BP918654 |
Clone id |
YMU001_000116_A05 |
Library |
YMU01 |
Length |
577 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_A05. |
Accession |
BP918654 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTAGCCATACCATGTTCATGGCACGCTCAAGCATCGAGTTTGCCCAATTTGAATCCCAAG TCAACTGCTCTTTTGAGTTTGGATTTGATGCGGGATCAAAACCATGGGTTTCGATATTTG CCTCATCAATAACATACAGGCCAAATAAATCACAAAGTTCATACCACCTTGGATGTTGTG GATAGTGACTGTTTCTAACAGCGTTTATATTGTTCTTTTTCATAAGCACGATGTCCGTGA TCATACAGGCCTCAACATTTGTTTTGCCTAGGCGTGGATGATGTTCATGTCGATTCACCC CTGTTATTATTATGGGTTTTTTATTCAGAAGTAGCTCCTTGAAGCCAAGAGCAACGGTTC GAATGCCTACTTGACAAGCCTCTACATCAATGCATTCATTTGAAGCATCCTTTAGAAGAA TGACGAGGGTGTACAAGTTTGGCTGTTCTGCAGACCAAAGCCTGGGATGTGATATCTTTC CTTGAATTACTTTTCTGGTCAATGGGCCAATAGTAAGCTGTGCACTATCCTCACATGACA GTCTTGTTGTCTCCACCATAACTCCATCCTTTGACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P00722 |
Definition |
sp|P00722|BGAL_ECOLI Beta-galactosidase OS=Escherichia coli (strain K12) |
Align length |
167 |
Score (bit) |
171.0 |
E-value |
2.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SWU6 |
Definition |
tr|A9SWU6|A9SWU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
174 |
Score (bit) |
237.0 |
E-value |
4.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918654|Adiantum capillus-veneris mRNA, clone: YMU001_000116_A05. (577 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SWU6|A9SWU6_PHYPA Predicted protein OS=Physcomitrella paten... 237 4e-61 tr|Q5JKZ9|Q5JKZ9_ORYSJ Putative beta-galactosidase (Os01g0952600... 233 7e-60 tr|A3A1K9|A3A1K9_ORYSJ Putative uncharacterized protein OS=Oryza... 230 5e-59 tr|A7Q5F7|A7Q5F7_VITVI Chromosome undetermined scaffold_53, whol... 226 7e-58 tr|B8A982|B8A982_ORYSI Putative uncharacterized protein OS=Oryza... 218 2e-55 tr|Q9M1I3|Q9M1I3_ARATH Beta Galactosidase-like protein OS=Arabid... 216 6e-55 tr|Q8RWQ2|Q8RWQ2_ARATH At3g54435 OS=Arabidopsis thaliana GN=At3g... 216 6e-55 tr|Q2V3P5|Q2V3P5_ARATH Uncharacterized protein At3g54440.2 OS=Ar... 216 6e-55 tr|Q0WVI3|Q0WVI3_ARATH Beta Galactosidase-like protein OS=Arabid... 216 6e-55 tr|A9MQ82|A9MQ82_SALAR Putative uncharacterized protein OS=Salmo... 172 1e-41 tr|Q5ETW3|Q5ETW3_9ENTR LacZ (Fragment) OS=Salmonella sp. CDC 156... 172 1e-41 tr|A4RT31|A4RT31_OSTLU Beta-galactosidase, putative OS=Ostreococ... 172 2e-41 tr|B1J0T5|B1J0T5_ECOLC Glycoside hydrolase family 2 TIM barrel O... 171 2e-41 tr|Q8VNN2|Q8VNN2_ECOLX LacZ protein OS=Escherichia coli GN=lacZ ... 171 2e-41 tr|Q8L1L8|Q8L1L8_ECOLX Beta-D-galactosidase (Fragment) OS=Escher... 171 2e-41 tr|B8LFD6|B8LFD6_ECOLI Beta-galactosidase OS=Escherichia coli (s... 171 2e-41 tr|B2NAF2|B2NAF2_ECOLX Beta-galactosidase OS=Escherichia coli 53... 171 2e-41 tr|A7ZWZ1|A7ZWZ1_ECOHS Beta-galactosidase OS=Escherichia coli O9... 171 3e-41 tr|A7ZI91|A7ZI91_ECO24 Beta-galactosidase OS=Escherichia coli O1... 171 3e-41 tr|B7L500|B7L500_ECOLX Beta-D-galactosidase OS=Escherichia coli ... 171 3e-41 tr|B1EKX4|B1EKX4_9ESCH Beta-galactosidase (Lactase) OS=Escherich... 171 3e-41 tr|Q8FKG6|Q8FKG6_ECOL6 Beta-galactosidase OS=Escherichia coli O6... 171 3e-41 tr|Q1RFJ2|Q1RFJ2_ECOUT Beta-galactosidase OS=Escherichia coli (s... 171 3e-41 tr|Q0TKT1|Q0TKT1_ECOL5 Beta-galactosidase OS=Escherichia coli O6... 171 3e-41 tr|B6HZX0|B6HZX0_ECOSE Beta-D-galactosidase LacZ OS=Escherichia ... 171 3e-41 tr|B1LIM9|B1LIM9_ECOSM Beta-galactosidase OS=Escherichia coli (s... 171 3e-41 tr|A1A831|A1A831_ECOK1 Beta-galactosidase OS=Escherichia coli O1... 171 3e-41 tr|Q5ETX3|Q5ETX3_ESCVU LacZ (Fragment) OS=Escherichia vulneris G... 171 3e-41 tr|B8JQM3|B8JQM3_ECOLX Beta-galactosidase OS=Escherichia coli GN... 171 3e-41 tr|B7N8Q1|B7N8Q1_ECOLX Beta-D-galactosidase OS=Escherichia coli ... 171 3e-41
>tr|A9SWU6|A9SWU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_136592 PE=4 SV=1 Length = 1105
Score = 237 bits (604), Expect = 4e-61 Identities = 111/174 (63%), Positives = 135/174 (77%) Frame = -1
Query: 529 DSAQLTIGPLTRKVIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVA 350 DSA IG ++ K+ P+LWSAE PNLYTLV+LLKD S ID EAC+VG+R ++ Sbjct: 324 DSAM--IGCHAHTILTAKLQGPKLWSAEHPNLYTLVVLLKDPSGAVIDCEACRVGVRKIS 381
Query: 349 LGFKELLLNKKPIIITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHP 170 KELL+N +P++I GVNRHEHHPRLGKTN+EACMI DI LMK++NINAVRNSHYP H Sbjct: 382 TRPKELLVNGEPVVIRGVNRHEHHPRLGKTNIEACMIKDITLMKQHNINAVRNSHYPMHS 441
Query: 169 RWYELCDLFGLYVIDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 RWYELCDLFGLY++DEAN+ETHGFDP + QLT+D WAN+ L+R +NMV Sbjct: 442 RWYELCDLFGLYMVDEANLETHGFDPEPWAWPERQLTFDPKWANAFLQRMINMV 495
>tr|Q5JKZ9|Q5JKZ9_ORYSJ Putative beta-galactosidase (Os01g0952600 protein) OS=Oryza sativa subsp. japonica GN=P0431G06.11 PE=4 SV=1 Length = 1117
Score = 233 bits (593), Expect = 7e-60 Identities = 111/192 (57%), Positives = 146/192 (76%), Gaps = 9/192 (4%) Frame = -1
Query: 556 VETTRLSCEDSAQLTIGPLTRK---------VIQGKISHPRLWSAEQPNLYTLVILLKDA 404 V T+ +S A L + P +R V+ GK+ +P+LWS+E PNLYTLV++LKD+ Sbjct: 316 VLTSDMSAASVANLKLKPASRPKHCYGFHGYVLGGKVENPKLWSSEHPNLYTLVVVLKDS 375
Query: 403 SNECIDVEACQVGIRTVALGFKELLLNKKPIIITGVNRHEHHPRLGKTNVEACMITDIVL 224 + + I+ E+CQVGIR V L K++L+N P++I GVNRHEHHPR+GKTN+EACMI D+VL Sbjct: 376 NGKLIECESCQVGIRNVVLAHKQMLVNGCPVVIRGVNRHEHHPRVGKTNLEACMIKDLVL 435
Query: 223 MKKNNINAVRNSHYPQHPRWYELCDLFGLYVIDEANIETHGFDPASNPNSKEQLTWDSNW 44 M++NNINAVRNSHYPQHPRWYELCD+FGLYVIDEANIETHGFD +S+ + T + W Sbjct: 436 MRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETHGFDESSH---FKHPTLEPFW 492
Query: 43 ANSMLERAMNMV 8 A++ML+R + MV Sbjct: 493 ASAMLDRVVGMV 504
>tr|A3A1K9|A3A1K9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004681 PE=4 SV=1 Length = 1076
Score = 230 bits (586), Expect = 5e-59 Identities = 109/192 (56%), Positives = 145/192 (75%), Gaps = 9/192 (4%) Frame = -1
Query: 556 VETTRLSCEDSAQLTIGPLTRK---------VIQGKISHPRLWSAEQPNLYTLVILLKDA 404 V T+ +S A L + P +R V+ GK+ +P+LWS+E PNLYTLV++LKD+ Sbjct: 306 VLTSDMSAASVANLKLKPASRPKHCYGFHGYVLGGKVENPKLWSSEHPNLYTLVVVLKDS 365
Query: 403 SNECIDVEACQVGIRTVALGFKELLLNKKPIIITGVNRHEHHPRLGKTNVEACMITDIVL 224 + + I+ E+CQVGIR V L K++L+N P++I GVNRHEHHPR+GKTN+EACMI D+VL Sbjct: 366 NGKLIECESCQVGIRNVVLAHKQMLVNGCPVVIRGVNRHEHHPRVGKTNLEACMIKDLVL 425
Query: 223 MKKNNINAVRNSHYPQHPRWYELCDLFGLYVIDEANIETHGFDPASNPNSKEQLTWDSNW 44 M++NNINAVRNSHYPQHPRWYELCD+FGLYVIDEANIETHGFD +S+ + T + W Sbjct: 426 MRQNNINAVRNSHYPQHPRWYELCDIFGLYVIDEANIETHGFDESSH---FKHPTLEPFW 482
Query: 43 ANSMLERAMNMV 8 A++ML+R + + Sbjct: 483 ASAMLDRVVGWI 494
>tr|A7Q5F7|A7Q5F7_VITVI Chromosome undetermined scaffold_53, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030923001 PE=4 SV=1 Length = 1008
Score = 226 bits (576), Expect = 7e-58 Identities = 103/161 (63%), Positives = 133/161 (82%) Frame = -1
Query: 490 VIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVALGFKELLLNKKPI 311 V+ GK+ P+LWSAEQP LYTLV++LKD + +D E+CQVGIR V+ K+LL+N P+ Sbjct: 269 VLVGKLESPKLWSAEQPYLYTLVVILKDEFGKVVDCESCQVGIRQVSKAPKQLLVNGHPV 328
Query: 310 IITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHPRWYELCDLFGLYV 131 I+ GVNRHEHHPRLGKTN+E+CM+ D+VLMK+NNINAVRNSHYPQHPRWYELCDLFG+Y+ Sbjct: 329 ILRGVNRHEHHPRLGKTNMESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYM 388
Query: 130 IDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 IDEANIETHGF + + + T +S+WA+SM++R ++MV Sbjct: 389 IDEANIETHGFYDSQHLKNP---TLESSWASSMMDRVISMV 426
>tr|B8A982|B8A982_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05227 PE=4 SV=1 Length = 1032
Score = 218 bits (554), Expect = 2e-55 Identities = 101/167 (60%), Positives = 130/167 (77%), Gaps = 9/167 (5%) Frame = -1
Query: 556 VETTRLSCEDSAQLTIGPLTRK---------VIQGKISHPRLWSAEQPNLYTLVILLKDA 404 V T+ +S A L + P +R V+ GK+ +P+LWS+E PNLYTLV++LKD+ Sbjct: 268 VLTSDMSAASVANLKLKPASRPKHCYGFHGYVLGGKVENPKLWSSEHPNLYTLVVVLKDS 327
Query: 403 SNECIDVEACQVGIRTVALGFKELLLNKKPIIITGVNRHEHHPRLGKTNVEACMITDIVL 224 + + I+ E+CQVGIR V L K++L+N P++I GVNRHEHHPR+GKTN+EACMI D+VL Sbjct: 328 NGKLIECESCQVGIRNVVLAHKQMLVNGCPVVIRGVNRHEHHPRVGKTNLEACMIKDLVL 387
Query: 223 MKKNNINAVRNSHYPQHPRWYELCDLFGLYVIDEANIETHGFDPASN 83 M++NNINAVRNSHYPQH RWYELCD+FGLYVIDEANIE HGFD +S+ Sbjct: 388 MRQNNINAVRNSHYPQHQRWYELCDIFGLYVIDEANIEKHGFDESSH 434
>tr|Q9M1I3|Q9M1I3_ARATH Beta Galactosidase-like protein OS=Arabidopsis thaliana GN=T14E10_10 PE=4 SV=1 Length = 1075
Score = 216 bits (551), Expect = 6e-55 Identities = 97/161 (60%), Positives = 128/161 (79%) Frame = -1
Query: 490 VIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVALGFKELLLNKKPI 311 +++GK+ P LWSAEQPN+Y LV+ LKD S + +D E+ VGIR V+ FK+LL+N P+ Sbjct: 315 LLEGKLDSPNLWSAEQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPV 374
Query: 310 IITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHPRWYELCDLFGLYV 131 +I GVNRHEHHPR+GKTN+EACM+ D+++MK+ NINAVRNSHYPQHPRWYELCDLFG+Y+ Sbjct: 375 VIKGVNRHEHHPRVGKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYM 434
Query: 130 IDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 IDEANIETHGFD + + + + +WA +ML+R + MV Sbjct: 435 IDEANIETHGFDLSGHLKHPAK---EPSWAAAMLDRVVGMV 472
>tr|Q8RWQ2|Q8RWQ2_ARATH At3g54435 OS=Arabidopsis thaliana GN=At3g54440 PE=2 SV=1 Length = 1107
Score = 216 bits (551), Expect = 6e-55 Identities = 97/161 (60%), Positives = 128/161 (79%) Frame = -1
Query: 490 VIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVALGFKELLLNKKPI 311 +++GK+ P LWSAEQPN+Y LV+ LKD S + +D E+ VGIR V+ FK+LL+N P+ Sbjct: 347 LLEGKLDSPNLWSAEQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPV 406
Query: 310 IITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHPRWYELCDLFGLYV 131 +I GVNRHEHHPR+GKTN+EACM+ D+++MK+ NINAVRNSHYPQHPRWYELCDLFG+Y+ Sbjct: 407 VIKGVNRHEHHPRVGKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYM 466
Query: 130 IDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 IDEANIETHGFD + + + + +WA +ML+R + MV Sbjct: 467 IDEANIETHGFDLSGHLKHPAK---EPSWAAAMLDRVVGMV 504
>tr|Q2V3P5|Q2V3P5_ARATH Uncharacterized protein At3g54440.2 OS=Arabidopsis thaliana GN=At3g54440 PE=4 SV=1 Length = 1108
Score = 216 bits (551), Expect = 6e-55 Identities = 97/161 (60%), Positives = 128/161 (79%) Frame = -1
Query: 490 VIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVALGFKELLLNKKPI 311 +++GK+ P LWSAEQPN+Y LV+ LKD S + +D E+ VGIR V+ FK+LL+N P+ Sbjct: 347 LLEGKLDSPNLWSAEQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPV 406
Query: 310 IITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHPRWYELCDLFGLYV 131 +I GVNRHEHHPR+GKTN+EACM+ D+++MK+ NINAVRNSHYPQHPRWYELCDLFG+Y+ Sbjct: 407 VIKGVNRHEHHPRVGKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYM 466
Query: 130 IDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 IDEANIETHGFD + + + + +WA +ML+R + MV Sbjct: 467 IDEANIETHGFDLSGHLKHPAK---EPSWAAAMLDRVVGMV 504
>tr|Q0WVI3|Q0WVI3_ARATH Beta Galactosidase-like protein OS=Arabidopsis thaliana GN=At3g54440 PE=2 SV=1 Length = 631
Score = 216 bits (551), Expect = 6e-55 Identities = 97/161 (60%), Positives = 128/161 (79%) Frame = -1
Query: 490 VIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVALGFKELLLNKKPI 311 +++GK+ P LWSAEQPN+Y LV+ LKD S + +D E+ VGIR V+ FK+LL+N P+ Sbjct: 347 LLEGKLDSPNLWSAEQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPV 406
Query: 310 IITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHPRWYELCDLFGLYV 131 +I GVNRHEHHPR+GKTN+EACM+ D+++MK+ NINAVRNSHYPQHPRWYELCDLFG+Y+ Sbjct: 407 VIKGVNRHEHHPRVGKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYM 466
Query: 130 IDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 IDEANIETHGFD + + + + +WA +ML+R + MV Sbjct: 467 IDEANIETHGFDLSGHLKHPAK---EPSWAAAMLDRVVGMV 504
>tr|A9MQ82|A9MQ82_SALAR Putative uncharacterized protein OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=SARI_02832 PE=4 SV=1 Length = 1027
Score = 172 bits (436), Expect = 1e-41 Identities = 85/163 (52%), Positives = 106/163 (65%) Frame = -1
Query: 496 RKVIQGKISHPRLWSAEQPNLYTLVILLKDASNECIDVEACQVGIRTVALGFKELLLNKK 317 R ++ I+ P LWSAE PNLY VI L+ A E I+ EAC VG R V + LLLN K Sbjct: 291 RATLRLNINRPALWSAETPNLYRAVIQLRTADGELIEAEACDVGFRQVRIDKGLLLLNGK 350
Query: 316 PIIITGVNRHEHHPRLGKTNVEACMITDIVLMKKNNINAVRNSHYPQHPRWYELCDLFGL 137 P++I G NRHEHHP G+ M+ DI+LMK+NN NAVR SHYP HP+WY LCD +GL Sbjct: 351 PLLIRGTNRHEHHPERGQVMDYDTMVQDILLMKQNNFNAVRCSHYPNHPQWYALCDRYGL 410
Query: 136 YVIDEANIETHGFDPASNPNSKEQLTWDSNWANSMLERAMNMV 8 YV+DEANIETHG P + +L+ D +W +M +R MV Sbjct: 411 YVVDEANIETHGMTPMN------RLSDDPDWLPAMSQRVTRMV 447
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