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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918648
Clone id YMU001_000115_H06
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAGGTCTGTACTCTTTACGTAAGTGTAGCATGGTTACATGACTTACCTCCCTAGGAAGCC
AAGCTACAAAAGAAAGAGAGGCAAGAAGATGAATCTGATGCCCCTCTCAATCCTTGACTT
GCTCAAGCCATTATGTGTGTGATGAAGCAAGCCCTTCCTCTTACTAGAGATTCTTGCTCT
CAAGAAATAGCATGGCCATGGTAGAACTCAATACATTATAGATCTAGGGAGGATGATCAC
TTCAAACCTCCTCTGAATGTTATCTACACAAAAAATGAAGCCCTTAGATACTTCATGGCT
GACAGCCCTCTCTATATGATACAAGACTGGCATAATATACACTCAAGCTTTTTACAAATT
AATCATCGACATGCTGGATTTCTCCCATCAAAATTCTGTTACTTGCCACACTAAAGCCCA
GTAGAGATGGATTAACTACTTTCTTGCCCTTCTTCGCCTTCTTCTTCGCACTCTTTAATG
CAGAATTTTGTCCAGAATTCTCTGAGTCTGGCTCATCCTCCC
■■Homology search results ■■ -
sp_hit_id Q6Y7W8
Definition sp|Q6Y7W8|PERQ2_MOUSE PERQ amino acid-rich with GYF domain-containing protein 2 OS=Mus musculus
Align length 26
Score (bit) 31.2
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918648|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_H06.
         (522 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6Y7W8|PERQ2_MOUSE PERQ amino acid-rich with GYF domain-conta...    31   3.1  
sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-conta...    31   3.1  
sp|Q4KME6|PERQ2_DANRE PERQ amino acid-rich with GYF domain-conta...    31   4.0  

>sp|Q6Y7W8|PERQ2_MOUSE PERQ amino acid-rich with GYF domain-containing
            protein 2 OS=Mus musculus GN=Gigyf2 PE=1 SV=2
          Length = 1291

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = -3

Query: 433  NPSLLGFSV--ASNRILMGEIQHVDD 362
            +PSLLGFSV  +S R+ MGEI+ +DD
Sbjct: 1265 DPSLLGFSVNASSERLNMGEIETLDD 1290


>sp|Q6Y7W6|PERQ2_HUMAN PERQ amino acid-rich with GYF domain-containing
            protein 2 OS=Homo sapiens GN=GIGYF2 PE=1 SV=1
          Length = 1299

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = -3

Query: 433  NPSLLGFSV--ASNRILMGEIQHVDD 362
            +PSLLGFSV  +S R+ MGEI+ +DD
Sbjct: 1273 DPSLLGFSVNASSERLNMGEIETLDD 1298


>sp|Q4KME6|PERQ2_DANRE PERQ amino acid-rich with GYF domain-containing
            protein 2 OS=Danio rerio GN=gigyf2 PE=2 SV=1
          Length = 1335

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = -3

Query: 433  NPSLLGFSV--ASNRILMGEIQHVDD 362
            +PSLLGFSV  +S R+ MGEI+ V+D
Sbjct: 1309 DPSLLGFSVNASSERLNMGEIETVED 1334
tr_hit_id A9T0H0
Definition tr|A9T0H0|A9T0H0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 26
Score (bit) 47.8
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918648|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_H06.
         (522 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T0H0|A9T0H0_PHYPA Predicted protein OS=Physcomitrella paten...    48   3e-04
tr|A9TLU9|A9TLU9_PHYPA Predicted protein OS=Physcomitrella paten...    47   4e-04
tr|A7NTD9|A7NTD9_VITVI Chromosome chr18 scaffold_1, whole genome...    40   0.069
tr|Q9FZJ2|Q9FZJ2_ARATH F17L21.22 OS=Arabidopsis thaliana PE=4 SV=1     40   0.090
tr|Q5JJP6|Q5JJP6_ORYSJ Adenylyl cyclase-like OS=Oryza sativa sub...    40   0.090
tr|Q0JGG6|Q0JGG6_ORYSJ Os01g0924600 protein (Fragment) OS=Oryza ...    40   0.090
tr|A3A130|A3A130_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.090
tr|A2WYJ1|A2WYJ1_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.090
tr|Q6ZE11|Q6ZE11_ORYSJ Putative uncharacterized protein P0495H05...    38   0.34 
tr|B8B742|B8B742_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.34 
tr|A3BGE7|A3BGE7_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.34 
tr|A7QUU4|A7QUU4_VITVI Chromosome chr1 scaffold_180, whole genom...    37   0.77 
tr|A5APT2|A5APT2_VITVI Putative uncharacterized protein OS=Vitis...    37   0.77 
tr|Q9FMM3|Q9FMM3_ARATH Gb|AAC80623.1 OS=Arabidopsis thaliana GN=...    36   1.00 
tr|B8A1I5|B8A1I5_MAIZE Putative uncharacterized protein OS=Zea m...    35   2.2  
tr|B6T096|B6T096_MAIZE Putative uncharacterized protein OS=Zea m...    35   2.2  
tr|A8MCX2|A8MCX2_CALMQ Aminotransferase class V OS=Caldivirga ma...    35   2.3  
tr|Q0WLZ7|Q0WLZ7_ARATH Putative uncharacterized protein At1g2430...    33   6.5  
tr|O48697|O48697_ARATH F3I6.24 protein OS=Arabidopsis thaliana G...    33   6.5  

>tr|A9T0H0|A9T0H0_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_167456 PE=4 SV=1
          Length = 2371

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = -3

Query: 439  VVNPSLLGFSVASNRILMGEIQHVDD 362
            VV+PSLLGFSV SNRI+MGEI H+DD
Sbjct: 2346 VVDPSLLGFSVTSNRIMMGEIHHIDD 2371


>tr|A9TLU9|A9TLU9_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_170788 PE=4 SV=1
          Length = 2374

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = -3

Query: 439  VVNPSLLGFSVASNRILMGEIQHVDD 362
            +V+PSLLGFSV SNRI+MGEI H+DD
Sbjct: 2349 IVDPSLLGFSVTSNRIMMGEIHHIDD 2374


>tr|A7NTD9|A7NTD9_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014630001
           PE=4 SV=1
          Length = 794

 Score = 40.0 bits (92), Expect = 0.069
 Identities = 17/25 (68%), Positives = 23/25 (92%)
 Frame = -3

Query: 436 VNPSLLGFSVASNRILMGEIQHVDD 362
           V+P++LGF+V SNRI+MGEIQ V+D
Sbjct: 770 VSPAVLGFNVVSNRIMMGEIQSVED 794


>tr|Q9FZJ2|Q9FZJ2_ARATH F17L21.22 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1475

 Score = 39.7 bits (91), Expect = 0.090
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 436  VNPSLLGFSVASNRILMGEIQHVDD 362
            ++P+LLGF V SNRILMGEI   DD
Sbjct: 1450 IDPALLGFKVTSNRILMGEIHRADD 1474


>tr|Q5JJP6|Q5JJP6_ORYSJ Adenylyl cyclase-like OS=Oryza sativa subsp.
           japonica GN=P0592G05.34 PE=4 SV=1
          Length = 836

 Score = 39.7 bits (91), Expect = 0.090
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -3

Query: 436 VNPSLLGFSVASNRILMGEIQHVDD 362
           ++PSLLGF V SNRI+MGEI  +DD
Sbjct: 812 IDPSLLGFKVHSNRIMMGEIHRLDD 836


>tr|Q0JGG6|Q0JGG6_ORYSJ Os01g0924600 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0924600 PE=4 SV=1
          Length = 456

 Score = 39.7 bits (91), Expect = 0.090
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -3

Query: 436 VNPSLLGFSVASNRILMGEIQHVDD 362
           ++PSLLGF V SNRI+MGEI  +DD
Sbjct: 432 IDPSLLGFKVHSNRIMMGEIHRLDD 456


>tr|A3A130|A3A130_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_004502 PE=4 SV=1
          Length = 1530

 Score = 39.7 bits (91), Expect = 0.090
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -3

Query: 436  VNPSLLGFSVASNRILMGEIQHVDD 362
            ++PSLLGF V SNRI+MGEI  +DD
Sbjct: 1506 IDPSLLGFKVHSNRIMMGEIHRLDD 1530


>tr|A2WYJ1|A2WYJ1_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_04992 PE=4 SV=1
          Length = 1539

 Score = 39.7 bits (91), Expect = 0.090
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -3

Query: 436  VNPSLLGFSVASNRILMGEIQHVDD 362
            ++PSLLGF V SNRI+MGEI  +DD
Sbjct: 1515 IDPSLLGFKVHSNRIMMGEIHRLDD 1539


>tr|Q6ZE11|Q6ZE11_ORYSJ Putative uncharacterized protein P0495H05.38
            OS=Oryza sativa subsp. japonica GN=P0495H05.38 PE=4 SV=1
          Length = 1739

 Score = 37.7 bits (86), Expect = 0.34
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = -3

Query: 436  VNPSLLGFSVASNRILMGEIQHVDD 362
            V+ ++LGF+V SNRI+MGEIQ+V+D
Sbjct: 1715 VSAAVLGFNVVSNRIMMGEIQNVED 1739


>tr|B8B742|B8B742_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_24825 PE=4 SV=1
          Length = 1739

 Score = 37.7 bits (86), Expect = 0.34
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = -3

Query: 436  VNPSLLGFSVASNRILMGEIQHVDD 362
            V+ ++LGF+V SNRI+MGEIQ+V+D
Sbjct: 1715 VSAAVLGFNVVSNRIMMGEIQNVED 1739