BP918699 |
Clone id |
YMU001_000116_E04 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_E04. |
Accession |
BP918699 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3906Contig1 |
Sequence |
AAAGGGGCCTGATGGGTATTCCCTAGATGCATGCGGTGCGTGTGATGTGTTATCTGGGGC CTATGAAAGAGGAAGAAAGTCCCCTTTGCTGAATGTGTCCTATGCTATTGGTGAGAGACC TTCTGAAGGCTGTGTAAGCAATGGTGGTGAAGGGTTGTGTGGAAGCGTTGATGAGTCAAA TCGGCAGAGCACATCCTCTTCAGACACTGGCTTTGAAAGAGGATCGAGTTCCATGTGGGA GAGAGATGTGTTTTCCATCACCAGTGATGGCAGCGAGGCCTTCACAGCAGTATGCCCAGA TGAGACGGAGCCGGGGCACAAATCTAAGCAGCGACTTTGGAAGCTGAGAGAGAGAATGAA TCCATCTCCTTATGGGAGTGTCCACATGGAAAATGGGATGTCCAGGTTCTACGAAGATAA TCGGGAAGTGGGGATGGCAGAGAATGACATGGTGAAACGTTTCTTCAGGAATAGGTCCAC TGCAGGACAAGATGTGCCAGACACAAGGAGGCAAATTTCTCAGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55GE6 |
Definition |
sp|Q55GE6|ROCO7_DICDI Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum |
Align length |
47 |
Score (bit) |
33.5 |
E-value |
0.63 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q08BU2 |
Definition |
tr|Q08BU2|Q08BU2_XENLA Putative uncharacterized protein OS=Xenopus laevis |
Align length |
106 |
Score (bit) |
35.4 |
E-value |
1.7 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918699|Adiantum capillus-veneris mRNA, clone: YMU001_000116_E04. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q08BU2|Q08BU2_XENLA Putative uncharacterized protein OS=Xenop... 35 1.7 tr|B8GHJ4|B8GHJ4_9EURY Major facilitator superfamily MFS_1 OS=Ca... 35 1.7 tr|A7P658|A7P658_VITVI Chromosome chr4 scaffold_6, whole genome ... 35 1.8 tr|A4T3L8|A4T3L8_MYCGI Putative outer membrane adhesin like prot... 34 3.9 tr|Q10QQ9|Q10QQ9_ORYSJ Os03g0187100 protein OS=Oryza sativa subs... 34 3.9 tr|A3AEX5|A3AEX5_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.9 tr|B8PIP2|B8PIP2_9APHY Predicted protein OS=Postia placenta Mad-... 34 5.1 tr|B4N5Z6|B4N5Z6_DROWI GK17836 OS=Drosophila willistoni GN=GK178... 34 5.2 tr|Q69363|Q69363_FHV1 Immediate early protein OS=Feline herpesvi... 33 6.6 tr|Q9VJK6|Q9VJK6_DROME Dachshund, isoform A OS=Drosophila melano... 33 6.6 tr|Q8IP21|Q8IP21_DROME Dachshund, isoform C OS=Drosophila melano... 33 6.6 tr|Q8IP20|Q8IP20_DROME Dachshund, isoform D OS=Drosophila melano... 33 6.6 tr|Q8IP19|Q8IP19_DROME Dachshund, isoform B OS=Drosophila melano... 33 6.6 tr|Q59DZ0|Q59DZ0_DROME Dachshund, isoform G OS=Drosophila melano... 33 6.6 tr|Q59DY9|Q59DY9_DROME Dachshund, isoform F OS=Drosophila melano... 33 6.6 tr|Q24031|Q24031_DROME Dachshund variant 3 OS=Drosophila melanog... 33 6.6 tr|Q24030|Q24030_DROME Dachshund OS=Drosophila melanogaster GN=d... 33 6.6 tr|Q24029|Q24029_DROME Dachshund variant 4 OS=Drosophila melanog... 33 6.6 tr|Q24028|Q24028_DROME Dachshund variant 1 OS=Drosophila melanog... 33 6.6 tr|Q24027|Q24027_DROME Dachshund variant 2 OS=Drosophila melanog... 33 6.6 tr|O49143|O49143_ARATH Polyprotein OS=Arabidopsis thaliana PE=4 ... 33 6.7 tr|O49142|O49142_ARATH Polyprotein OS=Arabidopsis thaliana PE=4 ... 33 6.7 tr|O49140|O49140_ARATH Polyprotein OS=Arabidopsis thaliana PE=4 ... 33 6.7 tr|Q2GUF3|Q2GUF3_CHAGB Putative uncharacterized protein OS=Chaet... 33 6.7 tr|B4I509|B4I509_DROSE GM17175 OS=Drosophila sechellia GN=GM1717... 33 8.6 tr|A8XSV3|A8XSV3_CAEBR CBR-SEL-2 protein OS=Caenorhabditis brigg... 33 8.6 tr|Q4X1V7|Q4X1V7_ASPFU 20S cyclosome subunit (BimA/Nuc2/Cdc27), ... 33 8.6 tr|B0XRR2|B0XRR2_ASPFC 20S cyclosome subunit (BimA/Nuc2/Cdc27), ... 33 8.6
>tr|Q08BU2|Q08BU2_XENLA Putative uncharacterized protein OS=Xenopus laevis PE=2 SV=1 Length = 2510
Score = 35.4 bits (80), Expect = 1.7 Identities = 31/106 (29%), Positives = 51/106 (48%) Frame = +2
Query: 116 RPSEGCVSNGGEGLCGSVDESNRQSTSSSDTGFERGSSSMWERDVFSITSDGSEAFTAVC 295 RPS+G +S G ++S + STSS+ SS E + + T++G+ + A Sbjct: 1625 RPSKGSMSKSPASGNGDSEKSEKNSTSSALENHVEESSK--EASLQASTTEGASSTDA-- 1680
Query: 296 PDETEPGHKSKQRLWKLRERMNPSPYGSVHMENGMSRFYEDNREVG 433 D+T P +K+R + ++ SP G +EN + E N E G Sbjct: 1681 -DKTTP---AKRRGRPSKHSLSHSPDGGKSVENNSTSAQEINMEEG 1722
>tr|B8GHJ4|B8GHJ4_9EURY Major facilitator superfamily MFS_1 OS=Candidatus Methanosphaerula palustris E1-9c GN=Mpal_1264 PE=4 SV=1 Length = 466
Score = 35.4 bits (80), Expect = 1.7 Identities = 23/93 (24%), Positives = 39/93 (41%) Frame = +3
Query: 183 GRAHPLQTLALKEDRVPCGREMCFPSPVMAARPSQQYAQMRRSRGTNLSSDFGS*ERE*I 362 G H L TL + + G +PS ++ R + A + G L Sbjct: 102 GSGHDLATLIISRVLIGVGTSTGYPSAMLLIRQRAESAGLTEPPGGVLGG---------- 151
Query: 363 HLLMGVSTWKMGCPGSTKIIGKWGWQRMTW*NV 461 ++ G++T +G P ++G WGWQ + + NV Sbjct: 152 LVIAGMATAVIGLPIGGFLVGAWGWQSVFFINV 184
>tr|A7P658|A7P658_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032790001 PE=4 SV=1 Length = 883
Score = 35.4 bits (80), Expect = 1.8 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = -1
Query: 402 DIPFSMWTLP*GDGFILSLSFQSRCLDLCPGSVSSGHTAVKASLPSLVMENTSLSHMELD 223 D PFS+++ P LSLS L LCP SV + + S VM+ + + L Sbjct: 48 DSPFSLYSNPIPT---LSLSISLCVLSLCPLSVIFFSLQLNSGFASRVMQQADQTVISLR 104
Query: 222 P--LSKPVSEEDVLCRFDSSTLPHNPSPPLLTQPSEGLSP 109 P P + RFDSS+ + + PL +P GL+P Sbjct: 105 PGGGGGPRGTRFLASRFDSSSSSSSDAQPL--RPHGGLAP 142
>tr|A4T3L8|A4T3L8_MYCGI Putative outer membrane adhesin like protein OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_0506 PE=3 SV=1 Length = 2816
Score = 34.3 bits (77), Expect = 3.9 Identities = 29/105 (27%), Positives = 45/105 (42%) Frame = +2
Query: 134 VSNGGEGLCGSVDESNRQSTSSSDTGFERGSSSMWERDVFSITSDGSEAFTAVCPDETEP 313 +++ G G GSV S+R+STS + +R SSS + + SD + T+ PD EP Sbjct: 30 LADEGAGSNGSVSSSSRESTSGATGTSDRESSSSPSKPAATRPSDSDDTETS-GPDGDEP 88
Query: 314 GHKSKQRLWKLRERMNPSPYGSVHMENGMSRFYEDNREVGMAEND 448 + E PS + E ED + +A+ D Sbjct: 89 NADGSE---PTEEDTEPSSTPATSPEPPADPVVEDTTDEALADPD 130
>tr|Q10QQ9|Q10QQ9_ORYSJ Os03g0187100 protein OS=Oryza sativa subsp. japonica GN=Os03g0187100 PE=4 SV=1 Length = 1178
Score = 34.3 bits (77), Expect = 3.9 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 14/79 (17%) Frame = +2
Query: 134 VSNGGEGLCGSVDESNRQSTS---SSDTGFERGS-----------SSMWERDVFSITSDG 271 V+N +G GS ES S S SSD+G + GS SS + D S + +G Sbjct: 399 VNNDSDGKAGSSSESGSGSDSDSESSDSGSDSGSQSRSAASGSGSSSDSDSDASSSSKEG 458
Query: 272 SEAFTAVCPDETEPGHKSK 328 S+AF + D+ + G K Sbjct: 459 SDAFVDITSDDDKGGAHRK 477
>tr|A3AEX5|A3AEX5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009347 PE=4 SV=1 Length = 1162
Score = 34.3 bits (77), Expect = 3.9 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 14/79 (17%) Frame = +2
Query: 134 VSNGGEGLCGSVDESNRQSTS---SSDTGFERGS-----------SSMWERDVFSITSDG 271 V+N +G GS ES S S SSD+G + GS SS + D S + +G Sbjct: 383 VNNDSDGKAGSSSESGSGSDSDSESSDSGSDSGSQSRSAASGSGSSSDSDSDASSSSKEG 442
Query: 272 SEAFTAVCPDETEPGHKSK 328 S+AF + D+ + G K Sbjct: 443 SDAFVDITSDDDKGGAHRK 461
>tr|B8PIP2|B8PIP2_9APHY Predicted protein OS=Postia placenta Mad-698-R GN=POSPLDRAFT_99956 PE=4 SV=1 Length = 868
Score = 33.9 bits (76), Expect = 5.1 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = +2
Query: 149 EGLCGSVDESNRQSTSSSDTGFERGSSSMWERDVFSITSD-GSEAFTAVCPDETEPGHKS 325 EG+C R+ GFE ++ +W +I + GS F A PDE H++ Sbjct: 450 EGVCAKSGARGRREAGEQGAGFEVMANVVWAEVGRAIMDELGSVVFAAGKPDEFRKHHET 509
Query: 326 KQRLWKLRERMNPS 367 Q + E + PS Sbjct: 510 TQAFTRALEFLAPS 523
>tr|B4N5Z6|B4N5Z6_DROWI GK17836 OS=Drosophila willistoni GN=GK17836 PE=4 SV=1 Length = 500
Score = 33.9 bits (76), Expect = 5.2 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%) Frame = -1
Query: 285 VKASLPSLVMENTSLSHMELDPLSKPVSEEDVLCRFDSSTL------PHNPSPPLLTQPS 124 V A+LP+L M+NT S M P KP S E ++ ++T + SPP LT PS Sbjct: 13 VGAALPALTMDNT--SKMVSKPFPKPFSIESLIAHQTTTTTAATTSSSASSSPPALTSPS 70
>tr|Q69363|Q69363_FHV1 Immediate early protein OS=Feline herpesvirus 1 PE=4 SV=1 Length = 1388
Score = 33.5 bits (75), Expect = 6.6 Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Frame = +2
Query: 17 YSLDACGACDVLS----GA--YERGRKSPLLNVSYAIGERPSEGCVSNGGEGLCGSVDES 178 +S + G CDV GA Y RGR+SP+ S + G P G S G Sbjct: 167 HSPSSVGVCDVTECDSLGARDYSRGRRSPISVGSMSPG--PRRGRRSRSG---------- 214
Query: 179 NRQSTSSSDTGFERGSSSMWERDVFSITSDGSEAFTAVCPD--ETEPGHKSKQR 334 S+SSS + GSSS R S +S S + + P E +PG S R Sbjct: 215 ---SSSSSSSSSSSGSSSTGSRSSSSSSSSTSRSPSPPAPPNRELKPGTPSPPR 265
>tr|Q9VJK6|Q9VJK6_DROME Dachshund, isoform A OS=Drosophila melanogaster GN=dac PE=2 SV=3 Length = 1072
Score = 33.5 bits (75), Expect = 6.6 Identities = 25/102 (24%), Positives = 42/102 (41%) Frame = +2
Query: 122 SEGCVSNGGEGLCGSVDESNRQSTSSSDTGFERGSSSMWERDVFSITSDGSEAFTAVCPD 301 SE C GG+ C + + +N + +S+ + +M E D S SD S A + C Sbjct: 846 SEACGGGGGDAKCNNNNNNNNNNNNSNSSSHGGDVETMKENDAGSEKSDKSLASNSSC-- 903
Query: 302 ETEPGHKSKQRLWKLRERMNPSPYGSVHMENGMSRFYEDNRE 427 + GH + + +N P H + S +E + E Sbjct: 904 DVTAGHSAGSVSGSISAGLN-CPDSPTHFKREPSSDHEGSVE 944
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