BP918721 |
Clone id |
YMU001_000116_G03 |
Library |
YMU01 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_G03. |
Accession |
BP918721 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAACAGCTTGACACCAAGGCAGAAGTCGCAGTAAGAGATGACGGAGATCGCAATAGACAC GATCGACACGATGATGGAGATCGGGGTAGACATGAGAGACATATGAAAGACAAAGAGATC ATCACAGAGAGGATGAAATTTTATAATAGAAGGGATTGTAGCCACAAGGATGCAATCATT GAAGGACTTATAGACAGCATGATGATCGTAGGGATGTTGGCAGTGACGACAATGATGAAC GTAGAGACTGCCATGTTGGGTGTTATAGGCTTGGACACTCCAAGTGAGAAATCAATAGCA ACACACGAATAGAAACTGCAACAACTGAACTAAACTTGAATAGCGAGAGAGGGGGAAGAG AGAGTCAACACGAAGCGGAGTAGTTCCGCTTCCAGATGCATTGGCCTCAAAGACTGGTGC CCCTTTCGGTATCTCTTTCTTGATTAGAAATCAAGAAGGTACAATTCCTGAGGGTCCAAC TCTTTGCAACTACGCCCAGATTCTCTACAGGAGAGTGGGCCCTAAGGCTCCTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GSM2 |
Definition |
sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare |
Align length |
55 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9UXI9 |
Definition |
tr|A9UXI9|A9UXI9_MONBE Predicted protein OS=Monosiga brevicollis |
Align length |
74 |
Score (bit) |
37.4 |
E-value |
0.49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918721|Adiantum capillus-veneris mRNA, clone: YMU001_000116_G03. (534 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9UXI9|A9UXI9_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.49 tr|B0XJ76|B0XJ76_CULQU Putative uncharacterized protein (Fragmen... 37 0.83 tr|Q6K9R3|Q6K9R3_ORYSJ Os02g0819100 protein OS=Oryza sativa subs... 36 1.4 tr|B8AEW3|B8AEW3_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.4 tr|A3ACQ7|A3ACQ7_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.4 tr|Q9S074|Q9S074_BORBU Putative uncharacterized protein OS=Borre... 35 1.9 tr|Q5XYN6|Q5XYN6_BORGA Putative uncharacterized protein OS=Borre... 35 1.9 tr|Q66Z56|Q66Z56_BORBU Putative uncharacterized protein (Fragmen... 35 1.9 tr|B8EH67|B8EH67_BORBU Putative uncharacterized protein OS=Borre... 35 1.9 tr|B8EH04|B8EH04_BORBU Putative uncharacterized protein OS=Borre... 35 1.9 tr|B7J2Z7|B7J2Z7_BORBU Putative uncharacterized protein OS=Borre... 35 1.9 tr|B7J023|B7J023_BORBU Putative uncharacterized protein OS=Borre... 35 1.9 tr|B2AA09|B2AA09_PODAN Predicted CDS Pa_1_2440 OS=Podospora anse... 35 1.9 tr|Q66Z63|Q66Z63_BORBU Putative uncharacterized protein (Fragmen... 35 2.5 tr|Q66Z60|Q66Z60_BORBU Putative uncharacterized protein (Fragmen... 35 2.5 tr|Q66Z46|Q66Z46_BORBU Putative uncharacterized protein (Fragmen... 35 2.5 tr|B8EGJ1|B8EGJ1_BORBU Putative uncharacterized protein OS=Borre... 35 2.5 tr|A9UY29|A9UY29_MONBE Predicted protein OS=Monosiga brevicollis... 35 3.2 tr|A0B990|A0B990_METTP Putative uncharacterized protein OS=Metha... 35 3.2 tr|B8EHH7|B8EHH7_BORBU Putative uncharacterized protein OS=Borre... 35 3.2 tr|A1C0Q3|A1C0Q3_9SAUR NADH-ubiquinone oxidoreductase chain 2 OS... 33 7.0 tr|Q5L633|Q5L633_CHLAB Putative membrane transport protein OS=Ch... 33 7.0 tr|Q254G8|Q254G8_CHLFF Type III secretory flagellar biosynthesis... 33 7.0 tr|O34019|O34019_CHLCV Cds2 protein (Type III secretion inner me... 33 7.0 tr|Q6EMR8|Q6EMR8_VARPD N-acyl-D-amino acid amidohydrolase OS=Var... 33 7.2 tr|B4FLP8|B4FLP8_MAIZE Putative uncharacterized protein OS=Zea m... 33 7.2 tr|Q9PKU6|Q9PKU6_CHLMU Type III secretion inner membrane protein... 33 9.2 tr|Q3KMT1|Q3KMT1_CHLTA Low calcium response protein D OS=Chlamyd... 33 9.2 tr|O84092|O84092_CHLTR Low Calcium Response D OS=Chlamydia trach... 33 9.2 tr|B0BB77|B0BB77_CHLTB Low calcium response protein D (Predicted... 33 9.2
>tr|A9UXI9|A9UXI9_MONBE Predicted protein OS=Monosiga brevicollis GN=25017 PE=4 SV=1 Length = 588
Score = 37.4 bits (85), Expect = 0.49 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = -2
Query: 326 SCCSFYSCVAIDFSLGVSKPITPNMAVSTFIIV-VTANIPTIIMLSISPSMIASLWLQSL 150 SC SF+ CV++ SL VS ++ ++ +S + V ++ ++ + LS+S S+ SL L Sbjct: 29 SCLSFFLCVSVFVSLSVSLSLSLSLCLSLSLSVSLSLSLSLSLSLSLSLSLSLSLSLSVS 88
Query: 149 LL*NFILSVMISLS 108 L + LS+ +SLS Sbjct: 89 LSLSLSLSLSLSLS 102
>tr|B0XJ76|B0XJ76_CULQU Putative uncharacterized protein (Fragment) OS=Culex quinquefasciatus GN=CpipJ_CPIJ019309 PE=4 SV=1 Length = 193
Score = 36.6 bits (83), Expect = 0.83 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Frame = -2
Query: 383 LLRFVLTLSSPSLAIQV*FSCCSFYSCVAI----------DFSLGVSKPITPNMAVSTFI 234 L +F+L + L+I + SC + C++I F+L VS + +++VS F Sbjct: 85 LTQFILVCLNLYLSISMSLSCHNLSKCLSICLCLYQISSACFNLSVSVCLNLSLSVSVFF 144
Query: 233 IVVTANIPTIIMLSISPSMIASLWLQSLLL*NFILSVMISLS 108 + ++ ++ + LS S + + L+ N LS+ + LS Sbjct: 145 VCISLSLTVSVCLSFSHKSLYLSFFSPLVCLNLSLSIFMGLS 186
>tr|Q6K9R3|Q6K9R3_ORYSJ Os02g0819100 protein OS=Oryza sativa subsp. japonica GN=OJ1202_E07.17 PE=4 SV=1 Length = 272
Score = 35.8 bits (81), Expect = 1.4 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 13/55 (23%) Frame = -1
Query: 237 HHCRHCQH---PYDHHAV----------YKSFNDCILVATIPSIIKFHPLCDDLF 112 HHC+ C+ DHH V YKSF C+L ATI S+ F DLF Sbjct: 109 HHCKVCKRCVLKMDHHCVWINNCVGYANYKSFIICVLNATIGSLYSFVVFLFDLF 163
>tr|B8AEW3|B8AEW3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09467 PE=4 SV=1 Length = 273
Score = 35.8 bits (81), Expect = 1.4 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 13/55 (23%) Frame = -1
Query: 237 HHCRHCQH---PYDHHAV----------YKSFNDCILVATIPSIIKFHPLCDDLF 112 HHC+ C+ DHH V YKSF C+L ATI S+ F DLF Sbjct: 110 HHCKVCKRCVLKMDHHCVWINNCVGYANYKSFIICVLNATIGSLYSFVVFLFDLF 164
>tr|A3ACQ7|A3ACQ7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008579 PE=4 SV=1 Length = 239
Score = 35.8 bits (81), Expect = 1.4 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 13/55 (23%) Frame = -1
Query: 237 HHCRHCQH---PYDHHAV----------YKSFNDCILVATIPSIIKFHPLCDDLF 112 HHC+ C+ DHH V YKSF C+L ATI S+ F DLF Sbjct: 109 HHCKVCKRCVLKMDHHCVWINNCVGYANYKSFIICVLNATIGSLYSFVVFLFDLF 163
>tr|Q9S074|Q9S074_BORBU Putative uncharacterized protein OS=Borrelia burgdorferi GN=BB_O42 PE=4 SV=1 Length = 189
Score = 35.4 bits (80), Expect = 1.9 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = +1
Query: 103 MKDKEIITERMKFYNRR-DCSHKDAIIEGLIDSMMIVGMLAVTTMMNVETAMLGVIGLDT 279 +KDK II + F NR+ DCS+K ++E ++ M G T +++ + ++ IG Sbjct: 89 LKDKHIIEKYKNFQNRKFDCSYKKGMLEKCLEKM---GEKYSTRFLSIVSNIMDEIGNKD 145
Query: 280 PSEKSI 297 P +SI Sbjct: 146 PERESI 151
>tr|Q5XYN6|Q5XYN6_BORGA Putative uncharacterized protein OS=Borrelia garinii GN=BGP245 PE=4 SV=1 Length = 189
Score = 35.4 bits (80), Expect = 1.9 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = +1
Query: 103 MKDKEIITERMKFYNRR-DCSHKDAIIEGLIDSMMIVGMLAVTTMMNVETAMLGVIGLDT 279 +KDK II + F NR+ DCS+K ++E ++ M G T +++ + ++ IG Sbjct: 89 LKDKHIIEKYKNFQNRKFDCSYKKGMLEKCLEKM---GEKYSTRFLSIVSNIMDEIGNKD 145
Query: 280 PSEKSI 297 P +SI Sbjct: 146 PERESI 151
>tr|Q66Z56|Q66Z56_BORBU Putative uncharacterized protein (Fragment) OS=Borrelia burgdorferi GN=BBQ48 PE=4 SV=1 Length = 193
Score = 35.4 bits (80), Expect = 1.9 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = +1
Query: 103 MKDKEIITERMKFYNRR-DCSHKDAIIEGLIDSMMIVGMLAVTTMMNVETAMLGVIGLDT 279 +KDK II + F NR+ DCS+K ++E ++ M G T +++ + ++ IG Sbjct: 93 LKDKHIIEKYKNFQNRKFDCSYKKGMLEKCLEKM---GEKYSTRFLSIVSNIMDEIGNKD 149
Query: 280 PSEKSI 297 P +SI Sbjct: 150 PERESI 155
>tr|B8EH67|B8EH67_BORBU Putative uncharacterized protein OS=Borrelia burgdorferi 156a GN=Bbu156a_X41 PE=4 SV=1 Length = 175
Score = 35.4 bits (80), Expect = 1.9 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = +1
Query: 103 MKDKEIITERMKFYNRR-DCSHKDAIIEGLIDSMMIVGMLAVTTMMNVETAMLGVIGLDT 279 +KDK II + F NR+ DCS+K ++E ++ M G T +++ + ++ IG Sbjct: 75 LKDKHIIEKYKNFQNRKFDCSYKKGMLEKCLEKM---GEKYSTRFLSIVSNIMDEIGNKD 131
Query: 280 PSEKSI 297 P +SI Sbjct: 132 PERESI 137
>tr|B8EH04|B8EH04_BORBU Putative uncharacterized protein OS=Borrelia burgdorferi 156a GN=Bbu156a_S40 PE=4 SV=1 Length = 175
Score = 35.4 bits (80), Expect = 1.9 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = +1
Query: 103 MKDKEIITERMKFYNRR-DCSHKDAIIEGLIDSMMIVGMLAVTTMMNVETAMLGVIGLDT 279 +KDK II + F NR+ DCS+K ++E ++ M G T +++ + ++ IG Sbjct: 75 LKDKHIIEKYKNFQNRKFDCSYKKGMLEKCLEKM---GEKYSTRFLSIVSNIMDEIGNKD 131
Query: 280 PSEKSI 297 P +SI Sbjct: 132 PERESI 137
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