BP918688 |
Clone id |
YMU001_000116_D05 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_D05. |
Accession |
BP918688 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3998Contig1 |
Sequence |
GCAGAGGACTTGAGGAGGAAGCATCGCGTGCGGGACTGCAGCAGACTTTCATACTCCGTC AAAATGGGTAAACAATCTAAAGGGAAGAAGAAAGAGATTATGAGAATTGAACGTGAATCT GTCATCATGACTATGAAGCCCCGGTTGGTGATGGGACTAGCTGATCTTTTGGAACTAGAT TCTGATAGAGAAGAGTTTCTCACACTGTGCAAGCGTATCGATTCAACCATCAGAGCCTGG TATCATCAAGAGTTTGAGGAAATCATGCAATTGTATTCTCTCTTTGATCCTGTACATGGA ACCAAGAAGCTGGAGCAACAAAGTTTGTCTCCTGCAAGGGTCGATAGCTTAGAGCAACAG TTTATTCACCATCTATTTAAGATTATGGAGAAGAGTAACTATAAGCTTCTAAGTGAAGAG GAGGTGGAAATAGCAACGTCAGGGCAATATCTCCTGAACTTGCCAATTGCAGTTGATTCC TCAAAGCTTGATAGTAAGTTGTTTTCCAAATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96AN5 |
Definition |
sp|Q96AN5|TM143_HUMAN Transmembrane protein 143 OS=Homo sapiens |
Align length |
66 |
Score (bit) |
32.3 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PA41 |
Definition |
tr|A7PA41|A7PA41_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
127 |
Score (bit) |
177.0 |
E-value |
3.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918688|Adiantum capillus-veneris mRNA, clone: YMU001_000116_D05. (513 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PA41|A7PA41_VITVI Chromosome chr14 scaffold_9, whole genome... 177 3e-43 tr|A5BSY1|A5BSY1_VITVI Putative uncharacterized protein OS=Vitis... 177 3e-43 tr|Q5JK37|Q5JK37_ORYSJ cDNA clone:J033024D22, full insert sequen... 171 1e-41 tr|B8A8R7|B8A8R7_ORYSI Putative uncharacterized protein OS=Oryza... 171 1e-41 tr|A3A165|A3A165_ORYSJ Putative uncharacterized protein OS=Oryza... 171 1e-41 tr|Q2R3B7|Q2R3B7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 168 2e-40 tr|B8BKU8|B8BKU8_ORYSI Putative uncharacterized protein OS=Oryza... 168 2e-40 tr|A3CBV5|A3CBV5_ORYSJ Putative uncharacterized protein OS=Oryza... 168 2e-40 tr|Q9LT83|Q9LT83_ARATH Arabidopsis thaliana genomic DNA, chromos... 167 2e-40 tr|Q8RWC3|Q8RWC3_ARATH Putative uncharacterized protein At3g1934... 167 2e-40 tr|Q2QQX3|Q2QQX3_ORYSJ Os12g0479900 protein OS=Oryza sativa subs... 166 8e-40 tr|B8BPM6|B8BPM6_ORYSI Putative uncharacterized protein OS=Oryza... 166 8e-40 tr|B6UEG7|B6UEG7_MAIZE Putative uncharacterized protein OS=Zea m... 162 7e-39 tr|B6SGC0|B6SGC0_MAIZE Putative uncharacterized protein OS=Zea m... 162 9e-39 tr|B4FFF5|B4FFF5_MAIZE Putative uncharacterized protein OS=Zea m... 162 9e-39 tr|A7PA42|A7PA42_VITVI Chromosome chr14 scaffold_9, whole genome... 159 6e-38 tr|A3CHB1|A3CHB1_ORYSJ Putative uncharacterized protein OS=Oryza... 156 5e-37 tr|A9SZ61|A9SZ61_PHYPA Predicted protein OS=Physcomitrella paten... 154 2e-36 tr|A9SAD5|A9SAD5_PHYPA Predicted protein OS=Physcomitrella paten... 152 7e-36 tr|A5BSY0|A5BSY0_VITVI Putative uncharacterized protein OS=Vitis... 137 4e-31 tr|Q9FFY1|Q9FFY1_ARATH Genomic DNA, chromosome 5, P1 clone:MAC12... 44 0.006 tr|A4C4R3|A4C4R3_9GAMM Putative orphan protein; putative membran... 43 0.011 tr|B7KI58|B7KI58_9CHRO Putative uncharacterized protein OS=Cyano... 42 0.014 tr|A0YZT7|A0YZT7_9CYAN Putative membrane protein OS=Lyngbya sp. ... 42 0.018 tr|A0XYM2|A0XYM2_9GAMM Putative orphan protein ; putative membra... 42 0.023 tr|Q3ILG6|Q3ILG6_PSEHT Putative orphan protein ; putative membra... 40 0.068 tr|A3IRA0|A3IRA0_9CHRO Putative orphan protein ; putative membra... 40 0.068 tr|B1WYH9|B1WYH9_CYAA5 Putative uncharacterized protein OS=Cyano... 39 0.15 tr|B7S294|B7S294_9GAMM Putative uncharacterized protein OS=marin... 38 0.26 tr|B4RWA3|B4RWA3_ALTMD Putative orphan protein; putative membran... 37 0.58
>tr|A7PA41|A7PA41_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037962001 PE=4 SV=1 Length = 488
Score = 177 bits (449), Expect = 3e-43 Identities = 82/127 (64%), Positives = 107/127 (84%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI +KP+L+M LA+L+E SDR EFL LCKR++ TIRAWY +FE++MQL Sbjct: 13 EVIRLERESVIPILKPKLIMTLANLIEHSSDRAEFLKLCKRVEYTIRAWYLLQFEDLMQL 72
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 YSLFDPVHG KKLEQQ+L P +D LEQ F+ +LF++MEKSN+K+ +EEE+++A SGQYL Sbjct: 73 YSLFDPVHGAKKLEQQNLPPEEIDVLEQNFLMYLFQVMEKSNFKIATEEEIDVALSGQYL 132
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 133 LNLPITV 139
>tr|A5BSY1|A5BSY1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029911 PE=4 SV=1 Length = 276
Score = 177 bits (449), Expect = 3e-43 Identities = 82/127 (64%), Positives = 107/127 (84%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI +KP+L+M LA+L+E SDR EFL LCKR++ TIRAWY +FE++MQL Sbjct: 13 EVIRLERESVIPILKPKLIMTLANLIEHSSDRAEFLKLCKRVEYTIRAWYLLQFEDLMQL 72
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 YSLFDPVHG KKLEQQ+L P +D LEQ F+ +LF++MEKSN+K+ +EEE+++A SGQYL Sbjct: 73 YSLFDPVHGAKKLEQQNLPPEEIDVLEQNFLMYLFQVMEKSNFKIATEEEIDVALSGQYL 132
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 133 LNLPITV 139
>tr|Q5JK37|Q5JK37_ORYSJ cDNA clone:J033024D22, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0052O12.17 PE=2 SV=1 Length = 488
Score = 171 bits (434), Expect = 1e-41 Identities = 79/127 (62%), Positives = 107/127 (84%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI MKP+L+M LA L+E SDREEFL LCKRI+ TIRAWYH +F+++M+L Sbjct: 13 EVVRLERESVIPIMKPKLIMKLAYLIEQQSDREEFLKLCKRIEYTIRAWYHLQFDDMMEL 72
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 ++LFDPVHG +KL+QQ+ S VD+LEQ F+ + F++M+KSN+ +LS++EVE+A SGQYL Sbjct: 73 FALFDPVHGAQKLQQQNFSTEEVDTLEQNFLTYFFQVMQKSNFNILSDDEVELAHSGQYL 132
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 133 LNLPIKV 139
>tr|B8A8R7|B8A8R7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05039 PE=4 SV=1 Length = 749
Score = 171 bits (434), Expect = 1e-41 Identities = 79/127 (62%), Positives = 107/127 (84%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI MKP+L+M LA L+E SDREEFL LCKRI+ TIRAWYH +F+++M+L Sbjct: 13 EVVRLERESVIPIMKPKLIMKLAYLIEQQSDREEFLKLCKRIEYTIRAWYHLQFDDMMEL 72
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 ++LFDPVHG +KL+QQ+ S VD+LEQ F+ + F++M+KSN+ +LS++EVE+A SGQYL Sbjct: 73 FALFDPVHGAQKLQQQNFSTEEVDTLEQNFLTYFFQVMQKSNFNILSDDEVELAHSGQYL 132
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 133 LNLPIKV 139
>tr|A3A165|A3A165_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004537 PE=4 SV=1 Length = 711
Score = 171 bits (434), Expect = 1e-41 Identities = 79/127 (62%), Positives = 107/127 (84%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI MKP+L+M LA L+E SDREEFL LCKRI+ TIRAWYH +F+++M+L Sbjct: 13 EVVRLERESVIPIMKPKLIMKLAYLIEQQSDREEFLKLCKRIEYTIRAWYHLQFDDMMEL 72
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 ++LFDPVHG +KL+QQ+ S VD+LEQ F+ + F++M+KSN+ +LS++EVE+A SGQYL Sbjct: 73 FALFDPVHGAQKLQQQNFSTEEVDTLEQNFLTYFFQVMQKSNFNILSDDEVELAHSGQYL 132
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 133 LNLPIKV 139
>tr|Q2R3B7|Q2R3B7_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0528400 PE=2 SV=1 Length = 503
Score = 168 bits (425), Expect = 2e-40 Identities = 79/127 (62%), Positives = 106/127 (83%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI +KP+L+M LA L+E D DR EFL LC+R++ TIRAWY +FE++MQL Sbjct: 24 EVIRLERESVIPILKPKLIMKLAYLVEQDKDRGEFLKLCRRVEYTIRAWYLLQFEDLMQL 83
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 Y+LFDPV+G K LEQQSL+P +++LE F+ ++F+IMEKSN+KLLS+EE ++A SGQYL Sbjct: 84 YALFDPVNGVKSLEQQSLTPDEIETLELNFLTYMFQIMEKSNFKLLSDEEYDVAQSGQYL 143
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 144 LNLPIKV 150
>tr|B8BKU8|B8BKU8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36330 PE=4 SV=1 Length = 503
Score = 168 bits (425), Expect = 2e-40 Identities = 79/127 (62%), Positives = 106/127 (83%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI +KP+L+M LA L+E D DR EFL LC+R++ TIRAWY +FE++MQL Sbjct: 24 EVIRLERESVIPILKPKLIMKLAYLVEQDKDRGEFLKLCRRVEYTIRAWYLLQFEDLMQL 83
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 Y+LFDPV+G K LEQQSL+P +++LE F+ ++F+IMEKSN+KLLS+EE ++A SGQYL Sbjct: 84 YALFDPVNGVKSLEQQSLTPDEIETLELNFLTYMFQIMEKSNFKLLSDEEYDVAQSGQYL 143
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 144 LNLPIKV 150
>tr|A3CBV5|A3CBV5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032777 PE=4 SV=1 Length = 480
Score = 168 bits (425), Expect = 2e-40 Identities = 79/127 (62%), Positives = 106/127 (83%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+ERESVI +KP+L+M LA L+E D DR EFL LC+R++ TIRAWY +FE++MQL Sbjct: 24 EVIRLERESVIPILKPKLIMKLAYLVEQDKDRGEFLKLCRRVEYTIRAWYLLQFEDLMQL 83
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 Y+LFDPV+G K LEQQSL+P +++LE F+ ++F+IMEKSN+KLLS+EE ++A SGQYL Sbjct: 84 YALFDPVNGVKSLEQQSLTPDEIETLELNFLTYMFQIMEKSNFKLLSDEEYDVAQSGQYL 143
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 144 LNLPIKV 150
>tr|Q9LT83|Q9LT83_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14 OS=Arabidopsis thaliana PE=4 SV=1 Length = 516
Score = 167 bits (424), Expect = 2e-40 Identities = 77/127 (60%), Positives = 106/127 (83%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+E ESVI +KP+L+M LA+L+E +DR+EFL LCKRI+ T+RAWY +FE++MQL Sbjct: 8 EVIRLEPESVIPILKPKLIMTLANLIEHSNDRQEFLKLCKRIEYTVRAWYLLQFEDLMQL 67
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 YSLFDPVHG +K++QQ+L+ +D LEQ F+ +LF++MEKSN+K+ S EE+E+A SGQYL Sbjct: 68 YSLFDPVHGAQKIQQQNLTSQEIDVLEQNFLAYLFQVMEKSNFKITSNEEMEVAHSGQYL 127
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 128 LNLPIKV 134
>tr|Q8RWC3|Q8RWC3_ARATH Putative uncharacterized protein At3g19340 OS=Arabidopsis thaliana GN=At3g19340 PE=2 SV=1 Length = 487
Score = 167 bits (424), Expect = 2e-40 Identities = 77/127 (60%), Positives = 106/127 (83%) Frame = +1
Query: 94 EIMRIERESVIMTMKPRLVMGLADLLELDSDREEFLTLCKRIDSTIRAWYHQEFEEIMQL 273 E++R+E ESVI +KP+L+M LA+L+E +DR+EFL LCKRI+ T+RAWY +FE++MQL Sbjct: 8 EVIRLEPESVIPILKPKLIMTLANLIEHSNDRQEFLKLCKRIEYTVRAWYLLQFEDLMQL 67
Query: 274 YSLFDPVHGTKKLEQQSLSPARVDSLEQQFIHHLFKIMEKSNYKLLSEEEVEIATSGQYL 453 YSLFDPVHG +K++QQ+L+ +D LEQ F+ +LF++MEKSN+K+ S EE+E+A SGQYL Sbjct: 68 YSLFDPVHGAQKIQQQNLTSQEIDVLEQNFLAYLFQVMEKSNFKITSNEEMEVAHSGQYL 127
Query: 454 LNLPIAV 474 LNLPI V Sbjct: 128 LNLPIKV 134
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