BP918698
Clone id YMU001_000116_E03
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000116_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGAGCCAATTAGAGAGCATCGTCTGCTCATTCATCTGATAAAGTCAGTTAAGGAGGTTTT
GGGGGCATGACATAGAGGAGAAAAGGCTCAGCATTTTTTAGCAGATTAGTTGGGATTCTG
TGAGTTTGGTTATTTAGGAAGCCGCTTCTTCCTAATTTAGGGCAGGTGTGTGTGTGTGCG
CCCGTATAGTGAAGGTGTCTGTGTTCATTAAGGGAAGGTGTGAATTGCCAAATCAAATAA
CCTGGAGCAAGCATATCACACTTCAAAGCTGTATTTTTTATATAAGGGCAATGACATTGC
AAGCTTGAAAGGTGCCTTTATACGGAGCAATTTCCATTGGATCTCAGCAACAATGAGTAT
ATTTTCAGTTTGCTGGCGACCTTTGGAGCGATGTCTTTGGTCTTCAGATGCTGCAGATGA
CCAACAAGATGGGTCCTTATGGCACAAGGATGTCA
■■Homology search results ■■ -
sp_hit_id Q6GL52
Definition sp|Q6GL52|ZN574_XENTR Zinc finger protein 574 OS=Xenopus tropicalis
Align length 51
Score (bit) 33.1
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918698|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_E03.
(455 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6GL52|ZN574_XENTR Zinc finger protein 574 OS=Xenopus tropica... 33 0.58
sp|Q99946|PRRT1_HUMAN Proline-rich transmembrane protein 1 OS=Ho... 31 2.9
sp|Q6MG82|PRRT1_RAT Proline-rich transmembrane protein 1 OS=Ratt... 30 3.8
sp|O35449|PRRT1_MOUSE Proline-rich transmembrane protein 1 OS=Mu... 30 3.8
sp|Q1ISV1|PPNK_ACIBL Probable inorganic polyphosphate/ATP-NAD ki... 30 4.9
sp|Q6DBY0|NUP85_DANRE Nucleoporin NUP85 OS=Danio rerio GN=nup85 ... 29 8.4

>sp|Q6GL52|ZN574_XENTR Zinc finger protein 574 OS=Xenopus tropicalis
GN=znf574 PE=2 SV=1
Length = 857

Score = 33.1 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1

Query: 263 KCDMLAPGYLIWQFTPSLNEHRHLHYTGAHTHTCPKLGRS--GFLNNQTHR 117
KCD+ + I L+EH+ +H TG H+CP GR+ F N HR
Sbjct: 738 KCDVCGKAFTI---AVRLSEHKRIH-TGERPHSCPDCGRAYRSFSNLWKHR 784


>sp|Q99946|PRRT1_HUMAN Proline-rich transmembrane protein 1 OS=Homo
sapiens GN=PRRT1 PE=2 SV=2
Length = 306

Score = 30.8 bits (68), Expect = 2.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1

Query: 227 QFTPSLNEHRHLHYTGAHTHTCPKLGRSGFLNN 129
Q PS + H H HY + T T P+LG G ++
Sbjct: 35 QAAPSSHHHHHHHYHQSGTATLPRLGAGGLASS 67


>sp|Q6MG82|PRRT1_RAT Proline-rich transmembrane protein 1 OS=Rattus
norvegicus GN=Prrt1 PE=2 SV=2
Length = 306

Score = 30.4 bits (67), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1

Query: 227 QFTPSLNEHRHLHYTGAHTHTCPKLGRSG 141
Q PS + H H HY + T T P+LG G
Sbjct: 35 QTAPSSHHHHHHHYHQSGTATLPRLGAGG 63


>sp|O35449|PRRT1_MOUSE Proline-rich transmembrane protein 1 OS=Mus
musculus GN=Prrt1 PE=2 SV=1
Length = 306

Score = 30.4 bits (67), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1

Query: 227 QFTPSLNEHRHLHYTGAHTHTCPKLGRSG 141
Q PS + H H HY + T T P+LG G
Sbjct: 35 QTAPSSHHHHHHHYHQSGTATLPRLGAGG 63


>sp|Q1ISV1|PPNK_ACIBL Probable inorganic polyphosphate/ATP-NAD
kinase OS=Acidobacteria bacterium (strain Ellin345)
GN=ppnK PE=3 SV=1
Length = 285

Score = 30.0 bits (66), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1

Query: 302 LQCHCPYIKNTALKCDMLAPGYLIWQFTPSLNE 204
+ C+CP + T L CD++ G ++ +T SLN+
Sbjct: 112 IACNCPLDERTMLACDLIRDGQVLHSYT-SLND 143


>sp|Q6DBY0|NUP85_DANRE Nucleoporin NUP85 OS=Danio rerio GN=nup85
PE=2 SV=1
Length = 649

Score = 29.3 bits (64), Expect = 8.4
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -1

Query: 314 HLSSLQCHCPYIKNTALKCDMLAPGYLIWQFTPSLNEHRHLHYTGA-HTHTCPKLGRSGF 138
HL+ L HC +++ L +L+ ++ L H L + CP+ GR +
Sbjct: 374 HLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVDYLDHCPEFGRV-Y 432

Query: 137 LNNQTHRIPTNLLKNAEPFL 78
L Q R+P + + A L
Sbjct: 433 LELQIERVPLDTERKANKVL 452


tr_hit_id A7RUI7
Definition tr|A7RUI7|A7RUI7_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis
Align length 100
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918698|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_E03.
(455 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7RUI7|A7RUI7_NEMVE Predicted protein (Fragment) OS=Nematoste... 35 2.4
tr|Q7QHM5|Q7QHM5_ANOGA AGAP011255-PA (Fragment) OS=Anopheles gam... 34 4.2
tr|Q6FS04|Q6FS04_CANGA Similar to uniprot|P48353 Saccharomyces c... 33 5.4
tr|A5AZF6|A5AZF6_VITVI Putative uncharacterized protein OS=Vitis... 33 7.1
tr|Q0IEH3|Q0IEH3_AEDAE Putative uncharacterized protein OS=Aedes... 33 9.3

>tr|A7RUI7|A7RUI7_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g30774 PE=4 SV=1
Length = 559

Score = 34.7 bits (78), Expect = 2.4
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = -1

Query: 377 ASKLKIYSLLLRSN---GNCSV*RHLSSLQCHCPYIKNTALKCDMLAPGYLIWQFTPSLN 207
A + IY+++ S+ GN HL+ L HC + + + C + +L+ +++ SL
Sbjct: 292 AFEFDIYAVIKGSSESFGNWWFVSHLTDLLHHCGQLDSNQISCSVSLREFLLLEYSASLM 351

Query: 206 EHRHLHYTGA-HTHTCPKLGRSGFLNNQTHRIPTNLLKNA 90
H L + CP+ GR+ L +P K A
Sbjct: 352 SHHSLWQVAVDYLKHCPQYGRA-HLEEYIEHLPLETDKKA 390


>tr|Q7QHM5|Q7QHM5_ANOGA AGAP011255-PA (Fragment) OS=Anopheles
gambiae GN=AGAP011255 PE=4 SV=4
Length = 956

Score = 33.9 bits (76), Expect = 4.2
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +3

Query: 231 NQITWSKHITLQSCIFYIRAMTLQA*KVPLYGAISIGSQQQ*VYFQFAGDLWSDVFGLQM 410
N ++++ HIT+ + + +I LQ +YGAISI SQ + +FQ W F ++
Sbjct: 698 NNLSYAIHITIATALLFILLAALQ-----IYGAISISSQTRIDWFQ-----WGYQFSIRF 747

Query: 411 LQM 419
+++
Sbjct: 748 IEI 750


>tr|Q6FS04|Q6FS04_CANGA Similar to uniprot|P48353 Saccharomyces
cerevisiae YMR161w HLJ1 OS=Candida glabrata
GN=CAGL0H04499g PE=4 SV=1
Length = 232

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = -3

Query: 411 ASEDQRHRSKGRQQTENILIVAEIQWKLLRIKAPFKLAMSLPLYKKYSF 265
A Q+ R +G Q EN L+ +E+ +++LRI APF L LPL +++ F
Sbjct: 186 AYRQQQQRRQGNQ--ENELVNSEL-YEMLRILAPFLLLFLLPLLERFIF 231


>tr|A5AZF6|A5AZF6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_040324 PE=4 SV=1
Length = 901

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1

Query: 245 PGYLIWQFTPSLNEHRHLHYTGAHTHTCPKLGRSGFLNNQTHRIPTNLLKNAEPFL 78
P L Q +P H +L + AH H+ ++ + G TH + T + +NA+P +
Sbjct: 689 PQTLQQQQSPQARTHSNLLRSSAHHHSRSQVQQGGAQGRATHAVGTGISQNAQPMV 744


>tr|Q0IEH3|Q0IEH3_AEDAE Putative uncharacterized protein OS=Aedes
aegypti GN=AAEL010302 PE=4 SV=1
Length = 619

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1

Query: 269 ALKCDMLAPGYLIWQFTPSLNEHRHLHYTGAHTHTCPKLGRSGFLN 132
ALKCD+ G I LNEH+ LH+ ++ CP G+ LN
Sbjct: 512 ALKCDVC--GKFIRGKPGILNEHKKLHFLKEKSYVCPVCGKGFTLN 555