BP918664 |
Clone id |
YMU001_000116_B04 |
Library |
YMU01 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_B04. |
Accession |
BP918664 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2481Contig1 |
Sequence |
AGTGGATCGCGTTGTAGAAGCTGACAAAGGTTGCACATTTCAAGATGGAGAAGATGGAAT GGGTTATGATTCTGATGCAGATATGAGTGAAGATAGTGATATTGGTGAACAAATGGACTT TGAAAGAGATGTAATGGAGGCTGACAAAGAGACTGAGTTTTTAAAATCTTCTGCATCAAA GGCAACAGAAGAGCAGAGGCTTATGTCTGCACAAGCCTCAGGAGATTTCCTCGAGATGCA AGAACCACAGGTTTTGATGATCAGGGAGATGCTATCTGGAAAGCTGGACACTCATTCTTG GATGCTAGGAGAGCTCTTCATGGCCATGGCTGCTATAGTGAAGCTCAAGAGCTTGTTTCA TTCACCAAATGTTGTTGATCCAGTAGCGGGACTTTCCAATCTGCAGTGGACAACAGCAAT GCAGTTGCATGTGGGAGCAGCAAGCAGGATTCTGCAGGAAGTGGTTGAGTTGCCGCAGCT GAAGGGTTCTAGCTGTATGTTACTGTTGCCTGGTGTAATCAAGTACTTGGAATCTATCGG GA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54XM9 |
Definition |
sp|Q54XM9|TAF11_DICDI Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum |
Align length |
49 |
Score (bit) |
34.7 |
E-value |
0.31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T3A5 |
Definition |
tr|A9T3A5|A9T3A5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
176 |
Score (bit) |
46.2 |
E-value |
0.001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918664|Adiantum capillus-veneris mRNA, clone: YMU001_000116_B04. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T3A5|A9T3A5_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|Q91LK1|Q91LK1_WSSV ORF39 (WSSV081) (Wsv025) OS=White spot syn... 38 0.39 tr|Q10QA7|Q10QA7_ORYSJ Os03g0203100 protein OS=Oryza sativa subs... 38 0.39 tr|B8AQE8|B8AQE8_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.39 tr|A3AF81|A3AF81_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.39 tr|A2F1V6|A2F1V6_TRIVA Surface antigen BspA-like OS=Trichomonas ... 37 0.51 tr|Q4RG63|Q4RG63_TETNG Chromosome 2 SCAF15106, whole genome shot... 37 0.67 tr|Q48DF3|Q48DF3_PSE14 Branched-chain amino acid ABC transporter... 37 0.67 tr|Q7RZG9|Q7RZG9_NEUCR Putative uncharacterized protein OS=Neuro... 37 0.67 tr|Q6MFI1|Q6MFI1_NEUCR Putative uncharacterized protein B10H18.2... 37 0.67 tr|Q0T7T8|Q0T7T8_SHIF8 Putative uncharacterized protein OS=Shige... 36 1.1 tr|B3MU29|B3MU29_DROAN GF24044 OS=Drosophila ananassae GN=GF2404... 36 1.1 tr|A4QW98|A4QW98_MAGGR Putative uncharacterized protein OS=Magna... 36 1.1 tr|A2QND4|A2QND4_ASPNC Contig An07c0130, complete genome OS=Aspe... 36 1.5 tr|A1AE29|A1AE29_ECOK1 Putative uncharacterized protein OS=Esche... 35 2.0 tr|Q2LC23|Q2LC23_9ASTR SGT1 protein-like OS=Saussurea involucrat... 35 2.0 tr|Q8WYF8|Q8WYF8_HUMAN Potential LAG1 interactor (Fragment) OS=H... 35 2.0 tr|A5PMP6|A5PMP6_DANRE Novel protein similar to vertebrate compl... 35 2.6 tr|Q87VP7|Q87VP7_PSESM Branched-chain amino acid ABC transporter... 35 2.6 tr|Q4ZN13|Q4ZN13_PSEU2 ABC transporter OS=Pseudomonas syringae p... 35 2.6 tr|Q3KIS5|Q3KIS5_PSEPF ABC transporter-like OS=Pseudomonas fluor... 35 2.6 tr|A7P845|A7P845_VITVI Chromosome chr3 scaffold_8, whole genome ... 35 2.6 tr|B6JYZ4|B6JYZ4_SCHJP V-type ATPase subunit D OS=Schizosaccharo... 35 2.6 tr|Q47G47|Q47G47_DECAR ABC transporter related OS=Dechloromonas ... 35 3.3 tr|B0MLA4|B0MLA4_9FIRM Putative uncharacterized protein OS=Eubac... 35 3.3 tr|Q9M9Z4|Q9M9Z4_ARATH Putative N-arginine dibasic convertase OS... 35 3.3 tr|Q0WNY2|Q0WNY2_ARATH Putative uncharacterized protein At1g0690... 35 3.3 tr|Q0JN30|Q0JN30_ORYSJ Os01g0332900 protein (Fragment) OS=Oryza ... 35 3.3 tr|A2ZSM9|A2ZSM9_ORYSJ Putative uncharacterized protein OS=Oryza... 35 3.3 tr|A2WPE8|A2WPE8_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.3
>tr|A9T3A5|A9T3A5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167816 PE=4 SV=1 Length = 2037
Score = 46.2 bits (108), Expect = 0.001 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 12/176 (6%) Frame = +2
Query: 50 EDGMGYDSDADMSEDSDIG-EQMDFERDVMEADKETEF-----LKSSASKATEEQRLMSA 211 ED D D+ E+ + D E D D++TE + ++A E A Sbjct: 1424 EDKFDEDELRDLQEEESLNVTSSDEEPD----DEDTEAQGVLEVDGHYTEAMSEDLSFQA 1479
Query: 212 QASGDFLEMQEPQVLMIREMLSGKLDTHSWMLGELFMAMAAIVKLKSLFHSP-NVVDPVA 388 + E Q +R L + +GEL+MA+AAIVKL+SLF+SP + Sbjct: 1480 LKTSVMEESPSSQFAFLRSALEESTREKTEFIGELYMAVAAIVKLRSLFYSPFSYTSVTP 1539
Query: 389 GLSNL-----QWTTAMQLHVGAASRILQEVVELPQLKGSSCMLLLPGVIKYLESIG 541 L+N Q ++ + AA R+L V+ + + + L GVI YL S+G Sbjct: 1540 ELTNFISFKEQSPLSLDTLLLAAYRLLLGSVQSIRTQKLAHPGWLVGVINYLGSVG 1595
>tr|Q91LK1|Q91LK1_WSSV ORF39 (WSSV081) (Wsv025) OS=White spot syndrome virus PE=4 SV=1 Length = 231
Score = 37.7 bits (86), Expect = 0.39 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = +2
Query: 41 QDGEDGMGYDSDADMSEDSDIGEQMDFERDVMEADKETEFLKSSASKATEEQRLM 205 ++ E+ YDS++D + DS +GE+ + + D + FL+SS+ +T RL+ Sbjct: 80 EEEEEEEEYDSESDTNVDSLLGEEEEEDSDTESTSADANFLRSSSRNSTTRNRLI 134
>tr|Q10QA7|Q10QA7_ORYSJ Os03g0203100 protein OS=Oryza sativa subsp. japonica GN=Os03g0203100 PE=2 SV=1 Length = 838
Score = 37.7 bits (86), Expect = 0.39 Identities = 27/106 (25%), Positives = 53/106 (50%) Frame = +2
Query: 224 DFLEMQEPQVLMIREMLSGKLDTHSWMLGELFMAMAAIVKLKSLFHSPNVVDPVAGLSNL 403 D ++Q + ++ +LSG+ + ++ L EL+ A AAIVKLK + P+ V + + Sbjct: 303 DLPKVQFVKGFLLENLLSGEGPSIAFTLRELYNASAAIVKLKGILSFPSEV--CRQICSP 360
Query: 404 QWTTAMQLHVGAASRILQEVVELPQLKGSSCMLLLPGVIKYLESIG 541 + V A L ++ ++ +L + G++ YLE++G Sbjct: 361 FQKLPLGPMVATAYIALHKLADMSNWPDMFSLLWIDGILSYLEAVG 406
>tr|B8AQE8|B8AQE8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10430 PE=4 SV=1 Length = 1975
Score = 37.7 bits (86), Expect = 0.39 Identities = 27/106 (25%), Positives = 53/106 (50%) Frame = +2
Query: 224 DFLEMQEPQVLMIREMLSGKLDTHSWMLGELFMAMAAIVKLKSLFHSPNVVDPVAGLSNL 403 D ++Q + ++ +LSG+ + ++ L EL+ A AAIVKLK + P+ V + + Sbjct: 1440 DLPKVQFVKGFLLENLLSGEGPSIAFTLRELYNASAAIVKLKGILSFPSEV--CRQICSP 1497
Query: 404 QWTTAMQLHVGAASRILQEVVELPQLKGSSCMLLLPGVIKYLESIG 541 + V A L ++ ++ +L + G++ YLE++G Sbjct: 1498 FQKLPLGPMVATAYIALHKLADMSNWPDMFSLLWIDGILSYLEAVG 1543
>tr|A3AF81|A3AF81_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009453 PE=4 SV=1 Length = 1713
Score = 37.7 bits (86), Expect = 0.39 Identities = 27/106 (25%), Positives = 53/106 (50%) Frame = +2
Query: 224 DFLEMQEPQVLMIREMLSGKLDTHSWMLGELFMAMAAIVKLKSLFHSPNVVDPVAGLSNL 403 D ++Q + ++ +LSG+ + ++ L EL+ A AAIVKLK + P+ V + + Sbjct: 1260 DLPKVQFVKGFLLENLLSGEGPSIAFTLRELYNASAAIVKLKGILSFPSEV--CRQICSP 1317
Query: 404 QWTTAMQLHVGAASRILQEVVELPQLKGSSCMLLLPGVIKYLESIG 541 + V A L ++ ++ +L + G++ YLE++G Sbjct: 1318 FQKLPLGPMVATAYIALHKLADMSNWPDMFSLLWIDGILSYLEAVG 1363
>tr|A2F1V6|A2F1V6_TRIVA Surface antigen BspA-like OS=Trichomonas vaginalis G3 GN=TVAG_442120 PE=4 SV=1 Length = 548
Score = 37.4 bits (85), Expect = 0.51 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 11/95 (11%) Frame = -3
Query: 426 NCIAV----VHCRLESPATGSTTFGE*NKLLSF-------TIAAMAMKSSPSIQE*VSSF 280 NC+ V ++C +E+ AT S F NKL TI A A S S++ +S Sbjct: 321 NCLLVESIEIYCNIEAIATNS--FANCNKLSKLILPPTISTIGASAFTSCHSLRS-LSIT 377
Query: 279 PDSISLIIKTCGSCISRKSPEACADISLCSSVAFD 175 D++++ K +C S KS ++IS SS AFD Sbjct: 378 SDNLTISDKAFSNCYSLKSISLNSNISTISSKAFD 412
>tr|Q4RG63|Q4RG63_TETNG Chromosome 2 SCAF15106, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00034994001 PE=4 SV=1 Length = 280
Score = 37.0 bits (84), Expect = 0.67 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2
Query: 68 DSDADMSEDSDIGEQMDFERDVMEADKETEFLKSSASKATEEQRLMSAQASG--DFLEMQ 241 D+ A S D D + +E+ ++ K+ E K SKA ++ R+ Q+S LE Q Sbjct: 48 DAAAGSSSDKDTQVKSHYEQLLLRLQKDLESQKDQVSKAQQDLRIQREQSSDAQAELEAQ 107
Query: 242 EPQVLMIREMLSGKLDTHSWMLGEL 316 + QV +++ LS + + GEL Sbjct: 108 KQQVARLQQQLSTQQRKYKDKCGEL 132
>tr|Q48DF3|Q48DF3_PSE14 Branched-chain amino acid ABC transporter, ATP-binding protein OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_4472 PE=3 SV=1 Length = 286
Score = 37.0 bits (84), Expect = 0.67 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%) Frame = +2
Query: 104 GEQMDFERDVMEADKETEFLKSSASKATEEQRLMSAQASGDFLEM-----QEPQVLMIRE 268 GEQ D R+V+E + T + A + Q+ FLE+ Q+PQ+L++ E Sbjct: 162 GEQQDRIREVLETIRLTTSMHRPAGLLSHGQK--------QFLEIGMLLVQDPQLLLLDE 213
Query: 269 MLSGKLDTHSWMLGELFMAMAAIVKLKSLFHSPNVVDPVA 388 ++G D + ELF +A L + H V +A Sbjct: 214 PVAGMTDAETEFTAELFKGLAGKHSLMVVEHDMGFVGSIA 253
>tr|Q7RZG9|Q7RZG9_NEUCR Putative uncharacterized protein OS=Neurospora crassa GN=NCU04047 PE=4 SV=1 Length = 471
Score = 37.0 bits (84), Expect = 0.67 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2
Query: 68 DSDADMSEDSDIGEQMDFERDVMEADKETEFLKSSASKATEEQRLMSAQASGD 226 DS +D S DSD D + D E++ E + +K A KAT+ S +S D Sbjct: 285 DSSSDSSSDSDSSSDSDSDSDSSESEAEKKEVKKEAKKATKSDSSSSDSSSSD 337
>tr|Q6MFI1|Q6MFI1_NEUCR Putative uncharacterized protein B10H18.240 OS=Neurospora crassa GN=B10H18.240 PE=4 SV=1 Length = 412
Score = 37.0 bits (84), Expect = 0.67 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2
Query: 68 DSDADMSEDSDIGEQMDFERDVMEADKETEFLKSSASKATEEQRLMSAQASGD 226 DS +D S DSD D + D E++ E + +K A KAT+ S +S D Sbjct: 226 DSSSDSSSDSDSSSDSDSDSDSSESEAEKKEVKKEAKKATKSDSSSSDSSSSD 278
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