BP918695
Clone id YMU001_000116_D12
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000116_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGCATCTCTTTCATCGACAAGGCAAATTGCAATCTTGGTTAAGAACTTAGCTCCCCCTA
GGTGTGGAATGCCTGACTGCTTTGCCCACCGCTTCTTTTTTGTTGCTGCTACCATCCGGT
TCAACCCCACTTAGCCAGATCAACTGGTACGTTTTTGTGCTGGGGTACTAGCTTTTGTAA
AGCAGAAGCTAGATTTCTTTCAGATCTTGTATACCTAGTATGTCTGTCAAAGTGCAAATG
CTGGTGTAGGACCCTCATGAGATACTCAATCCTTTTTTCCTTGACGCTACTTAAAGTAGG
GAGTGTCACCGTGCTGATGTCTTCATCTGCATATCCTTGCGGCTCATAGGCTCCCCCCTC
AGTAACTTGGTGATTTCTGCTAGGGTATCCATGGTTATCTCTATTGATATCTTTTCTCTC
ACTGCATTTGTTAGTGCTGTCGTAGCTTTGTCTTCATCTACTTTTTGTAGATTTGTGATT
AACTCATGGGCTCACCTGTAGTCAGCTTGGACTATGGGTTCTGACAAGAAGTCCTCAACG
ACTATCCTAGAGATTGCCATGTCTGCACTTT
■■Homology search results ■■ -
sp_hit_id Q55468
Definition sp|Q55468|QUEC_SYNY3 Queuosine biosynthesis protein queC OS=Synechocystis sp. (strain PCC 6803)
Align length 39
Score (bit) 30.4
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918695|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_D12.
(571 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q55468|QUEC_SYNY3 Queuosine biosynthesis protein queC OS=Syne... 30 6.5

>sp|Q55468|QUEC_SYNY3 Queuosine biosynthesis protein queC
OS=Synechocystis sp. (strain PCC 6803) GN=queC PE=3 SV=2
Length = 232

Score = 30.4 bits (67), Expect = 6.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2

Query: 237 LHFDRHTRYTRSERNLASALQKL-VPQHKNVPVDLAKWG 124
L F+ R+ R R A +Q L +P+H ++ +DLA+WG
Sbjct: 32 LSFNYGQRHDRELRAAADIVQALGIPEHFSINLDLAQWG 70


tr_hit_id A9BG64
Definition tr|A9BG64|A9BG64_PETMO UvrD/REP helicase OS=Petrotoga mobilis (strain DSM 10674 / SJ95)
Align length 117
Score (bit) 35.4
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918695|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_D12.
(571 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9BG64|A9BG64_PETMO UvrD/REP helicase OS=Petrotoga mobilis (s... 35 2.3
tr|B7QLT8|B7QLT8_IXOSC Cyclic nucleotide-gated channel 2B, putat... 35 2.9
tr|Q8IJQ9|Q8IJQ9_PLAF7 Putative uncharacterized protein OS=Plasm... 35 3.0
tr|B4GUZ7|B4GUZ7_DROPE GL12930 OS=Drosophila persimilis GN=GL129... 35 3.9
tr|B8A034|B8A034_MAIZE Putative uncharacterized protein OS=Zea m... 34 5.0
tr|B5RTK2|B5RTK2_DEBHA DEHA2D17644p OS=Debaryomyces hansenii GN=... 33 8.5

>tr|A9BG64|A9BG64_PETMO UvrD/REP helicase OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=Pmob_1101 PE=4 SV=1
Length = 1065

Score = 35.4 bits (80), Expect = 2.3
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Frame = -2

Query: 474 KSTKSR*--RQSYDSTNKCSERKDINRDNHGYPSRNHQVTEGGAYEPQGYADEDI---ST 310
K TK+R +Q + N SE RDN P + ++ E +++ + ++ +I T
Sbjct: 366 KLTKNRRSHQQIINFANHLSETSLFKRDNLQMPDIDPKLLENLSFQEEDISEPEIPPQET 425

Query: 309 VTLPTLSSVKEKRIEY-LMRVLHQHLHFDRHTRYTRSERNLASALQKLVPQHKNVPV 142
T+PTLS KR++Y L+ ++ ++ R LA ++KL+ Q + V
Sbjct: 426 ETIPTLSEDDTKRVKYILIEPTEENGLNNQENRLAIEIDTLAKVIKKLLGQEMDFKV 482


>tr|B7QLT8|B7QLT8_IXOSC Cyclic nucleotide-gated channel 2B, putative
OS=Ixodes scapularis GN=IscW_ISCW013674 PE=4 SV=1
Length = 479

Score = 35.0 bits (79), Expect = 2.9
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -3

Query: 482 LITNLQKVDEDKATTALTNAVREKISIEITMDTLAEITKLLRGEP 348
L TN Q +DEDK T+ L + ++ +I+I + +DTL + EP
Sbjct: 230 LWTNKQSLDEDKITSMLPDKLKAEIAIHVHLDTLKRVRLFQDCEP 274


>tr|Q8IJQ9|Q8IJQ9_PLAF7 Putative uncharacterized protein OS=Plasmodium
falciparum (isolate 3D7) GN=PF10_0133 PE=4 SV=1
Length = 2238

Score = 35.0 bits (79), Expect = 3.0
Identities = 21/100 (21%), Positives = 41/100 (41%)
Frame = -2

Query: 483 VNHKSTKSR*RQSYDSTNKCSERKDINRDNHGYPSRNHQVTEGGAYEPQGYADEDISTVT 304
++H + + R SY+ N + D N++ GY + N DE + V+
Sbjct: 1380 LDHNNNNNNNRVSYEYNNNLDQENDTNQNKKGYVTNNINYNIQTNNSNNFNNDEYFNHVS 1439

Query: 303 LPTLSSVKEKRIEYLMRVLHQHLHFDRHTRYTRSERNLAS 184
L ++ K YL +L+ + + + E+N+ S
Sbjct: 1440 LRNINETYIKENNYLPLILYNKNNLENSFSFNNIEKNIKS 1479


>tr|B4GUZ7|B4GUZ7_DROPE GL12930 OS=Drosophila persimilis GN=GL12930
PE=4 SV=1
Length = 1101

Score = 34.7 bits (78), Expect = 3.9
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = -2

Query: 453 RQSYDSTNKCSERKDINRDNHGYPSRNHQVTEGGAYEPQGYADEDISTVT---LPTLSSV 283
+QSY S+ S +D+N + N+ +T+ + + +G +E +T T PT ++
Sbjct: 150 QQSYASSYINSYEQDVN-------TNNNNITQMPSSQMRGLLNETTTTTTPKTTPTTTAT 202

Query: 282 KEKRIEYLMRVLHQHLHFDRHTRYTRSERNLASALQKL 169
E + + +HL HT + + R+ +S+L +
Sbjct: 203 MPMETEAMAAIKIEHLEDSNHTHNSHNSRSSSSSLMAM 240


>tr|B8A034|B8A034_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 613

Score = 34.3 bits (77), Expect = 5.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -2

Query: 492 SP*VNHKSTKSR*RQSYDSTNKCSERKDIN---RDNHGYPSRNHQVTEGGAYEPQGYADE 322
SP V+ K T ++ NK +E D++ DNH NH G + E QG ++
Sbjct: 222 SPDVDSKETHDHVQED---ENKVAEEHDVHATDHDNHATDHDNHAAESGASVEQQGSVNK 278

Query: 321 DISTVTLPTLSSVKEK 274
D +V TL + K
Sbjct: 279 DDISVEAGTLDELLHK 294


>tr|B5RTK2|B5RTK2_DEBHA DEHA2D17644p OS=Debaryomyces hansenii
GN=DEHA2D17644g PE=4 SV=1
Length = 1140

Score = 33.5 bits (75), Expect = 8.5
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3

Query: 485 ELITNLQKVDEDKATTALTNAVREK----ISIEITMDTLAEIT 369
ELI NL+ VD D A TA+ RE+ SIEIT +T E+T
Sbjct: 333 ELIENLKVVDSDIADTAMMTFYRERADKLASIEITENTWKELT 375