BP918720 [AcEST]

BP918720
Clone id	YMU001_000116_G02
Library	YMU01
Length	472
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000116_G02.
Accession	BP918720
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2558Contig1
Sequence	CGAGGATATGCTTGGAAATCACCAATGCCAAGGCACCTGATTAGCTTTAGAAAGTAGAGA TGGTAAGGGTTTACCATAGAGACAGACAACTTTATTCTGCAGAGAGAAGCGTGTAAACTT AAAGAAAATATTACAAAAGAGACTAGGAGCTTAACTGGAAATACCTTAGTGCTAACGTCG AATAACATTGATGATAGAAACAATTAGAGAAAGAGTGATTGGATTGTAAGAAGTTCAAGA CAATATCCAATTACCGAGACTGAGTGGAGAAAGGATACTTTAGACGGAAAGATGGAAACT TCTACAGACCTAGCAGAGATTGAGACAATAGAGATTGAGACAATAACAGAACACCCGTTC TGGTTGAAAGGTAGTTGGGAGGAGAGAGATGGGATATTAGAACCTACAGATGGAGAAATC ATTGCAGACTGCTTACTCAGAGTAATAGCACTTGATTCTGGAGCCATTTACT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P28658
Definition	sp\|P28658\|ATX10_MOUSE Ataxin-10 OS=Mus musculus
Align length	61
Score (bit)	30.8
E-value	3.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918720\|Adiantum capillus-veneris mRNA, clone: YMU001_000116_G02. (472 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P28658\|ATX10_MOUSE Ataxin-10 OS=Mus musculus GN=Atxn10 PE=1 SV=2 31 3.2 sp\|Q9ER24\|ATX10_RAT Ataxin-10 OS=Rattus norvegicus GN=Atxn10 PE=... 30 4.2 >sp\|P28658\|ATX10_MOUSE Ataxin-10 OS=Mus musculus GN=Atxn10 PE=1 SV=2 Length = 475 Score = 30.8 bits (68), Expect = 3.2 Identities = 24/61 (39%), Positives = 31/61 (50%) Frame = +1 Query: 115 KLKENITKETRSLTGNTLVLTSNNIDDRNNRKSDWIVRSSRQYPITETEWRKDTLDGKM 294 K KEN K L G L+L S+NIDD NN W+V + R +TE + + KM Sbjct: 384 KNKENQDK-VNELDGIPLILDSSNIDD-NNPFMMQWVVYAVRN--LTEDNSQNQDVIAKM 439 Query: 295 E 297 E Sbjct: 440 E 440 >sp\|Q9ER24\|ATX10_RAT Ataxin-10 OS=Rattus norvegicus GN=Atxn10 PE=2 SV=1 Length = 475 Score = 30.4 bits (67), Expect = 4.2 Identities = 24/61 (39%), Positives = 30/61 (49%) Frame = +1 Query: 115 KLKENITKETRSLTGNTLVLTSNNIDDRNNRKSDWIVRSSRQYPITETEWRKDTLDGKM 294 K KEN K L G L+L S+NIDD NN W+V + R +TE + KM Sbjct: 384 KNKENQDK-VNELDGIPLILDSSNIDD-NNPFMMQWVVYAVRN--LTEDNSQNQDFIAKM 439 Query: 295 E 297 E Sbjct: 440 E 440
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q3TKP3
Definition	tr\|Q3TKP3\|Q3TKP3_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length	61
Score (bit)	33.1
E-value	7.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918720\|Adiantum capillus-veneris mRNA, clone: YMU001_000116_G02. (472 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q3TKP3\|Q3TKP3_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.1 >tr\|Q3TKP3\|Q3TKP3_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Atxn10 PE=2 SV=1 Length = 475 Score = 33.1 bits (74), Expect = 7.1 Identities = 25/61 (40%), Positives = 32/61 (52%) Frame = +1 Query: 115 KLKENITKETRSLTGNTLVLTSNNIDDRNN*RKSDWIVRSSRQYPITETEWRKDTLDGKM 294 K KEN K L G TL+L S+NIDD NN W+V + R +TE + + KM Sbjct: 384 KNKENQDK-VNELDGITLILDSSNIDD-NNPFMMQWVVYAVRN--LTEDNSQNQDVIAKM 439 Query: 295 E 297 E Sbjct: 440 E 440