BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918677|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_C05.
         (573 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q87DJ2|CSD_XYLFT Probable cysteine desulfurase OS=Xylella fas...    31   3.9  
sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xen...    31   5.0  
sp|Q089S6|MURI_SHEFN Glutamate racemase OS=Shewanella frigidimar...    30   8.5  
sp|A1RPL0|Y3800_SHESW UPF0061 protein Sputw3181_3800 OS=Shewanel...    30   8.6  
sp|A4YBN4|Y3659_SHEPC UPF0061 protein Sputcn32_3659 OS=Shewanell...    30   8.6  

>sp|Q87DJ2|CSD_XYLFT Probable cysteine desulfurase OS=Xylella
           fastidiosa (strain Temecula1 / ATCC 700964) GN=csd PE=3
           SV=1
          Length = 416

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -1

Query: 474 IHPFGTHAKSLYQATQQPPGTYTTVPLSHTLL--HQTFAVSMI--ERAIRQLQHGD 319
           +H  GT A   Y+AT+    T   VP+   +L    TFA+++I    A+ +L+ GD
Sbjct: 69  VHTLGTEATEAYEATRAALATLLNVPMHELVLCSGTTFAINLIAYSWALPRLRTGD 124


>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia
           OS=Xenopus tropicalis GN=rnf111 PE=2 SV=1
          Length = 954

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -3

Query: 556 MHKGLDTLLAKMHHVATAWLKDESTIGDPPIWHTCK--EPLPSYAAATWHLYHSPPEPH 386
           MH    +L   +HH  ++     S +GD  I H      PLPS AA   H    PP  H
Sbjct: 617 MHAPYTSLTRPLHHQTSSCPHSHSNVGDYVIAHQVPFISPLPSLAAT--HAVPPPPPSH 673


>sp|Q089S6|MURI_SHEFN Glutamate racemase OS=Shewanella frigidimarina
           (strain NCIMB 400) GN=murI PE=3 SV=1
          Length = 259

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 197 RRHVGDLSTSSTVMIDHTLAKLYGAVLNAKVELF 96
           ++H+G L+T  TV  D+T A +     N KVELF
Sbjct: 108 KKHIGLLATPGTVKRDYTQALINQFAGNCKVELF 141


>sp|A1RPL0|Y3800_SHESW UPF0061 protein Sputw3181_3800 OS=Shewanella
           sp. (strain W3-18-1) GN=Sputw3181_3800 PE=3 SV=1
          Length = 484

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 VDPQWCSHP*AMPWLHDASLLIRCQDPYASLSLSL 573
           V PQ  SHP  + W HDA+ LI    P   L L L
Sbjct: 18  VYPQGLSHPQWLAWSHDAAQLIGLTQPTDELLLGL 52


>sp|A4YBN4|Y3659_SHEPC UPF0061 protein Sputcn32_3659 OS=Shewanella
           putrefaciens (strain CN-32 / ATCC BAA-453)
           GN=Sputcn32_3659 PE=3 SV=1
          Length = 484

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 469 VDPQWCSHP*AMPWLHDASLLIRCQDPYASLSLSL 573
           V PQ  SHP  + W HDA+ LI    P   L L L
Sbjct: 18  VYPQGLSHPQWLAWSHDAAQLIGLTQPTDELLLGL 52

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918677|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_C05.
         (573 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8HTE6|B8HTE6_9CHRO Competence protein ComEA helix-hairpin-he...    38   0.46 
tr|A8NML4|A8NML4_COPC7 Predicted protein OS=Coprinopsis cinerea ...    34   5.0  
tr|O57297|O57297_9BETA DR1 OS=Human herpesvirus 7 GN=DR1 PE=4 SV=1     34   6.6  
tr|Q53Q27|Q53Q27_ORYSJ Putative uncharacterized protein OS=Oryza...    33   8.6  
tr|A2ZCU7|A2ZCU7_ORYSI Putative uncharacterized protein OS=Oryza...    33   8.6  

>tr|B8HTE6|B8HTE6_9CHRO Competence protein ComEA helix-hairpin-helix
           repeat protein OS=Cyanothece sp. PCC 7425
           GN=Cyan7425_2007 PE=3 SV=1
          Length = 585

 Score = 37.7 bits (86), Expect = 0.46
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
 Frame = -2

Query: 464 LAHMQRASTKLRSSHLAPIPQSP*ATPYYIRHSLSQ**REPYANCSMETTKV-NNAVDSM 288
           L+ M+R+  K+  S +AP+PQ P     Y+ HS +   REPY N + E   +    VD++
Sbjct: 30  LSQMRRSEFKI--STIAPLPQYP-LIQVYMNHSQASSYREPYRNLTREGDDLEQQMVDAI 86

Query: 287 APFMVTFSIGH*YMNSQPSRRTHRCAHPQGRRHVGDLSTSSTVMIDHTLAKLYGAVLNAK 108
                T  +      +    R  + AH    R   +   +  V++++T   L+G +  A+
Sbjct: 87  QQAKYTIEV------AVQEFRLPKVAHALVERK--EAGVNVRVVLENTYTNLWGNLTPAE 138

Query: 107 VELF 96
           VE F
Sbjct: 139 VERF 142


>tr|A8NML4|A8NML4_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_11591 PE=4
           SV=1
          Length = 160

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 12/76 (15%)
 Frame = -3

Query: 511 ATAWLKDESTIGDPPIWHTCKEPLPSYAAATWHLYHSP------------PEPHPTTSDI 368
           A +W ++      PP W    EP P Y A +W     P            PEP P     
Sbjct: 73  APSWRREPEPQSRPPAWRREPEPEPQYKAPSWRREPEPEPQYKAPSWRREPEPEPQYKAP 132

Query: 367 RCLNDRESHTPTAAWR 320
               D E      +WR
Sbjct: 133 SWRRDPEPQYKAPSWR 148


>tr|O57297|O57297_9BETA DR1 OS=Human herpesvirus 7 GN=DR1 PE=4 SV=1
          Length = 475

 Score = 33.9 bits (76), Expect = 6.6
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = -3

Query: 520 HHVATAWLKDESTIGDP-PIWHTCKEPLPSYAAATWHLYHSPPEPHPTTSDIRCLNDR-E 347
           HH+   W    +T  DP P +   K  L    + T     S  EPHP   D+   +DR +
Sbjct: 69  HHLHRGWPAAHNTCFDPRPYFPNAKVKLLPLGSITLTRSFSSDEPHPIGDDVHHSHDRGD 128

Query: 346 SHTPTAAW 323
            HT   +W
Sbjct: 129 YHTVICSW 136


>tr|Q53Q27|Q53Q27_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=LOC_Os11g12390 PE=4 SV=1
          Length = 130

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 544 LDTLLAKMHHVATAWLKDESTIGDPPIWHTCKEPLPSYAAATWH 413
           LD L   +H V    L DES  G+PPI         SYA + WH
Sbjct: 73  LDDLTESIHRVMEVDLADESASGEPPI---------SYACSAWH 107


>tr|A2ZCU7|A2ZCU7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35612 PE=4 SV=1
          Length = 130

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 544 LDTLLAKMHHVATAWLKDESTIGDPPIWHTCKEPLPSYAAATWH 413
           LD L   +H V    L DES  G+PPI         SYA + WH
Sbjct: 73  LDDLTESIHRVMEVDLADESASGEPPI---------SYACSAWH 107