BP918705 |
Clone id |
YMU001_000116_E10 |
Library |
YMU01 |
Length |
491 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_E10. |
Accession |
BP918705 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGCAATTCTGATGCCCCTGTGCTGCAAAATTGGGCGATTTGAACGAGTCACGGATGCCAA AGCTCACCAGTGGTTAAGCGTTCTCTACAAGGATGATCGGTTTTCGGAGACCAGGATCAT GACGCATATTCGTGAGCTGGCTCTGGATGGTCTCGTGCAACTCGAGACAGATGGACACGG TGAAAGGATAGTAAGAGTGCACGACCTGTATTCTGACCTTGCGCACAGAGAAGCTGCAAC TAGATTCTTCATCAGTGGAAGATCAAACAAGCCAGTGGAAGAATTTGACTGGGAGAAGGT AGAAAGAGTCATCTTGAGGCCAGGCGAGCTAGTCAAAGCAATGAACGCGACTTGGCTTAT TGAGAAGCCACAGGAGCAAAAATGTCGAAAGCTTCGAGTTTTATATGCTGCTGGCGTAGA TTTTCTCAGGTCAGGGATTGATATGCGTCTCATGCCGTCCTTGCGCGTCTTGTATCTTAA CGACGTGACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9JMT1 |
Definition |
sp|Q9JMT1|YUAH_ECOLI Uncharacterized protein yuaH OS=Escherichia coli (strain K12) |
Align length |
101 |
Score (bit) |
32.7 |
E-value |
0.92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918705|Adiantum capillus-veneris mRNA, clone: YMU001_000116_E10. (491 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9JMT1|YUAH_ECOLI Uncharacterized protein yuaH OS=Escherichia... 33 0.92 sp|Q9V277|SPEE_PYRAB Probable spermidine synthase OS=Pyrococcus ... 32 1.2 sp|B0BMW8|FACE2_RAT CAAX prenyl protease 2 OS=Rattus norvegicus ... 32 1.6 sp|P57791|FACE2_MOUSE CAAX prenyl protease 2 OS=Mus musculus GN=... 32 1.6 sp|Q9Y256|FACE2_HUMAN CAAX prenyl protease 2 OS=Homo sapiens GN=... 32 1.6 sp|A6H7A0|FACE2_BOVIN CAAX prenyl protease 2 OS=Bos taurus GN=RC... 32 1.6 sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo s... 32 2.0 sp|A5GLY6|RECR_SYNPW Recombination protein recR OS=Synechococcus... 30 4.5 sp|Q8WV99|ZFN2B_HUMAN AN1-type zinc finger protein 2B OS=Homo sa... 30 5.9 sp|Q2JKY3|SYE_SYNJB Glutamyl-tRNA synthetase OS=Synechococcus sp... 30 7.8 sp|Q8CRU0|DNLJ_STAES DNA ligase OS=Staphylococcus epidermidis (s... 30 7.8 sp|Q5HN30|DNLJ_STAEQ DNA ligase OS=Staphylococcus epidermidis (s... 30 7.8
>sp|Q9JMT1|YUAH_ECOLI Uncharacterized protein yuaH OS=Escherichia coli (strain K12) GN=yuaH PE=4 SV=1 Length = 110
Score = 32.7 bits (73), Expect = 0.92 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Frame = +2
Query: 56 AKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGERIVRVHDLYS-DLAHRE 232 A A+ LY+ R +E M H R D + TD E + R+ +LY+ ++A R Sbjct: 4 ADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTDVTTEALQRISELYAIEVAVRG 63
Query: 233 AATRFFISGRSNKPV----EEFDWEKVE-RVILRPGELVKA 340 + ++ R +P +DW + + + + R + KA Sbjct: 64 CSAEQRLAARKARPAPLMQSLYDWIQTQMKTLARHSDTAKA 104
>sp|Q9V277|SPEE_PYRAB Probable spermidine synthase OS=Pyrococcus abyssi GN=speE PE=3 SV=1 Length = 279
Score = 32.3 bits (72), Expect = 1.2 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%) Frame = +2
Query: 131 RELALDGLVQLETDG-HGERIVRVHDLYSDLAHREAATRFFISGRSNKPVEE-FDWEKVE 304 R LALDG VQL T+G VH + LAH I G + E E+VE Sbjct: 41 RLLALDGTVQLVTEGEESYHESLVHPVM--LAHPNPRRVLVIGGGDGGTIREVLRHEEVE 98
Query: 305 RVILRPGE------LVKAMNAT-WLIEKPQEQKCRKLRVLYAAGVDFLR--SGIDMRLMP 457 I+ + +K + L++K + +C++ +++ GV+F++ SG D+ ++ Sbjct: 99 EAIMVEIDEEVIEVAIKFIGIDGGLLDKMMKGECKRAKLIIGDGVEFIKENSGFDVVIVD 158
Query: 458 S 460 S Sbjct: 159 S 159
>sp|B0BMW8|FACE2_RAT CAAX prenyl protease 2 OS=Rattus norvegicus GN=Rce1 PE=2 SV=1 Length = 308
Score = 32.0 bits (71), Expect = 1.6 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = -3
Query: 321 GLKMTLSTFSQSNSSTGLFDLPLMKNLVAASLCARSEYRSCTLTILSPC----PSVSSC 157 GLK+ L+ S + T D+ ++N V A L +R+C L +L+PC P+V +C Sbjct: 145 GLKVVLAPRSWARRLT---DMRWLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVFTC 200
>sp|P57791|FACE2_MOUSE CAAX prenyl protease 2 OS=Mus musculus GN=Rce1 PE=2 SV=1 Length = 329
Score = 32.0 bits (71), Expect = 1.6 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = -3
Query: 321 GLKMTLSTFSQSNSSTGLFDLPLMKNLVAASLCARSEYRSCTLTILSPC----PSVSSC 157 GLK+ L+ S + T D+ ++N V A L +R+C L +L+PC P+V +C Sbjct: 145 GLKVVLAPRSWARCLT---DMRWLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVFTC 200
>sp|Q9Y256|FACE2_HUMAN CAAX prenyl protease 2 OS=Homo sapiens GN=RCE1 PE=1 SV=1 Length = 329
Score = 32.0 bits (71), Expect = 1.6 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = -3
Query: 321 GLKMTLSTFSQSNSSTGLFDLPLMKNLVAASLCARSEYRSCTLTILSPC----PSVSSC 157 GLK+ L+ S + T D+ ++N V A L +R+C L +L+PC P+V +C Sbjct: 145 GLKVVLAPRSWARCLT---DMRWLRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTC 200
>sp|A6H7A0|FACE2_BOVIN CAAX prenyl protease 2 OS=Bos taurus GN=RCE1 PE=2 SV=1 Length = 308
Score = 32.0 bits (71), Expect = 1.6 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = -3
Query: 321 GLKMTLSTFSQSNSSTGLFDLPLMKNLVAASLCARSEYRSCTLTILSPC----PSVSSC 157 GLK+ L+ S + T D+ ++N V A L +R+C L +L+PC P+V +C Sbjct: 145 GLKVVLAPRSWARCLT---DMRWLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVFTC 200
>sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo sapiens GN=KRTAP10-11 PE=1 SV=1 Length = 298
Score = 31.6 bits (70), Expect = 2.0 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -3
Query: 249 KNLVAASLCARSEYRSCTLTILSPCPSVSSCTRPSRASSRIC 124 K + +C+R+ Y C P +SC RPS + S +C Sbjct: 200 KPICCVPVCSRASYSRCQQPSCQPACCTTSCCRPSSSVSLLC 241
>sp|A5GLY6|RECR_SYNPW Recombination protein recR OS=Synechococcus sp. (strain WH7803) GN=recR PE=3 SV=1 Length = 199
Score = 30.4 bits (67), Expect = 4.5 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -3
Query: 252 MKNLVAASLCARSEYRSC-TLTILSPCPSVSSCTRPSRASSRICVM 118 +++ A L AR+E C T LS P+ C P RA+ +ICV+ Sbjct: 41 IRSFADALLAARTEVGHCQTCHHLSAEPTCEICRNPERANGQICVV 86
>sp|Q8WV99|ZFN2B_HUMAN AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1 SV=1 Length = 257
Score = 30.0 bits (66), Expect = 5.9 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = -3
Query: 222 ARSEYRSCTLTILSPCPSVSSCTRPSRASSR 130 +R++ + T T+ SP ++ SCT PSRA++R Sbjct: 150 SRAQAVASTSTVPSPSQTMPSCTSPSRATTR 180
>sp|Q2JKY3|SYE_SYNJB Glutamyl-tRNA synthetase OS=Synechococcus sp. GN=gltX PE=3 SV=1 Length = 479
Score = 29.6 bits (65), Expect = 7.8 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Frame = +2
Query: 215 DLAHREAATRFFISGRSNKPVEEFDWEKVERV------ILRPGELVKAMNATW------L 358 +L E A F R N+ FDW+K+ + L P ELV+ + W L Sbjct: 282 ELFSLEKAAALFDFDRVNRAAARFDWDKLNWINSQYIKRLSPPELVERLTPFWQAAGFDL 341
Query: 359 IEKPQEQKCRKLRVLYAAGVDFL 427 E P + L A G+D L Sbjct: 342 SEVPDPTWLEDVARLIADGIDRL 364
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B2ANK7 |
Definition |
tr|B2ANK7|B2ANK7_PODAN Predicted CDS Pa_6_11160 OS=Podospora anserina |
Align length |
96 |
Score (bit) |
36.6 |
E-value |
0.64 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918705|Adiantum capillus-veneris mRNA, clone: YMU001_000116_E10. (491 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B2ANK7|B2ANK7_PODAN Predicted CDS Pa_6_11160 OS=Podospora ans... 37 0.64 tr|Q8A9T1|Q8A9T1_BACTN TonB-dependent receptor OS=Bacteroides th... 36 1.1 tr|Q72BG8|Q72BG8_DESVH Outer membrane lipoprotein carrier protei... 36 1.1 tr|A1VDC1|A1VDC1_DESVV Outer membrane lipoprotein carrier protei... 36 1.1 tr|Q2Z1M2|Q2Z1M2_ERWST Transposase-like protein OS=Erwinia stewa... 35 1.4 tr|A7UNJ9|A7UNJ9_9HYPO Putative ergot alkaloid biosynthetic prot... 35 1.4 tr|Q8VSD7|Q8VSD7_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=CP020... 35 1.9 tr|Q83JC7|Q83JC7_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=SF332... 35 1.9 tr|Q7UCC5|Q7UCC5_SHIFL ISSfl3 orfC OS=Shigella flexneri GN=S2184... 35 1.9 tr|Q8VSD2|Q8VSD2_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=CP021... 35 2.4 tr|Q81ZN9|Q81ZN9_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=SF086... 35 2.4 tr|Q81ZL3|Q81ZL3_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=SF037... 35 2.4 tr|Q0T6L4|Q0T6L4_SHIF8 ISSfl4 ORF3 OS=Shigella flexneri serotype... 35 2.4 tr|Q0T010|Q0T010_SHIF8 ISSfl4 ORF3 OS=Shigella flexneri serotype... 35 2.4 tr|Q0SYR1|Q0SYR1_SHIF8 ISSfl4 ORF3 OS=Shigella flexneri serotype... 35 2.4 tr|Q0SXP1|Q0SXP1_SHIF8 ISSfl4 ORF3 OS=Shigella flexneri serotype... 35 2.4 tr|B2TSR4|B2TSR4_SHIB3 Transposase family OS=Shigella boydii ser... 35 2.4 tr|Q99QK1|Q99QK1_SHIFL Putative IS orf OS=Shigella flexneri 5a G... 35 2.4 tr|Q7UDJ1|Q7UDJ1_SHIFL ISSfl3 orfD OS=Shigella flexneri GN=S0379... 35 2.4 tr|Q7UD60|Q7UD60_SHIFL ISSfl3 orfC,D OS=Shigella flexneri GN=S09... 35 2.4 tr|Q7UBD2|Q7UBD2_SHIFL ISSfl3 orfC OS=Shigella flexneri GN=S3549... 35 2.4 tr|Q7UAR4|Q7UAR4_SHIFL ISSfl3 orfD OS=Shigella flexneri GN=S4440... 35 2.4 tr|Q2TH59|Q2TH59_SHIFL ISSfl4 ORF4 OS=Shigella flexneri GN=SFLP1... 35 2.4 tr|Q1YSK2|Q1YSK2_9GAMM 4-oxalocrotonate decarboxylase OS=gamma p... 35 2.4 tr|B3WYZ8|B3WYZ8_SHIDY ISSfl4 ORF3 OS=Shigella dysenteriae 1012 ... 35 2.4 tr|B2U5X7|B2U5X7_ECOLX ISSfl4 ORF3 OS=Escherichia coli 53638 GN=... 35 2.4 tr|A7LX79|A7LX79_BACOV Putative uncharacterized protein OS=Bacte... 35 2.4 tr|A3KP08|A3KP08_DANRE Zgc:162825 protein OS=Danio rerio GN=zgc:... 34 3.2 tr|Q8VSI6|Q8VSI6_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=CP011... 34 3.2 tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella paten... 34 3.2
>tr|B2ANK7|B2ANK7_PODAN Predicted CDS Pa_6_11160 OS=Podospora anserina PE=4 SV=1 Length = 245
Score = 36.6 bits (83), Expect = 0.64 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Frame = +2
Query: 89 KDDRFSETRIMTHIRELALDGLVQLETDGHGERIVRVHDLYSDLAHREAATRFFISGRSN 268 K RF++ + +D L Q ++GHG + D+Y AA R F ++ Sbjct: 156 KQSRFTDANRKRIDDKFKVDLLYQCSSNGHGAVCRALADVY------HAAVRAFGGSGAS 209
Query: 269 KPVEEFDWEKV-ERVILRPGELVKAMNAT---WLIE 364 K EE DW K+ E + ELVK AT W +E Sbjct: 210 KREEEEDWVKIYEEKLAIYNELVKEAQATGELWTLE 245
>tr|Q8A9T1|Q8A9T1_BACTN TonB-dependent receptor OS=Bacteroides thetaiotaomicron GN=BT_0734 PE=3 SV=1 Length = 702
Score = 35.8 bits (81), Expect = 1.1 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = -3
Query: 336 LTSSPGLKMTLSTFSQSNSSTGLFDLPLMKNLVAA 232 L++ P LK TLS F Q+ + G+FDLP NL AA Sbjct: 596 LSTKPDLKFTLSGFYQNKAIQGIFDLPRSGNLDAA 630
>tr|Q72BG8|Q72BG8_DESVH Outer membrane lipoprotein carrier protein, putative OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=DVU_1668 PE=4 SV=1 Length = 225
Score = 35.8 bits (81), Expect = 1.1 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 20/142 (14%) Frame = +2
Query: 35 RFERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGERIVRV--HDL 208 R++ VT KA +L+++ +ETR T + L LV+ ET G ++ + D+ Sbjct: 35 RYDTVTTLKAAFTQKLLHRESGSTETRNGTLLFRKPL--LVRWETGGKNPEVLVISSQDI 92
Query: 209 YSDLAHREAATRF-------------FISGRSN-----KPVEEFDWEKVERVILRPGELV 334 ++ L E A R+ I+G++ VEE E + R+ L P E V Sbjct: 93 WNFLPDEELAYRYPLDLVQDSKSIIKVITGQAKLDQDFNVVEEGQEEGLTRLHLYPKEPV 152
Query: 335 KAMNATWLIEKPQEQKCRKLRV 400 + + L PQE R++RV Sbjct: 153 QQLTEAILWVDPQEHLIRRVRV 174
>tr|A1VDC1|A1VDC1_DESVV Outer membrane lipoprotein carrier protein LolA OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=Dvul_1419 PE=3 SV=1 Length = 225
Score = 35.8 bits (81), Expect = 1.1 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 20/142 (14%) Frame = +2
Query: 35 RFERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGERIVRV--HDL 208 R++ VT KA +L+++ +ETR T + L LV+ ET G ++ + D+ Sbjct: 35 RYDTVTTLKAAFTQKLLHRESGSTETRNGTLLFRKPL--LVRWETGGKNPEVLVISSQDI 92
Query: 209 YSDLAHREAATRF-------------FISGRSN-----KPVEEFDWEKVERVILRPGELV 334 ++ L E A R+ I+G++ VEE E + R+ L P E V Sbjct: 93 WNFLPDEELAYRYPLDLVQDSKSIIKVITGQAKLDQDFNVVEEGQEEGLTRLHLYPKEPV 152
Query: 335 KAMNATWLIEKPQEQKCRKLRV 400 + + L PQE R++RV Sbjct: 153 QQLTEAILWVDPQEHLIRRVRV 174
>tr|Q2Z1M2|Q2Z1M2_ERWST Transposase-like protein OS=Erwinia stewartii PE=4 SV=1 Length = 523
Score = 35.4 bits (80), Expect = 1.4 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Frame = +2
Query: 38 FERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGERIVRVHDLY-- 211 + + A A+ + LY+D R +E M H R D + TD E + R+ LY Sbjct: 315 YSGILQADAYGGYNALYEDGRITEAACMAHARRKIHDVHARTPTDITTEALKRIGKLYAI 374
Query: 212 -SDLAHREAATRFFISGRSNKPVEE--FDWEKVE-RVILRPGELVKA 340 +++ A R + P+ + +DW +V+ +V+ R + KA Sbjct: 375 EAEIRGSPADERLAVRKEQTIPLMQSLYDWIQVQMKVLSRHSDTAKA 421
>tr|A7UNJ9|A7UNJ9_9HYPO Putative ergot alkaloid biosynthetic protein A OS=Clavicipitaceae sp. US2005a PE=4 SV=1 Length = 289
Score = 35.4 bits (80), Expect = 1.4 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Frame = +2
Query: 161 LETDGHGERIVRVHDLYSDLAHREAATRFFISGRSNKPV-----EEFDW--EKVERVILR 319 L T G+G+ + L EA F I RSN P FDW E IL Sbjct: 4 LLTGGNGKTARHIAGLLE-----EANLPFIIGSRSNSPQTIERHRSFDWLDETTFHNILS 58
Query: 320 PGELVKAMNATWLIEKP 370 PGE ++ ++A WL+ P Sbjct: 59 PGEGMRPISAVWLVPSP 75
>tr|Q8VSD7|Q8VSD7_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=CP0204 PE=4 SV=1 Length = 533
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = +2
Query: 29 IGRFERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGE---RIVRV 199 + +++ V A A+ +VLY+ R E + H R D V+ T+ E RI + Sbjct: 323 LAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKTHDEDVRRPTEMTQEALRRIAEL 382
Query: 200 HDLYSDLAHREAATRFFI-SGRSNKPVEE-FDWEKVERVIL-RPGELVKAMN 346 +D+ +++ A R + RS + ++ +DW +++R L + E+ KA + Sbjct: 383 YDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFD 434
>tr|Q83JC7|Q83JC7_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=SF3324 PE=4 SV=1 Length = 533
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = +2
Query: 29 IGRFERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGE---RIVRV 199 + +++ V A A+ +VLY+ R E + H R D V+ T+ E RI + Sbjct: 323 LAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKTHDEDVRRPTEMTQEALRRIAEL 382
Query: 200 HDLYSDLAHREAATRFFI-SGRSNKPVEE-FDWEKVERVIL-RPGELVKAMN 346 +D+ +++ A R + RS + ++ +DW +++R L + E+ KA + Sbjct: 383 YDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFD 434
>tr|Q7UCC5|Q7UCC5_SHIFL ISSfl3 orfC OS=Shigella flexneri GN=S2184 PE=4 SV=1 Length = 533
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = +2
Query: 29 IGRFERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGE---RIVRV 199 + +++ V A A+ +VLY+ R E + H R D V+ T+ E RI + Sbjct: 323 LAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKTHDEDVRRPTEMTQEALRRIAEL 382
Query: 200 HDLYSDLAHREAATRFFI-SGRSNKPVEE-FDWEKVERVIL-RPGELVKAMN 346 +D+ +++ A R + RS + ++ +DW +++R L + E+ KA + Sbjct: 383 YDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFD 434
>tr|Q8VSD2|Q8VSD2_SHIFL ISSfl4 ORF3 OS=Shigella flexneri GN=CP0213 PE=4 SV=1 Length = 533
Score = 34.7 bits (78), Expect = 2.4 Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = +2
Query: 29 IGRFERVTDAKAHQWLSVLYKDDRFSETRIMTHIRELALDGLVQLETDGHGE---RIVRV 199 + +++ V A A+ +VLY+ R E + H R D V+ T+ E RI + Sbjct: 323 LAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKIHDEDVRRPTEMTQEALRRIAEL 382
Query: 200 HDLYSDLAHREAATRFFI-SGRSNKPVEE-FDWEKVERVIL-RPGELVKAMN 346 +D+ +++ A R + RS + ++ +DW +++R L + E+ KA + Sbjct: 383 YDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFD 434
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