BP918691 |
Clone id |
YMU001_000116_D08 |
Library |
YMU01 |
Length |
326 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_D08. |
Accession |
BP918691 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATTCGCGGCCGCGAATTGCTATTTTGGTCTCCACCTCACCAAGCGCCAGTTTGATTTGC CCCACAGAAGCAGGGCCATAATCCACATCTATACGGTCATCATGCTTTGAGCTGCCACTT ATACCCAGCTGCTCCAAGAGCTGTAGCTTCTGCCTTTGCAGAACTTCCAATTCCTCGGTG TACATCTCTTTCCGATTTCTTATAATAGCCATCAAATTGAACCTGATCTCACTCTTGAAG TATTTTTCAATCCTTTCCTGTATTACTGGCTGAACTTTCTTCAACCACTCCATGCTATCC GGCTCTCCACTTCCACACTCTCCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q06AT3 |
Definition |
sp|Q06AT3|UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa |
Align length |
48 |
Score (bit) |
51.6 |
E-value |
1.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RL89 |
Definition |
tr|A9RL89|A9RL89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
49 |
Score (bit) |
84.0 |
E-value |
4.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918691|Adiantum capillus-veneris mRNA, clone: YMU001_000116_D08. (308 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RL89|A9RL89_PHYPA Predicted protein OS=Physcomitrella paten... 84 4e-15 tr|Q6K6Z5|Q6K6Z5_ORYSJ (RAP Annotation release2) Peptidase C12 O... 76 7e-13 tr|B7E2T1|B7E2T1_ORYSJ (RAP Annotation release2) Peptidase C12 O... 76 7e-13 tr|A2XB54|A2XB54_ORYSI Putative uncharacterized protein OS=Oryza... 76 7e-13 tr|A9NV68|A9NV68_PICSI Putative uncharacterized protein OS=Picea... 75 2e-12 tr|A7QSP7|A7QSP7_VITVI Chromosome chr4 scaffold_162, whole genom... 73 8e-12 tr|A5AU65|A5AU65_VITVI Putative uncharacterized protein OS=Vitis... 73 8e-12 tr|Q9FFF2|Q9FFF2_ARATH Ubiquitin C-terminal hydrolase-like prote... 72 2e-11 tr|Q9SHY9|Q9SHY9_ARATH F1E22.3 OS=Arabidopsis thaliana PE=4 SV=1 69 9e-11 tr|Q945M7|Q945M7_ARATH F5I14.29/F5I14.29 OS=Arabidopsis thaliana... 69 9e-11 tr|O04482|O04482_ARATH F5I14.18 protein (Putative uncharacterize... 69 9e-11 tr|Q6ETK2|Q6ETK2_ORYSJ Os02g0180100 protein OS=Oryza sativa subs... 60 7e-08 tr|A3A3T0|A3A3T0_ORYSJ Putative uncharacterized protein OS=Oryza... 60 7e-08 tr|A2X1M0|A2X1M0_ORYSI Putative uncharacterized protein OS=Oryza... 60 7e-08 tr|B4F8D8|B4F8D8_MAIZE Putative uncharacterized protein OS=Zea m... 59 9e-08 tr|Q4JHZ2|Q4JHZ2_ICTPU Ubiquitin C-terminal hydrolase (Fragment)... 55 2e-06 tr|A8XHZ7|A8XHZ7_CAEBR CBR-UBH-4 protein OS=Caenorhabditis brigg... 54 5e-06 tr|B6E460|B6E460_ICTPU Ubiquitin carboxy-terminal hydrolase L5 O... 52 1e-05 tr|B6PHI7|B6PHI7_BRAFL Putative uncharacterized protein OS=Branc... 52 2e-05 tr|Q5LJB2|Q5LJB2_HUMAN Ubiquitin carboxyl-terminal hydrolase L5 ... 52 2e-05 tr|Q5LJB0|Q5LJB0_HUMAN Ubiquitin carboxyl-terminal hydrolase L5 ... 52 2e-05 tr|Q5LJA3|Q5LJA3_HUMAN Ubiquitin carboxyl-terminal hydrolase L5 ... 52 2e-05 tr|B7Z9U9|B7Z9U9_HUMAN cDNA, FLJ78963, highly similar to Ubiquit... 52 2e-05 tr|B4DW59|B4DW59_HUMAN cDNA FLJ60356, highly similar to Ubiquiti... 52 2e-05 tr|B2RB07|B2RB07_HUMAN cDNA, FLJ95243, highly similar to Homo sa... 52 2e-05 tr|Q6NWL6|Q6NWL6_DANRE Ubiquitin carboxyl-terminal hydrolase L5 ... 51 3e-05 tr|Q4S6N9|Q4S6N9_TETNG Chromosome undetermined SCAF14724, whole ... 51 3e-05 tr|B5X5H3|B5X5H3_SALSA Ubiquitin carboxyl-terminal hydrolase iso... 51 3e-05 tr|B5X2A6|B5X2A6_SALSA Ubiquitin carboxyl-terminal hydrolase iso... 51 3e-05 tr|Q5HZY3|Q5HZY3_RAT Ubiquitin carboxyl-terminal esterase L5 OS=... 51 3e-05
>tr|A9RL89|A9RL89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176083 PE=4 SV=1 Length = 323
Score = 84.0 bits (206), Expect = 4e-15 Identities = 38/49 (77%), Positives = 44/49 (89%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMY 162 LGECG PDSM+WL+ VQPVIQERIEKY KSEIRFNLMA+I+NRK++Y Sbjct: 181 LGECGGEGPDSMDWLQMVQPVIQERIEKYSKSEIRFNLMAVIKNRKDIY 229
>tr|Q6K6Z5|Q6K6Z5_ORYSJ (RAP Annotation release2) Peptidase C12 OS=Oryza sativa subsp. japonica GN=P0474F11.34-1 PE=2 SV=1 Length = 331
Score = 76.3 bits (186), Expect = 7e-13 Identities = 35/50 (70%), Positives = 45/50 (90%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG+C SG PD ++WL+ VQPVIQ+RIE+Y +SEIRFNLMAII+NRK++YT Sbjct: 181 LGQC-SGGPDDLDWLRMVQPVIQKRIERYSQSEIRFNLMAIIKNRKDVYT 229
>tr|B7E2T1|B7E2T1_ORYSJ (RAP Annotation release2) Peptidase C12 OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 278
Score = 76.3 bits (186), Expect = 7e-13 Identities = 35/50 (70%), Positives = 45/50 (90%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG+C SG PD ++WL+ VQPVIQ+RIE+Y +SEIRFNLMAII+NRK++YT Sbjct: 128 LGQC-SGGPDDLDWLRMVQPVIQKRIERYSQSEIRFNLMAIIKNRKDVYT 176
>tr|A2XB54|A2XB54_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09494 PE=4 SV=1 Length = 331
Score = 76.3 bits (186), Expect = 7e-13 Identities = 35/50 (70%), Positives = 45/50 (90%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG+C SG PD ++WL+ VQPVIQ+RIE+Y +SEIRFNLMAII+NRK++YT Sbjct: 181 LGQC-SGGPDDLDWLRMVQPVIQKRIERYSQSEIRFNLMAIIKNRKDVYT 229
>tr|A9NV68|A9NV68_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 340
Score = 75.1 bits (183), Expect = 2e-12 Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 4/101 (3%) Frame = -1
Query: 293 SGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYTXXXXXXXXXXXXXXX 114 +G +S+EWLK VQPVIQERIEKY KSEIRFNLMAII+NR ++Y Sbjct: 185 NGSRESLEWLKLVQPVIQERIEKYSKSEIRFNLMAIIKNRLDIYKAEQRDLENRKKQIQQ 244
Query: 113 XLGISGSSKHDDRIDVDYG----PASVGQIKLALGEVETKI 3 L S DDR+DVD G ASV + +L E++ ++ Sbjct: 245 QLDAS-KCNGDDRMDVDNGSGRQSASVEGLNRSLVEIDFEL 284
>tr|A7QSP7|A7QSP7_VITVI Chromosome chr4 scaffold_162, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005967001 PE=4 SV=1 Length = 321
Score = 72.8 bits (177), Expect = 8e-12 Identities = 33/50 (66%), Positives = 44/50 (88%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG+C G+ D ++W++ VQPVIQERIE+Y +SEIRFNLMAII+NRK++YT Sbjct: 181 LGQCPGGQGD-LDWVRMVQPVIQERIERYSRSEIRFNLMAIIKNRKDIYT 229
>tr|A5AU65|A5AU65_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027729 PE=4 SV=1 Length = 334
Score = 72.8 bits (177), Expect = 8e-12 Identities = 33/50 (66%), Positives = 44/50 (88%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG+C G+ D ++W++ VQPVIQERIE+Y +SEIRFNLMAII+NRK++YT Sbjct: 181 LGQCPGGQGD-LDWVRMVQPVIQERIERYSRSEIRFNLMAIIKNRKDIYT 229
>tr|Q9FFF2|Q9FFF2_ARATH Ubiquitin C-terminal hydrolase-like protein (At5g16310) OS=Arabidopsis thaliana GN=At5g16310/MQK4_3 PE=2 SV=1 Length = 334
Score = 71.6 bits (174), Expect = 2e-11 Identities = 35/102 (34%), Positives = 60/102 (58%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYTXXXXXXXXXX 129 LG+C GEP+ +EWL+ VQPV+QE+I++Y ++EIRF+L+A+++NRKEMY Sbjct: 187 LGQC-LGEPEGIEWLRMVQPVVQEQIDRYSQNEIRFSLLAVVKNRKEMYVAELKEYQRKR 245
Query: 128 XXXXXXLGISGSSKHDDRIDVDYGPASVGQIKLALGEVETKI 3 LG + K+ ++ + + ++ + + V KI Sbjct: 246 ERVLQQLGALQADKYAEKSSYEALDRELSEVNIGIETVSQKI 287
>tr|Q9SHY9|Q9SHY9_ARATH F1E22.3 OS=Arabidopsis thaliana PE=4 SV=1 Length = 361
Score = 69.3 bits (168), Expect = 9e-11 Identities = 32/50 (64%), Positives = 42/50 (84%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG C G+ +EWL+ VQPVIQERIE+Y +SEIRFNL+A+I+NRK++YT Sbjct: 212 LGPC-PGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKDIYT 260
>tr|Q945M7|Q945M7_ARATH F5I14.29/F5I14.29 OS=Arabidopsis thaliana PE=2 SV=1 Length = 330
Score = 69.3 bits (168), Expect = 9e-11 Identities = 32/50 (64%), Positives = 42/50 (84%) Frame = -1
Query: 308 LGECGSGEPDSMEWLKKVQPVIQERIEKYFKSEIRFNLMAIIRNRKEMYT 159 LG C G+ +EWL+ VQPVIQERIE+Y +SEIRFNL+A+I+NRK++YT Sbjct: 181 LGPC-PGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKDIYT 229
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