BP918662 |
Clone id |
YMU001_000116_B02 |
Library |
YMU01 |
Length |
557 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_B02. |
Accession |
BP918662 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL282Contig1 |
Sequence |
GCGAAGCGAGGAGTTTCAGTGAAGCCAAGAAAAGGGGATGCACTTCTTTTTTTCAGTCTG TCAACAGAGGCTATCCCGGACCCAAGTAGCCTCCATGGTGGCTGTCCGGTGATTGAAGGG GAGAAATGGTCGGCAACTAAGTGGATACATGTGCAGTCACTTGATTCCCCAGCGCGAGAT GTAGGAGATTGCAAAGACGAGGATGAGAGTTGCGGTGAATGGGCAGCATATGGAGAATGC CAAAAGAATCCAACCTACATGATTGGTACATCAGAGCAGCCGGGTTACTGCAGAAGAAGC TGTAGAGTATGTTAATAGAAGAGAGGGGCTACTGCCACTTGAAGAAATCCAAGGAGTCAG TCCTTTCCTACCAAGGACCATTTGTGACTGTAGGTCTCCTCTCCCATGGTGTAGTATCTT GAGGAGTTTTCCAAATTTTCATCTTACAGATACAAGGCCTGTAGAAAGCTGAGGTTCATT AGTCAATATAATCTGTTGTATTATGGAGCAAAGAAGATATTTTATAACACCAATTGCTAT AAGCAAAGGTAAAGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54001 |
Definition |
sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus |
Align length |
47 |
Score (bit) |
50.1 |
E-value |
7.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8RWK0 |
Definition |
tr|Q8RWK0|Q8RWK0_ARATH Putative uncharacterized protein At5g18900 OS=Arabidopsis thaliana |
Align length |
96 |
Score (bit) |
152.0 |
E-value |
1.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918662|Adiantum capillus-veneris mRNA, clone: YMU001_000116_B02. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8RWK0|Q8RWK0_ARATH Putative uncharacterized protein At5g1890... 152 1e-35 tr|Q8LAN3|Q8LAN3_ARATH Prolyl 4-hydroxylase alpha subunit-like p... 152 1e-35 tr|A9TA62|A9TA62_PHYPA Predicted protein (Fragment) OS=Physcomit... 150 4e-35 tr|A7NWB3|A7NWB3_VITVI Chromosome chr5 scaffold_2, whole genome ... 149 7e-35 tr|B6ZN57|B6ZN57_TOBAC Type 2 proly 4-hydroxylase OS=Nicotiana t... 146 8e-34 tr|A9NS85|A9NS85_PICSI Putative uncharacterized protein OS=Picea... 145 1e-33 tr|A1YAC2|A1YAC2_DIACA Prolyl 4-hydroxylase OS=Dianthus caryophy... 144 2e-33 tr|Q8L8T9|Q8L8T9_ARATH Prolyl 4-hydroxylase alpha subunit-like p... 144 4e-33 tr|Q0WP28|Q0WP28_ARATH Putative uncharacterized protein At3g0630... 144 4e-33 tr|A7PMI3|A7PMI3_VITVI Chromosome chr14 scaffold_21, whole genom... 139 7e-32 tr|Q6AVM9|Q6AVM9_ORYSJ Os05g0489100 protein OS=Oryza sativa subs... 139 1e-31 tr|A2Y5Z3|A2Y5Z3_ORYSI Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|B4FLB6|B4FLB6_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1 137 4e-31 tr|Q9SQT3|Q9SQT3_ARATH F24P17.24 protein OS=Arabidopsis thaliana... 135 1e-30 tr|Q84T04|Q84T04_ORYSJ Os03g0803500 protein OS=Oryza sativa subs... 134 4e-30 tr|B8ALR9|B8ALR9_ORYSI Putative uncharacterized protein OS=Oryza... 134 4e-30 tr|Q5GAV6|Q5GAV6_MAIZE Putative uncharacterized protein OS=Zea m... 132 9e-30 tr|Q9LSI6|Q9LSI6_ARATH Prolyl 4-hydroxylase alpha subunit-like p... 132 2e-29 tr|Q8VZD7|Q8VZD7_ARATH AT3g28480/MFJ20_16 OS=Arabidopsis thalian... 132 2e-29 tr|Q8L970|Q8L970_ARATH Prolyl 4-hydroxylase, putative OS=Arabido... 132 2e-29 tr|Q53CF1|Q53CF1_DIACA Prolyl 4-hydroxylase OS=Dianthus caryophy... 131 2e-29 tr|B8APC3|B8APC3_ORYSI Putative uncharacterized protein OS=Oryza... 130 3e-29 tr|Q338D2|Q338D2_ORYSJ Prolyl 4-hydroxylase, putative, expressed... 130 5e-29 tr|Q109P7|Q109P7_ORYSJ Os10g0413500 protein OS=Oryza sativa subs... 130 5e-29 tr|B8BGT2|B8BGT2_ORYSI Putative uncharacterized protein OS=Oryza... 130 5e-29 tr|A3C4P9|A3C4P9_ORYSJ Putative uncharacterized protein OS=Oryza... 130 5e-29 tr|B6ZN58|B6ZN58_TOBAC Type 2 proly 4-hydroxylase OS=Nicotiana t... 130 6e-29 tr|B6TAV1|B6TAV1_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1 130 6e-29 tr|B4FYU5|B4FYU5_MAIZE Putative uncharacterized protein OS=Zea m... 130 6e-29 tr|Q10RA7|Q10RA7_ORYSJ Prolyl 4-hydroxylase, putative, expressed... 129 8e-29
>tr|Q8RWK0|Q8RWK0_ARATH Putative uncharacterized protein At5g18900 OS=Arabidopsis thaliana GN=At5g18900 PE=2 SV=1 Length = 298
Score = 152 bits (384), Expect = 1e-35 Identities = 68/96 (70%), Positives = 76/96 (79%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AKRG++VKPRKGDALLFF+L +AIPDP SLHGGCPVIEGEKWSATKWIHV S D Sbjct: 195 AKRGIAVKPRKGDALLFFNLHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFDRIVTP 254
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 288 G+C D +ESC WA GEC KNP YM+GT+E PGY Sbjct: 255 SGNCTDMNESCERWAVLGECTKNPEYMVGTTELPGY 290
>tr|Q8LAN3|Q8LAN3_ARATH Prolyl 4-hydroxylase alpha subunit-like protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 298
Score = 152 bits (384), Expect = 1e-35 Identities = 68/96 (70%), Positives = 76/96 (79%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AKRG++VKPRKGDALLFF+L +AIPDP SLHGGCPVIEGEKWSATKWIHV S D Sbjct: 195 AKRGIAVKPRKGDALLFFNLHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFDRIVTP 254
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 288 G+C D +ESC WA GEC KNP YM+GT+E PGY Sbjct: 255 SGNCTDMNESCERWAVLGECTKNPEYMVGTTELPGY 290
>tr|A9TA62|A9TA62_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_16503 PE=4 SV=1 Length = 263
Score = 150 bits (379), Expect = 4e-35 Identities = 68/95 (71%), Positives = 75/95 (78%) Frame = +1
Query: 4 KRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARDV 183 K GV+VKPRKGDALLFFSL A+PD SSLH GCPVIEGEKWSATKWIHV + + P Sbjct: 161 KTGVAVKPRKGDALLFFSLHPSAVPDESSLHTGCPVIEGEKWSATKWIHVAAFEKPRPKN 220
Query: 184 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 288 G C +E +SC EWAAYGECQKNP YM+GT E PGY Sbjct: 221 GACVNEVDSCEEWAAYGECQKNPAYMVGTKEWPGY 255
>tr|A7NWB3|A7NWB3_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019856001 PE=4 SV=1 Length = 298
Score = 149 bits (377), Expect = 7e-35 Identities = 66/95 (69%), Positives = 77/95 (81%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 A++G++VKPRKGDALLFFSL AIPDP SLHGGCPVIEGEKWSATKWIHV S D + Sbjct: 195 ARKGIAVKPRKGDALLFFSLHPTAIPDPMSLHGGCPVIEGEKWSATKWIHVDSFDKILKP 254
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 285 G+C DE++SC WAA GEC KNP YM+G+S+ PG Sbjct: 255 GGNCTDENDSCERWAALGECTKNPEYMLGSSDLPG 289
>tr|B6ZN57|B6ZN57_TOBAC Type 2 proly 4-hydroxylase OS=Nicotiana tabacum GN=NtP4H2.1 PE=2 SV=1 Length = 294
Score = 146 bits (368), Expect = 8e-34 Identities = 64/96 (66%), Positives = 73/96 (76%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AK+G+ VKPRKGDALLF+SL A PDP SLHGGCPVI+GEKWSATKWIHV S D Sbjct: 191 AKKGIPVKPRKGDALLFYSLHPNATPDPLSLHGGCPVIQGEKWSATKWIHVDSFDKTVDT 250
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 288 G+C D DE+C WAA GEC KNP YM+G++ PGY Sbjct: 251 EGNCSDRDENCERWAALGECTKNPEYMLGSAGLPGY 286
>tr|A9NS85|A9NS85_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 208
Score = 145 bits (366), Expect = 1e-33 Identities = 62/95 (65%), Positives = 75/95 (78%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AKRG +VKP++GDALLFFSL+T+A PD SLH GCPVIEGEKWS TKWIHV+S D P + Sbjct: 105 AKRGTAVKPKRGDALLFFSLTTQAKPDTRSLHAGCPVIEGEKWSVTKWIHVESFDKPRQS 164
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 285 +C D++ CGEWAAYGEC NP YM+G+ + PG Sbjct: 165 SDNCVDQNPRCGEWAAYGECNNNPIYMLGSPDLPG 199
>tr|A1YAC2|A1YAC2_DIACA Prolyl 4-hydroxylase OS=Dianthus caryophyllus GN=P4H2 PE=2 SV=1 Length = 297
Score = 144 bits (364), Expect = 2e-33 Identities = 67/96 (69%), Positives = 73/96 (76%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AKRG+SVKPRKGDALLFFSL+ A PD SLHGGCPVIEGEKWSATKWIHV S D D Sbjct: 196 AKRGISVKPRKGDALLFFSLTPTATPDQLSLHGGCPVIEGEKWSATKWIHVDSFDKILED 255
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 288 C D +++C WAA GEC KNP YM+GTS PGY Sbjct: 256 --GCNDHNQNCERWAALGECTKNPEYMVGTSSLPGY 289
>tr|Q8L8T9|Q8L8T9_ARATH Prolyl 4-hydroxylase alpha subunit-like protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 297
Score = 144 bits (362), Expect = 4e-33 Identities = 64/95 (67%), Positives = 74/95 (77%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AK+G++VKP+KG+ALLFF+L +AIPDP SLHGGCPVIEGEKWSATKWIHV S D Sbjct: 194 AKKGIAVKPKKGNALLFFNLQQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSFDKILTH 253
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 285 G+C D +ESC WA GEC KNP YM+GT E PG Sbjct: 254 DGNCTDVNESCERWAVLGECGKNPEYMVGTPEIPG 288
>tr|Q0WP28|Q0WP28_ARATH Putative uncharacterized protein At3g06300 OS=Arabidopsis thaliana GN=At3g06300 PE=2 SV=1 Length = 299
Score = 144 bits (362), Expect = 4e-33 Identities = 64/95 (67%), Positives = 74/95 (77%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPARD 180 AK+G++VKP+KG+ALLFF+L +AIPDP SLHGGCPVIEGEKWSATKWIHV S D Sbjct: 196 AKKGIAVKPKKGNALLFFNLQQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSFDKILTH 255
Query: 181 VGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 285 G+C D +ESC WA GEC KNP YM+GT E PG Sbjct: 256 DGNCTDVNESCERWAVLGECGKNPEYMVGTPEIPG 290
>tr|A7PMI3|A7PMI3_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020832001 PE=4 SV=1 Length = 316
Score = 139 bits (351), Expect = 7e-32 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 2/98 (2%) Frame = +1
Query: 1 AKRGVSVKPRKGDALLFFSLSTEAIPDPSSLHGGCPVIEGEKWSATKWIHVQSLDSPAR- 177 AK+G +V P+KGDALLFFSL +A DPSSLHG CPVI GEKWSATKWIHV+S D P++ Sbjct: 209 AKKGYAVNPKKGDALLFFSLHPDATTDPSSLHGSCPVIAGEKWSATKWIHVRSFDKPSKR 268
Query: 178 -DVGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 288 G+C DEDE C +WAA GEC+KNP YM+G+ G+ Sbjct: 269 GAQGECVDEDEHCPKWAAVGECEKNPVYMVGSENSDGF 306
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