGVPKEGLRI DVLVR+A+L L++
Sbjct: 415 PRLKQKTFEEIKDYGTLFLAHISEDITDSPTFSDGVPKEGLRIPDVLVRIAVLLLVRDKV 474

Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170
LF DD+ R PGL R WKE D LL+A++KHGYGRWQ I++D + +
Sbjct: 475 KLALEKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKV 534

Query: 169 KSYICKELQLPSSGNVSMLDGSRSP 95
+ IC+E LP N + GS++P
Sbjct: 535 QEVICQEQNLPFI-NFPVPGGSQAP 558


>tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
OS=Physcomitrella patens subsp. patens GN=CHR1504 PE=4
SV=1
Length = 1245

Score = 146 bits (368), Expect = 7e-34
Identities = 88/168 (52%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+KP+T EEI YGTLFL+HIAEDI+DSP FSDGVPKEGLRIQDVLVRLAILHLI+
Sbjct: 1015 PRLKPKTPEEIKDYGTLFLSHIAEDINDSPFFSDGVPKEGLRIQDVLVRLAILHLIRDKV 1074

Query: 349 XXXXXVSKIALFSDDVY-KRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESD 173
I LFS + R L N + WKE D KLL AI HGYGRW I+ED +
Sbjct: 1075 KALSEDPSIPLFSPGSHIYRYYSLRNTKVWKEEHDRKLLYAICSHGYGRWLSIVEDPQLG 1134

Query: 172 LKSYICKELQLPSSGNVS--MLDGSRSPTKVPGQ-EGSSFPKEEAARQ 38
L I EL L +++ +G+ T VP + EG S EA R+
Sbjct: 1135 LGPVIRGELLLRGVNDIAGPSKNGNARSTPVPAEDEGPSGLPAEADRE 1182


>tr|A5BRA6|A5BRA6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043255 PE=4 SV=1
Length = 755

Score = 141 bits (355), Expect = 2e-32
Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 22/167 (13%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K +T EEI YGTLFL HI+EDI+DSP FSDGVPKEGLRI DVLVR+A+L L++
Sbjct: 257 PRLKQKTFEEIKDYGTLFLAHISEDITDSPTFSDGVPKEGLRIPDVLVRIAVLLLVRDKP 316

Query: 349 XXXXXVS---------------KIAL-------FSDDVYKRLPGLVNARFWKEPQDWKLL 236
K+AL F DD+ R PGL R WKE D LL
Sbjct: 317 SSVRETLLSWHGSFVGKKRKKVKLALEKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLL 376

Query: 235 QAILKHGYGRWQEIIEDTESDLKSYICKELQLPSSGNVSMLDGSRSP 95
+A++KHGYGRWQ I++D + ++ IC+E LP N + GS++P
Sbjct: 377 RAVIKHGYGRWQAIVDDKDLKVQEVICQEQNLPFI-NFPVPGGSQAP 422


>tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
OS=Physcomitrella patens subsp. patens GN=CHR1512 PE=4
SV=1
Length = 1220

Score = 135 bits (340), Expect = 1e-30
Identities = 76/132 (57%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+KP+T EEI YGTLFL+HIAEDI+DSP FSDG+PKEGLRIQDVLVRLAILHLI+
Sbjct: 1006 PRLKPKTPEEIKDYGTLFLSHIAEDINDSPFFSDGIPKEGLRIQDVLVRLAILHLIRDKV 1065

Query: 349 XXXXXVSKIALFSDDVYK-RLPGLVNARFWKEPQDWKLLQAIL-KHGYGRWQEIIEDTES 176
+ LFS + R L N + WKE D KLL AI +HGYGRW I+ED +
Sbjct: 1066 KALTEDPAMPLFSQGSHMYRYYSLRNTKVWKEEHDRKLLYAICSRHGYGRWLSIVEDPQL 1125

Query: 175 DLKSYICKELQL 140
L I EL L
Sbjct: 1126 GLGPVIRGELLL 1137


>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza
sativa GN=PKL PE=2 SV=1
Length = 1360

Score = 106 bits (265), Expect = 6e-22
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++
Sbjct: 995 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1053

Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170
LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ +
Sbjct: 1054 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1113

Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59
+EL+LP++ L S S + G QEG S P
Sbjct: 1114 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1152


>tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza
sativa subsp. japonica GN=OSJNBb0036B04.22 PE=4 SV=1
Length = 1354

Score = 106 bits (265), Expect = 6e-22
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++
Sbjct: 989 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1047

Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170
LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ +
Sbjct: 1048 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1107

Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59
+EL+LP++ L S S + G QEG S P
Sbjct: 1108 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1146


>tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os06g0183800 PE=4 SV=1
Length = 1335

Score = 106 bits (265), Expect = 6e-22
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++
Sbjct: 970 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1028

Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170
LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ +
Sbjct: 1029 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1088

Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59
+EL+LP++ L S S + G QEG S P
Sbjct: 1089 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1127


>tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21929 PE=4 SV=1
Length = 1309

Score = 106 bits (265), Expect = 6e-22
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++
Sbjct: 944 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1002

Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170
LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ +
Sbjct: 1003 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1062

Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59
+EL+LP++ L S S + G QEG S P
Sbjct: 1063 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1101


>tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_019537 PE=4 SV=1
Length = 1364

Score = 106 bits (265), Expect = 6e-22
Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Frame = -1

Query: 529 PRMKPQTAEEITRYGTLFLTHIAEDISDSPNFSDGVPKEGLRIQDVLVRLAILHLIQXXX 350
PR+K ++ EEI RY L + H+ EDI+DS ++DGVPKE +R + LVRLA + L++
Sbjct: 999 PRLKGKSVEEIQRYAELVMIHLLEDINDSGYYADGVPKE-MRTDETLVRLANISLVEEKV 1057

Query: 349 XXXXXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDL 170
LF + P LV R WK QD LL+A++KHGY RWQ I +D ++ +
Sbjct: 1058 AAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGI 1117

Query: 169 KSYICKELQLPSSGNVSMLDGSRSPTKVPG-----QEGSSFP 59
+EL+LP++ L S S + G QEG S P
Sbjct: 1118 FEAARQELRLPTANE---LISSHSNNETNGNLESTQEGQSNP 1156


>tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g31900
OS=Arabidopsis thaliana GN=AT4g31900 PE=2 SV=1
Length = 1067

Score = 84.3 bits (207), Expect = 3e-15
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Frame = -1

Query: 493 RYGTLFLTHIAEDISD-SPNF--------SDGVPKEGLRIQDVLVRLAILHLIQXXXXXX 341
RYG LFL HIAE+ +D S NF +DGVPKEG+ ++LV + + L++
Sbjct: 793 RYGILFLKHIAENPTDNSTNFKVITAMVYADGVPKEGISSDELLVSMTFMMLVKEKCQFL 852

Query: 340 XXVSKIALFSDDVYKRLPGLVNARFWKEPQDWKLLQAILKHGYGRWQEIIEDTESDLKSY 161
+FS+ V + L N F KE D L+ A+ KHGYGRW I+ED E +
Sbjct: 853 DNHPTAPVFSNYVISKY-NLRNGAFSKEEHDRILIPAVSKHGYGRWVAIVEDEEIGFQEV 911

Query: 160 ICKELQLP 137
CK+L +P
Sbjct: 912 ACKDLNIP 919