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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918681
Clone id YMU001_000116_C09
Library
Length 551
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000116_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGGAAGAATTCGCGGTCAGGAAAGAAGGAGATCCCTCTACCACATGGTATACACCATCA
AGTTCAAAGAAAACTGCATGCAATGCAATCTAATGGGCCATACTGGTCCATTCTAAAGTT
CTTCATTAATTTGTCTCTAAGATTCTCTCTATCTCTAAGGTTCAAAAACCAGGACAATCC
CAAGGAGGTCGGACACACGGTAACCTCATTGGTGCTGAGTAGTCGCTACATTCTTCTCCT
TCAACAACGCCTTCCTCGACACCATCTCCCTCCCCATCACCCTCTTCGGTTTCCTCTATC
TCCCTTGCCATCCCGGATTGAGCCTGAAAGCAAAGATGAGATATGGGCAGTAGATGGCCA
GCCAAAGCCTACGCATGACTATGTCACTACTCTCACTTGCTGCCTATGTTCGCTCTCTCA
CCCCCTTCGTTCCCAACTCTGCACCTCCCTAGCTCTCGGCACTTTCCTCCACCTCTAGGC
ACTTTCGGCCTGCGCGTCCATCCTCTCCACTCTTCGCCGTCCCCAAATCTCCGCACTTTC
CTCCACCTCTG
■■Homology search results ■■ -
sp_hit_id P04706
Definition sp|P04706|GLU2_MAIZE Glutelin-2 OS=Zea mays
Align length 46
Score (bit) 30.8
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918681|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_C09.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P04706|GLU2_MAIZE Glutelin-2 OS=Zea mays PE=1 SV=1                  31   4.3  
sp|P13983|EXTN_TOBAC Extensin OS=Nicotiana tabacum GN=HRGPNT3 PE...    25   4.5  
sp|A6H8J1|PRRCA_XENLA Protein PPRC1-A OS=Xenopus laevis GN=prrc1...    26   4.6  
sp|A3LZ57|SEC16_PICST COPII coat assembly protein SEC16 OS=Pichi...    30   9.5  

>sp|P04706|GLU2_MAIZE Glutelin-2 OS=Zea mays PE=1 SV=1
          Length = 223

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 378 HLLPMFALSPPSF--PTLHLPSSRHFPPPLGTFGLRVHPLHSSPSP 509
           HL P   L PP    P +HLP   H PPP+        P+H  P P
Sbjct: 41  HLPPPVHLPPPVHLPPPVHLPPPVHLPPPVHV----PPPVHLPPPP 82


>sp|P13983|EXTN_TOBAC Extensin OS=Nicotiana tabacum GN=HRGPNT3 PE=2
           SV=1
          Length = 620

 Score = 25.4 bits (54), Expect(2) = 4.5
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +3

Query: 387 PMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSSPSP 509
           P ++  PP++     PS  + PPP         P++S P P
Sbjct: 263 PTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPP 303



 Score = 23.9 bits (50), Expect(2) = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 482 PSSPLFAVPKSPHFPPP 532
           PSSP+++ P   + PPP
Sbjct: 341 PSSPIYSPPPPVYSPPP 357


>sp|A6H8J1|PRRCA_XENLA Protein PPRC1-A OS=Xenopus laevis GN=prrc1-A
           PE=2 SV=1
          Length = 442

 Score = 25.8 bits (55), Expect(2) = 4.6
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 473 PARPSSPLFAVPKSPHFPPP 532
           PA  SSPL A    P FPPP
Sbjct: 97  PAAFSSPLPAFSSPPSFPPP 116



 Score = 23.5 bits (49), Expect(2) = 4.6
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 387 PMFALS-PPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSS 500
           P+F+   P S P L       + PPL   G+   P H+S
Sbjct: 57  PIFSTPLPSSVPPLRTSVPLTYAPPLPVTGVHSPPAHTS 95


>sp|A3LZ57|SEC16_PICST COPII coat assembly protein SEC16 OS=Pichia
           stipitis GN=SEC16 PE=3 SV=2
          Length = 2212

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = -3

Query: 527 EESAEIWGRRRVERMDAQAESA*RWRKVPRAREVQS------WERR 408
           ++ A  W  RRVE  +  AES   W + P   E Q+      WE R
Sbjct: 266 KDEALPWEERRVEHPEQAAESTLPWEEQPNVEEFQAHEPALPWEER 311
tr_hit_id A5AEG8
Definition tr|A5AEG8|A5AEG8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 41
Score (bit) 30.4
E-value 0.15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918681|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_C09.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AEG8|A5AEG8_VITVI Putative uncharacterized protein OS=Vitis...    30   0.15 
tr|Q3JIG6|Q3JIG6_BURP1 Putative uncharacterized protein OS=Burkh...    36   1.1  
tr|A2R3Z2|A2R3Z2_ASPNC Similarity to spindle pole body-associate...    35   1.8  
tr|Q03GI4|Q03GI4_PEDPA Predicted permease OS=Pediococcus pentosa...    34   4.2  
tr|Q7S4X1|Q7S4X1_NEUCR Predicted protein OS=Neurospora crassa GN...    34   5.4  
tr|O24099|O24099_MEDTR MtN12 protein (Fragment) OS=Medicago trun...    33   7.0  
tr|A8PSV8|A8PSV8_MALGO Putative uncharacterized protein OS=Malas...    33   7.0  
tr|Q6EUE3|Q6EUE3_ORYSJ Putative uncharacterized protein OJ1705_E...    33   7.2  
tr|Q4WCR7|Q4WCR7_ASPFU GNAT family acetyltransferase, putative O...    33   9.2  
tr|B0YDN0|B0YDN0_ASPFC GNAT family acetyltransferase, putative O...    33   9.2  

>tr|A5AEG8|A5AEG8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_019120 PE=4 SV=1
          Length = 300

 Score = 30.4 bits (67), Expect(2) = 0.15
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 387 PMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSSPSP 509
           P+ A  PPSFPT   P    FPPP         P H+ P P
Sbjct: 107 PIRAPPPPSFPTPAAPPHHSFPPPPPA---AKPPSHAIPPP 144



 Score = 27.7 bits (60), Expect(2) = 0.15
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 482 PSSPLFAVPKSPHFPPP 532
           P +P+   P  PHFPPP
Sbjct: 143 PPAPIIKPPPHPHFPPP 159


>tr|Q3JIG6|Q3JIG6_BURP1 Putative uncharacterized protein
           OS=Burkholderia pseudomallei (strain 1710b)
           GN=BURPS1710b_A1480 PE=4 SV=1
          Length = 911

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 21/43 (48%), Positives = 24/43 (55%)
 Frame = -1

Query: 526 RKVRRFGDGEEWRGWTRRPKVPRGGGKCRELGRCRVGNEGGER 398
           R   R G G   R   RR ++ RGG   REL R RVGNEG +R
Sbjct: 304 RHALRVGHGRGGRLRERRQQLARGGRDRRELLRLRVGNEGRQR 346


>tr|A2R3Z2|A2R3Z2_ASPNC Similarity to spindle pole body-associated
           protein sad1p - Schizosaccharomyces pombe OS=Aspergillus
           niger (strain CBS 513.88 / FGSC A1513) GN=An14g05990
           PE=4 SV=1
          Length = 810

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 387 PMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVH---PLHSSPSPN 512
           P  +L  P +P  H+P+   +P P+G FG ++H   PL SSP P+
Sbjct: 266 PAQSLPVPRYP--HVPAENLYPSPMGRFGPQLHDGPPLGSSPLPD 308


>tr|Q03GI4|Q03GI4_PEDPA Predicted permease OS=Pediococcus
           pentosaceus (strain ATCC 25745 / 183-1w) GN=PEPE_0601
           PE=4 SV=1
          Length = 376

 Score = 34.3 bits (77), Expect = 4.2
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +2

Query: 197 C*VVATFFSFNNAFLDTISLPITLFGFLYLPCHPGLSLKAKMRYGQ*MASQSLRMT-MSL 373
           C  +   F+    F+ T+ +PI L  FLY   +P + L  K+RY +    ++L +  + +
Sbjct: 27  CTKIDFLFTPIGTFISTVFMPIILATFLYYMLNPLVKLLTKVRYKKFKIPRTLAIVIVFV 86

Query: 374 LSLAAYVRSLTPFVPN 421
           L +   V  ++ F+PN
Sbjct: 87  LFITLIVWGISSFLPN 102


>tr|Q7S4X1|Q7S4X1_NEUCR Predicted protein OS=Neurospora crassa
            GN=NCU02354 PE=4 SV=2
          Length = 1286

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 363  LCHYSHLLPMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHP 488
            + H+SH  P  +   P+FPT   P+  H PPP+GT  ++ HP
Sbjct: 1020 VAHHSHSHPQPSPIAPNFPT---PNRHHQPPPMGT-PMQQHP 1057


>tr|O24099|O24099_MEDTR MtN12 protein (Fragment) OS=Medicago
           truncatula GN=MtN12 PE=2 SV=1
          Length = 113

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +3

Query: 372 YSHLLPMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSSPSPNLRTF 524
           Y H  P++   PP   T   P     PPP+ T+     P++ SP P + T+
Sbjct: 28  YPHPKPVYHSPPPPVHTYPKPVYHSPPPPVHTYVPHPKPVYHSPPPPVHTY 78


>tr|A8PSV8|A8PSV8_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_0324 PE=4 SV=1
          Length = 1140

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 384 LPMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSSPSPNLR 518
           LP+  L P      H+PSS+H PP    F L + PL +     +R
Sbjct: 227 LPVPPLQPSQSQRPHIPSSKHAPPLSAPFALNMSPLDAPTGTGVR 271


>tr|Q6EUE3|Q6EUE3_ORYSJ Putative uncharacterized protein
           OJ1705_E12.47 OS=Oryza sativa subsp. japonica
           GN=OJ1705_E12.47 PE=4 SV=1
          Length = 183

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = -1

Query: 517 RRFGDGEEWR-------GWTRRPKVPRGGGKCRELGRCRVGNEGGER 398
           RR+G G  W        GW RRP   RGGG  R   RC  G  G  R
Sbjct: 39  RRYGGGR-WEYGRGGGGGWIRRPARQRGGGGRRRRRRCGGGGGGAAR 84


>tr|Q4WCR7|Q4WCR7_ASPFU GNAT family acetyltransferase, putative
           OS=Aspergillus fumigatus GN=AFUA_6G02180 PE=4 SV=1
          Length = 381

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 369 HYSHLLPMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSSPS--PNLRTFL 527
           H S+  P    SPP  P    PS RH  PP+    L V P  SSPS  PN+ + L
Sbjct: 10  HQSNKAPS---SPPLSPPASSPSPRHSRPPMQPPSLLVLPQSSSPSATPNIASRL 61


>tr|B0YDN0|B0YDN0_ASPFC GNAT family acetyltransferase, putative
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_096160 PE=4 SV=1
          Length = 381

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 369 HYSHLLPMFALSPPSFPTLHLPSSRHFPPPLGTFGLRVHPLHSSPS--PNLRTFL 527
           H S+  P    SPP  P    PS RH  PP+    L V P  SSPS  PN+ + L
Sbjct: 10  HQSNKAPS---SPPLSPPASSPSPRHSRPPMQPPSLLVLPQSSSPSATPNIASRL 61