| BP918714 |
| Clone id |
YMU001_000116_F08 |
| Library |
YMU01 |
| Length |
505 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_F08. |
| Accession |
BP918714 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
AAGTGGAAGAATTCGCGGCCGCAATTAGATATACCCTTGATCTCATTTTGTGAATTGGAG
ACACAGTCCACAGTAGAGCTGAGTGGTGAAGATAATTTTTGTTAAACATTATAGATGCAG
ACACAGTGCCCATGGTCCAGCTATCAAAAGCTGAAGAAGATGCACTGAAAGAAAAGATCA
CACAAGAGGTGTAGAGCAGTGGAAGGCCGTGATGGATTGTGAGTTGAGAGTTCTTCACTC
CGTCAACGTCACTCAACTCACTCCCAATCAGATCAAGGCGCAATGGCACCAACAGTCCTT
ACCATACCCCTTGATAAAGGTGGAGTTACTCCAAGTAAAAGAAAGGTTGTACGCATACAT
GCAAACAGATGGCGCAGATAAAGACCACCCAAAGTGGAGGTTGAGTTGGTTGAATAAGAA
TCCAAGGTATTTGATTCTGTTCACAAGAGCACCTACAACCCTGCAAAGAGATCCCACTTT
CTGTCATGTACCAAGAGTGAGGACT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q870W0 |
| Definition |
sp|Q870W0|SC61A_NEUCR Protein transport protein SEC61 subunit alpha OS=Neurospora crassa |
| Align length |
58 |
| Score (bit) |
32.7 |
| E-value |
0.85 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918714|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_F08.
(478 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q870W0|SC61A_NEUCR Protein transport protein SEC61 subunit al... 33 0.85
sp|Q5W4S4|FNIP1_CHICK Folliculin-interacting protein 1 OS=Gallus... 33 0.87
sp|Q7KVA1|XYLT_DROME Xylosyltransferase oxt OS=Drosophila melano... 32 1.9
sp|Q148G8|CK083_BOVIN UPF0723 protein C11orf83 homolog OS=Bos ta... 32 1.9
sp|O34448|YOPQ_BACSU SPBc2 prophage-derived uncharacterized prot... 31 2.5
sp|Q8TF40|FNIP1_HUMAN Folliculin-interacting protein 1 OS=Homo s... 31 2.5
sp|Q68FD7|FNIP1_MOUSE Folliculin-interacting protein 1 OS=Mus mu... 31 3.3
sp|Q5R8G5|MFSD1_PONAB Major facilitator superfamily domain-conta... 30 4.3
sp|Q9H3U5|MFSD1_HUMAN Major facilitator superfamily domain-conta... 30 4.3
sp|P78979|SC61A_YARLI Protein transport protein SEC61 subunit al... 30 5.5
sp|Q1JQC1|MFSD1_BOVIN Major facilitator superfamily domain-conta... 30 5.6
sp|Q1QY92|SYE_CHRSD Glutamyl-tRNA synthetase OS=Chromohalobacter... 30 7.4
>sp|Q870W0|SC61A_NEUCR Protein transport protein SEC61 subunit alpha
OS=Neurospora crassa GN=sec-61 PE=3 SV=1
Length = 476
Score = 32.7 bits (73), Expect = 0.85
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 443 LFAGL*VLL*TESNTLDSYSTNSTSTLGGLY-LRHLFACMRTTFLLLGVTPPLSRGMV 273
++ GL +L+ + + Y S+ T LY LR + A R T + LG+TP +S GMV
Sbjct: 34 MWTGLTLLIFLVMSQMPLYGIVSSDTSDPLYWLRMMMASNRGTLMELGITPIISSGMV 91
>sp|Q5W4S4|FNIP1_CHICK Folliculin-interacting protein 1 OS=Gallus
gallus GN=FNIP1 PE=3 SV=1
Length = 1157
Score = 32.7 bits (73), Expect = 0.87
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 VESSSLRQRHSTHSQSDQGAMAP-TVLTIPLDKGGVTPSKRKVVRIHANR 342
+ S L++ H + D+ + P TV+T L+KG V S+ +V +H NR
Sbjct: 532 IRCSELQETHLLENGEDEAIVMPGTVITTTLEKGEVEESEYVLVTMHKNR 581
>sp|Q7KVA1|XYLT_DROME Xylosyltransferase oxt OS=Drosophila
melanogaster GN=oxt PE=2 SV=1
Length = 876
Score = 31.6 bits (70), Expect = 1.9
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Frame = +2
Query: 116 IKS*RRCTERKDHTRGVEQWKAVMDCELRVLHSVNVTQLTPNQIKAQ-W------HQQSL 274
+++ + CT D+ V WK C+ + H V+ +PN K + W Q+SL
Sbjct: 459 LRNTKHCTSYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFKPEDWPRLQATEQKSL 518
Query: 275 PY-----PLI-KVELLQVKERLYAYMQTDGADKDHPKWR 373
+ P+I + LLQ++E LY ++ A+ H W+
Sbjct: 519 FFARKFEPVINQAVLLQLEEWLYGPYTSEYANL-HGYWQ 556
>sp|Q148G8|CK083_BOVIN UPF0723 protein C11orf83 homolog OS=Bos
taurus PE=3 SV=1
Length = 95
Score = 31.6 bits (70), Expect = 1.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 LTPNQIKAQWHQQSLP--YPLIKVELLQVKERLYAYMQTDGADKDHPKWRLSWLN 388
+TP + + Q + +P YP + E + KE L A +Q A +++ WR +W++
Sbjct: 28 VTPGEERKQAMLKEMPEQYPQRRDEAARTKELLLATLQEAAATQENVAWRKNWMS 82
>sp|O34448|YOPQ_BACSU SPBc2 prophage-derived uncharacterized protein
yopQ OS=Bacillus subtilis GN=yopQ PE=4 SV=1
Length = 460
Score = 31.2 bits (69), Expect = 2.5
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +2
Query: 215 VNVTQLTPNQIKAQWHQQSLPYPLIKVELLQVKERLYA-----YMQTDGADKDHPKWRLS 379
V++ T + + + QQ+ P+ K ++ ++ + +Y+ ++Q + D+ K
Sbjct: 257 VDIYNYTQKRAREHFGQQNTINPVKKSKVAEMSQNVYSNKIVKFIQDNSIIGDYIKTNGD 316
Query: 380 WLNKNPRYLILFTRAPTTLQR 442
W+N+N LI F+ ++R
Sbjct: 317 WINQNQNLLITFSDFKKAIER 337
>sp|Q8TF40|FNIP1_HUMAN Folliculin-interacting protein 1 OS=Homo
sapiens GN=FNIP1 PE=1 SV=2
Length = 1166
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 VESSSLRQRHSTHSQSDQGAMAP-TVLTIPLDKGGVTPSKRKVVRIHANR 342
+ S L++ H + D+ + P TV+T L+KG + S+ +V +H N+
Sbjct: 543 IRCSELQETHLLENGEDEAIVMPGTVITTTLEKGEIEESEYVLVTMHRNK 592
>sp|Q68FD7|FNIP1_MOUSE Folliculin-interacting protein 1 OS=Mus
musculus GN=Fnip1 PE=2 SV=1
Length = 1165
Score = 30.8 bits (68), Expect = 3.3
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 VESSSLRQRHSTHSQSDQGAMAP-TVLTIPLDKGGVTPSKRKVVRIHANR 342
+ S L++ H + D+ + P TV+T L+KG + S+ ++ +H N+
Sbjct: 543 IRCSELQETHLLENGEDEAIVMPGTVITTTLEKGEIEESEYVLITMHRNK 592
>sp|Q5R8G5|MFSD1_PONAB Major facilitator superfamily
domain-containing protein 1 OS=Pongo abelii GN=MFSD1
PE=2 SV=1
Length = 465
Score = 30.4 bits (67), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 370 PLWVVFICAICLHVCVQPFFYL 305
PLW++FI +C +V V PF L
Sbjct: 265 PLWLIFIICVCYYVAVFPFIGL 286
>sp|Q9H3U5|MFSD1_HUMAN Major facilitator superfamily
domain-containing protein 1 OS=Homo sapiens GN=MFSD1
PE=2 SV=2
Length = 465
Score = 30.4 bits (67), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 370 PLWVVFICAICLHVCVQPFFYL 305
PLW++FI +C +V V PF L
Sbjct: 265 PLWLIFIICVCYYVAVFPFIGL 286
>sp|P78979|SC61A_YARLI Protein transport protein SEC61 subunit alpha
OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2
Length = 471
Score = 30.0 bits (66), Expect = 5.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 389 YSTNSTSTLGGLY-LRHLFACMRTTFLLLGVTPPLSRGMV 273
Y NS+ LY LR + A R + + LG+TP +S GMV
Sbjct: 52 YGINSSDKSDALYWLRMMLASNRGSLMELGITPIVSSGMV 91
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A6NID9 |
| Definition |
tr|A6NID9|A6NID9_HUMAN Putative uncharacterized protein MFSD1 OS=Homo sapiens |
| Align length |
32 |
| Score (bit) |
36.2 |
| E-value |
0.83 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918714|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_F08.
(478 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A6NID9|A6NID9_HUMAN Putative uncharacterized protein MFSD1 OS... 36 0.83
tr|Q9VMD9|Q9VMD9_DROME Tiggrin OS=Drosophila melanogaster GN=Tig... 34 3.2
tr|Q23984|Q23984_DROME Tiggrin OS=Drosophila melanogaster GN=Tig... 34 3.2
tr|B4Q4M6|B4Q4M6_DROSI GD22579 OS=Drosophila simulans GN=GD22579... 34 3.2
tr|B4P0E2|B4P0E2_DROYA GE18445 OS=Drosophila yakuba GN=GE18445 P... 34 3.2
tr|B4I1V4|B4I1V4_DROSE GM17942 OS=Drosophila sechellia GN=GM1794... 34 3.2
tr|B3N5J2|B3N5J2_DROER GG23626 OS=Drosophila erecta GN=GG23626 P... 34 3.2
tr|B6NTG1|B6NTG1_BRAFL Putative uncharacterized protein OS=Branc... 34 4.1
tr|Q13YT1|Q13YT1_BURXL Major facilitator superfamily (MFS)nitrat... 33 7.0
tr|B2T482|B2T482_BURPP Major facilitator superfamily MFS_1 OS=Bu... 33 7.0
tr|Q5AVF9|Q5AVF9_EMENI Putative uncharacterized protein OS=Emeri... 33 9.2
tr|Q4WUE1|Q4WUE1_ASPFU Protein transport protein Sec61 alpha sub... 33 9.2
tr|Q2U7R7|Q2U7R7_ASPOR Transport protein Sec61 OS=Aspergillus or... 33 9.2
tr|Q2GWS9|Q2GWS9_CHAGB Protein transport protein SEC61 alpha sub... 33 9.2
tr|Q1DU22|Q1DU22_COCIM Protein transport protein SEC61 alpha sub... 33 9.2
tr|B8NEJ4|B8NEJ4_ASPFL Protein transport protein Sec61 alpha sub... 33 9.2
tr|B8M9V6|B8M9V6_9EURO Protein transport protein Sec61 alpha sub... 33 9.2
tr|B6QFZ5|B6QFZ5_PENMA Protein transport protein Sec61 alpha sub... 33 9.2
tr|B2B624|B2B624_PODAN Predicted CDS Pa_2_6490 OS=Podospora anse... 33 9.2
tr|B0Y3W5|B0Y3W5_ASPFC Protein transport protein Sec61 alpha sub... 33 9.2
tr|A7E5Q2|A7E5Q2_SCLS1 Protein transport protein SEC61 alpha sub... 33 9.2
tr|A6S136|A6S136_BOTFB Putative uncharacterized protein OS=Botry... 33 9.2
tr|A6R041|A6R041_AJECN Protein transport protein SEC61 alpha sub... 33 9.2
tr|A4QU63|A4QU63_MAGGR Protein transport protein SEC61 alpha sub... 33 9.2
tr|A2QGS6|A2QGS6_ASPNC Contig An03c0120, complete genome OS=Aspe... 33 9.2
tr|A1DF19|A1DF19_NEOFI Protein transport protein Sec61 alpha sub... 33 9.2
tr|A1CAP3|A1CAP3_ASPCL Protein transport protein Sec61 alpha sub... 33 9.2
>tr|A6NID9|A6NID9_HUMAN Putative uncharacterized protein MFSD1
OS=Homo sapiens GN=MFSD1 PE=4 SV=1
Length = 464
Score = 36.2 bits (82), Expect = 0.83
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 370 PLWVVFICAICLHVCVQPFFYLE*LHLYQGVW 275
PLW++FI +C +V V PF L LY+ +W
Sbjct: 265 PLWLIFIICVCYYVAVFPFIGLGKSFLYREIW 296
>tr|Q9VMD9|Q9VMD9_DROME Tiggrin OS=Drosophila melanogaster GN=Tig PE=1
SV=2
Length = 2188
Score = 34.3 bits (77), Expect = 3.2
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Frame = +2
Query: 164 VEQWKAVMDCELRVLHSVNVTQLTPNQIKAQWH--------QQSLPYPLIKVELLQVKER 319
+E+W LR V L+ Q++ Q QQ +PY ++ EL Q R
Sbjct: 1341 IEEWLRQQLINLRTTGQAKVENLSKWQVEEQQRLIEMLLKKQQEMPYEQVERELTQDHAR 1400
Query: 320 LYAYMQTDGADKDHPKWRLSWLNKNPRYL 406
L + QT D DH WL + R L
Sbjct: 1401 LQSLSQTHHVDIDHVD---HWLREELRRL 1426
>tr|Q23984|Q23984_DROME Tiggrin OS=Drosophila melanogaster GN=Tig PE=2
SV=1
Length = 2186
Score = 34.3 bits (77), Expect = 3.2
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Frame = +2
Query: 164 VEQWKAVMDCELRVLHSVNVTQLTPNQIKAQWH--------QQSLPYPLIKVELLQVKER 319
+E+W LR V L+ Q++ Q QQ +PY ++ EL Q R
Sbjct: 1341 IEEWLRQQLINLRTTGQAKVENLSKWQVEEQQRLIEMLLKKQQEMPYEQVERELTQDHAR 1400
Query: 320 LYAYMQTDGADKDHPKWRLSWLNKNPRYL 406
L + QT D DH WL + R L
Sbjct: 1401 LQSLSQTHHVDIDHVD---HWLREELRRL 1426
>tr|B4Q4M6|B4Q4M6_DROSI GD22579 OS=Drosophila simulans GN=GD22579 PE=4
SV=1
Length = 2190
Score = 34.3 bits (77), Expect = 3.2
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Frame = +2
Query: 164 VEQWKAVMDCELRVLHSVNVTQLTPNQIKAQWH--------QQSLPYPLIKVELLQVKER 319
+E+W LR V L+ Q++ Q QQ +PY ++ EL Q R
Sbjct: 1343 IEEWLRQQLINLRTTGQAKVENLSKWQVEEQQRLIEMLLKKQQEMPYEQVERELTQDHAR 1402
Query: 320 LYAYMQTDGADKDHPKWRLSWLNKNPRYL 406
L + QT D DH WL + R L
Sbjct: 1403 LQSLSQTHHVDIDHVD---HWLREELRRL 1428
>tr|B4P0E2|B4P0E2_DROYA GE18445 OS=Drosophila yakuba GN=GE18445 PE=4
SV=1
Length = 2187
Score = 34.3 bits (77), Expect = 3.2
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Frame = +2
Query: 164 VEQWKAVMDCELRVLHSVNVTQLTPNQIKAQWH--------QQSLPYPLIKVELLQVKER 319
+E+W LR V L+ Q++ Q QQ +PY ++ EL Q R
Sbjct: 1344 IEEWLRQQLINLRTTGQAKVEHLSKWQVEEQQRLIEMLLKKQQEMPYEQVERELTQDHAR 1403
Query: 320 LYAYMQTDGADKDHPKWRLSWLNKNPRYL 406
L + QT D DH WL + R L
Sbjct: 1404 LQSLSQTHHVDIDHVD---HWLREELRRL 1429
>tr|B4I1V4|B4I1V4_DROSE GM17942 OS=Drosophila sechellia GN=GM17942
PE=4 SV=1
Length = 2179
Score = 34.3 bits (77), Expect = 3.2
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Frame = +2
Query: 164 VEQWKAVMDCELRVLHSVNVTQLTPNQIKAQWH--------QQSLPYPLIKVELLQVKER 319
+E+W LR V L+ Q++ Q QQ +PY ++ EL Q R
Sbjct: 1343 IEEWLRQQLINLRTTGQAKVENLSKWQVEEQQRLIEMLLKKQQEMPYEQVERELTQDHAR 1402
Query: 320 LYAYMQTDGADKDHPKWRLSWLNKNPRYL 406
L + QT D DH WL + R L
Sbjct: 1403 LQSLSQTHHVDIDHVD---HWLREELRRL 1428
>tr|B3N5J2|B3N5J2_DROER GG23626 OS=Drosophila erecta GN=GG23626 PE=4
SV=1
Length = 2180
Score = 34.3 bits (77), Expect = 3.2
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Frame = +2
Query: 164 VEQWKAVMDCELRVLHSVNVTQLTPNQIKAQWH--------QQSLPYPLIKVELLQVKER 319
+E+W LR V L+ Q++ Q QQ +PY ++ EL Q R
Sbjct: 1334 IEEWLRQQLINLRTTGQAKVENLSKWQVEEQQRLIEMLLKKQQEMPYEQVERELTQDHAR 1393
Query: 320 LYAYMQTDGADKDHPKWRLSWLNKNPRYL 406
L + QT D DH WL + R L
Sbjct: 1394 LQSLSQTHHVDIDHVD---HWLREELRRL 1419
>tr|B6NTG1|B6NTG1_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_128833 PE=4 SV=1
Length = 423
Score = 33.9 bits (76), Expect = 4.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = -1
Query: 445 ISLQGCRCSCEQNQIPWILIQPTQPPLWVVFICAICLHVCVQ------PFFYLE*LHLYQ 284
I LQGC + +PW + T PP++ + +C +CL V P +Y+ H+
Sbjct: 134 IFLQGCSEPKVRPPVPWKRLL-TSPPVYSIVLCQVCLKVATHLMLIYAPLYYVHSFHIDA 192
Query: 283 GVW*GLLVPL 254
+ G+LV L
Sbjct: 193 NLT-GILVGL 201
>tr|Q13YT1|Q13YT1_BURXL Major facilitator superfamily
(MFS)nitrate/nitrite transporter, NarK/NasA family
OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_A2220
PE=4 SV=1
Length = 455
Score = 33.1 bits (74), Expect = 7.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -2
Query: 396 GFLFNQLNLHFGWSLSA----PSVCMYAYNLSFTWSNSTFIK 283
GFLF QL H+GW ++A P + + A L F W+N + +K
Sbjct: 156 GFLFPQLATHYGWQMAAGGALPLLAIAAITLYF-WANDSGVK 196
>tr|B2T482|B2T482_BURPP Major facilitator superfamily MFS_1
OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
GN=Bphyt_1986 PE=4 SV=1
Length = 455
Score = 33.1 bits (74), Expect = 7.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -2
Query: 396 GFLFNQLNLHFGWSLSA----PSVCMYAYNLSFTWSNSTFIK 283
GFLF QL H+GW ++A P + + A L F W+N + +K
Sbjct: 156 GFLFPQLATHYGWQMAAGGALPLLAIAAITLYF-WANDSGVK 196
|