BP918649 |
Clone id |
YMU001_000115_H08 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000115_H08. |
Accession |
BP918649 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAGATAATGCAGTAGACAAGACACACAAGACATACGGAGTAGCGGAGTTCAACTCCCAAA AGCATTGACCCCTCAACTAGGCGTCCCTTGCAGTATTTCTTTATTACATTAGACCGAAGT AAAAGTTGTAACTCGGAGAGCCACGCTCTTCCTCTATGGCATTCATAGGGTCGCAGTTTA CTGGGCCAATCTATGCTGTCATCCAATCCTTGGCCTCTCTTTTATAGGCAGGGTCCAAAA CAATCCCCAAATATGACTTAAAAATCTCAGTGAATTTTACAAGTGCCAAAAGCACCAAAG TCAATTCTTAACAAAAGCTAGTGCTCAAGAGCATTGAAGCCAACACTTACCCATACCTGG CGACCAAAAAAAGCTCTCCAGTGTTCCAAATGCCACGTCACCTGTCGTGCTGCCATGCCA GCACATGTAATTTGTGGCGCGATCTGTAGGCTGCTGTGCTTAGAGACGGGTCTGATAGTT CGGGTCCTACGCTACTCAACTCTTCCTCCTATCTCCAGGTCAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q62868 |
Definition |
sp|Q62868|ROCK2_RAT Rho-associated protein kinase 2 OS=Rattus norvegicus |
Align length |
28 |
Score (bit) |
35.4 |
E-value |
0.17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9MFX8 |
Definition |
tr|Q9MFX8|Q9MFX8_9ECHO Cytochrome oxidase I (Fragment) OS=Echinometra lucunter |
Align length |
58 |
Score (bit) |
37.4 |
E-value |
0.47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918649|Adiantum capillus-veneris mRNA, clone: YMU001_000115_H08. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9MFX8|Q9MFX8_9ECHO Cytochrome oxidase I (Fragment) OS=Echino... 37 0.47 tr|Q9MFX7|Q9MFX7_9ECHO Cytochrome oxidase I (Fragment) OS=Echino... 37 0.47 tr|Q9MFX5|Q9MFX5_9ECHO Cytochrome oxidase I (Fragment) OS=Echino... 37 0.47 tr|Q9MFX6|Q9MFX6_9ECHO Cytochrome oxidase I (Fragment) OS=Echino... 37 0.80 tr|Q9MFX9|Q9MFX9_9ECHO Cytochrome oxidase I (Fragment) OS=Echino... 36 1.4 tr|B8PJS6|B8PJS6_9APHY Predicted protein (Fragment) OS=Postia pl... 34 3.9 tr|O73732|O73732_XENLA Rho-associated kinase alpha OS=Xenopus la... 33 6.7 tr|B7ZRE4|B7ZRE4_XENLA Putative uncharacterized protein OS=Xenop... 33 6.7 tr|Q8CC95|Q8CC95_MOUSE Putative uncharacterized protein (Fragmen... 33 6.7 tr|Q6A035|Q6A035_MOUSE MKIAA0619 protein (Fragment) OS=Mus muscu... 33 6.7 tr|Q3UEZ9|Q3UEZ9_MOUSE Putative uncharacterized protein (Fragmen... 33 6.7 tr|A5XDA7|A5XDA7_MOUSE ROCK2 splice variant (Fragment) OS=Mus mu... 33 6.7 tr|Q53SJ7|Q53SJ7_HUMAN Putative uncharacterized protein ROCK2 (F... 33 6.7 tr|Q14DU5|Q14DU5_HUMAN ROCK2 protein OS=Homo sapiens GN=ROCK2 PE... 33 6.7 tr|B4DRJ9|B4DRJ9_HUMAN cDNA FLJ51533, highly similar to Rho-asso... 33 6.7 tr|Q3TBE0|Q3TBE0_MOUSE Putative uncharacterized protein OS=Mus m... 33 8.8 tr|Q2KHM4|Q2KHM4_HUMAN Rho-associated, coiled-coil containing pr... 33 8.8 tr|B0YJ91|B0YJ91_HUMAN Rho-associated protein kinase 1 OS=Homo s... 33 8.8
>tr|Q9MFX8|Q9MFX8_9ECHO Cytochrome oxidase I (Fragment) OS=Echinometra lucunter GN=COI PE=4 SV=1 Length = 199
Score = 37.4 bits (85), Expect = 0.47 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +1
Query: 349 THTWRPKKALQ--CSKCHVTCRAAMPAHVICGAICRLLCLETGLIVRVLRYSTLPPIS 516 TH+ RP + L C+ H+ C +P I G+ R C LI +LR PP+S Sbjct: 121 THSNRPSQLLYWCCAAWHLLCSCPLPLRTINGSRLRYFCRVYTLIPSILRIQPTPPLS 178
>tr|Q9MFX7|Q9MFX7_9ECHO Cytochrome oxidase I (Fragment) OS=Echinometra lucunter GN=COI PE=4 SV=1 Length = 195
Score = 37.4 bits (85), Expect = 0.47 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +1
Query: 349 THTWRPKKALQ--CSKCHVTCRAAMPAHVICGAICRLLCLETGLIVRVLRYSTLPPIS 516 TH+ RP + L C+ H+ C +P I G+ R C LI +LR PP+S Sbjct: 117 THSNRPSQLLYWCCAAWHLLCSCPLPLRTINGSRLRYFCRVYTLIPSILRIQPTPPLS 174
>tr|Q9MFX5|Q9MFX5_9ECHO Cytochrome oxidase I (Fragment) OS=Echinometra lucunter GN=COI PE=4 SV=1 Length = 191
Score = 37.4 bits (85), Expect = 0.47 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +1
Query: 349 THTWRPKKALQ--CSKCHVTCRAAMPAHVICGAICRLLCLETGLIVRVLRYSTLPPIS 516 TH+ RP + L C+ H+ C +P I G+ R C LI +LR PP+S Sbjct: 114 THSNRPSQLLYWCCAAWHLLCSCPLPLRTINGSRLRYFCRVYTLIPSILRIQPTPPLS 171
>tr|Q9MFX6|Q9MFX6_9ECHO Cytochrome oxidase I (Fragment) OS=Echinometra lucunter GN=COI PE=4 SV=1 Length = 193
Score = 36.6 bits (83), Expect = 0.80 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +1
Query: 349 THTWRPKKALQ--CSKCHVTCRAAMPAHVICGAICRLLCLETGLIVRVLRYSTLPPIS 516 TH+ RP + L C+ H+ C +P I G+ R C LI +LR PP+S Sbjct: 115 THSNRPSQLLYWCCAAWHLLCSCPLPLRTINGSRLRHFCRVYTLIPSILRIQPTPPLS 172
>tr|Q9MFX9|Q9MFX9_9ECHO Cytochrome oxidase I (Fragment) OS=Echinometra lucunter GN=COI PE=4 SV=1 Length = 194
Score = 35.8 bits (81), Expect = 1.4 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1
Query: 349 THTWRPKKALQ--CSKCHVTCRAAMPAHVICGAICRLLCLETGLIVRVLRYSTLPPIS 516 TH+ RP + L C+ H C +P I G+ R C LI +LR PP+S Sbjct: 117 THSNRPSQLLYWCCAAWHXLCSCPLPLRTINGSRLRHFCRVYTLIPSILRIQPTPPLS 174
>tr|B8PJS6|B8PJS6_9APHY Predicted protein (Fragment) OS=Postia placenta Mad-698-R GN=POSPLDRAFT_93703 PE=4 SV=1 Length = 301
Score = 34.3 bits (77), Expect = 3.9 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -2
Query: 212 QGLDDSIDWPSKLRPYECHRGRAWLSELQLLLRSNVIKKYCKGRLVEGSM 63 +GLDD IDW S R AWL+ +QL S + + + ++VEGS+ Sbjct: 234 EGLDDFIDWNSL-------RQGAWLTTVQLKFDSTEVSEESEKKIVEGSV 276
>tr|O73732|O73732_XENLA Rho-associated kinase alpha OS=Xenopus laevis GN=rock2 PE=2 SV=1 Length = 1370
Score = 33.5 bits (75), Expect = 6.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1
Query: 322 CSRALKPTLTHTWRPKKALQCSKCHVTC 405 C +KP L H ++P AL+C +CH+ C Sbjct: 1256 CDACMKP-LWHMFKPPAALECRRCHIKC 1282
>tr|B7ZRE4|B7ZRE4_XENLA Putative uncharacterized protein OS=Xenopus laevis PE=2 SV=1 Length = 1372
Score = 33.5 bits (75), Expect = 6.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1
Query: 322 CSRALKPTLTHTWRPKKALQCSKCHVTC 405 C +KP L H ++P AL+C +CH+ C Sbjct: 1258 CDACMKP-LWHMFKPPAALECRRCHIKC 1284
>tr|Q8CC95|Q8CC95_MOUSE Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Rock2 PE=2 SV=1 Length = 432
Score = 33.5 bits (75), Expect = 6.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1
Query: 322 CSRALKPTLTHTWRPKKALQCSKCHVTC 405 C +KP L H ++P AL+C +CH+ C Sbjct: 318 CEACMKP-LWHMFKPPPALECRRCHIKC 344
>tr|Q6A035|Q6A035_MOUSE MKIAA0619 protein (Fragment) OS=Mus musculus GN=Rock2 PE=2 SV=1 Length = 777
Score = 33.5 bits (75), Expect = 6.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1
Query: 322 CSRALKPTLTHTWRPKKALQCSKCHVTC 405 C +KP L H ++P AL+C +CH+ C Sbjct: 663 CEACMKP-LWHMFKPPPALECRRCHIKC 689
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