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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918722
Clone id YMU001_000116_G04
Library
Length 566
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000116_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGAAGCTCTAATGCCAATGAGAGTGCCAGCAACGCTAACACAGGGTTATCAGGCACCACA
GGAACAACTGATATGGGATATGCAGGTGTTTTGCGCATGAGAGGCTTGCCATACAGTTGC
ACTCTGGCCGACATTAGTGTGTTTTTTCAAGGCATGCAGATTGTCCCTGACGGAATTTTT
CTATGCTCTCATGGAGATGGTCGACCTACTGGTGAGGCATTTGTGGAATTCATTAATGAA
GAAACGGCTTCACAGGCGATGAAACTACACCGAGAACCAATGGGATCTCGCTATGTGGAG
CTTTTCCGAAGCACTAAAGGTGAGATGGTGTCGGTTGTGAAGCAGCAGATGTATGGTCTT
TCTTCACGTATGGGGGGATATTCCAGTCATGGACAGATACCAGGAATGATGGGTGCGATT
GGGCTGCCTGGTTTGGGACTAATGAACTGTGCCGCAGGAATGGGGCTTAGTAGCATTTTA
GATGGAACGATGAAAGACACTTCTGAAAATGTGTGCGTAAAGATGAGAGGTCTTCCATTT
AATGCGGAGAAAGACGATATTGTCAA
■■Homology search results ■■ -
sp_hit_id Q5E9J1
Definition sp|Q5E9J1|HNRPF_BOVIN Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus
Align length 203
Score (bit) 99.8
E-value 9.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918722|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_G04.
         (566 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5E9J1|HNRPF_BOVIN Heterogeneous nuclear ribonucleoprotein F ...   100   9e-21
sp|O35737|HNRH1_MOUSE Heterogeneous nuclear ribonucleoprotein H ...   100   9e-21
sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H ...   100   9e-21
sp|Q8VHV7|HNRH1_RAT Heterogeneous nuclear ribonucleoprotein H OS...    99   1e-20
sp|Q794E4|HNRPF_RAT Heterogeneous nuclear ribonucleoprotein F OS...    99   2e-20
sp|Q9Z2X1|HNRPF_MOUSE Heterogeneous nuclear ribonucleoprotein F ...    99   2e-20
sp|Q60HC3|HNRPF_MACFA Heterogeneous nuclear ribonucleoprotein F ...    98   3e-20
sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F ...    97   4e-20
sp|Q6AY09|HNRH2_RAT Heterogeneous nuclear ribonucleoprotein H2 O...    97   4e-20
sp|Q5RD26|HNRH2_PONAB Heterogeneous nuclear ribonucleoprotein H2...    97   4e-20
sp|P70333|HNRH2_MOUSE Heterogeneous nuclear ribonucleoprotein H2...    97   4e-20
sp|P55795|HNRH2_HUMAN Heterogeneous nuclear ribonucleoprotein H2...    97   4e-20
sp|Q3SZF3|HNRH2_BOVIN Heterogeneous nuclear ribonucleoprotein H2...    97   7e-20
sp|P31942|HNRH3_HUMAN Heterogeneous nuclear ribonucleoprotein H3...    91   3e-18
sp|Q5ZLR4|RB35B_CHICK RNA-binding protein 35B OS=Gallus gallus G...    83   1e-15
sp|A1L1G1|RB35A_DANRE RNA-binding protein 35A OS=Danio rerio GN=...    82   2e-15
sp|Q3US41|RB35A_MOUSE RNA-binding protein 35A OS=Mus musculus GN...    81   3e-15
sp|Q7ZVR8|RB35B_DANRE RNA-binding protein 35B OS=Danio rerio GN=...    81   4e-15
sp|Q6DEZ7|RB35A_XENTR RNA-binding protein 35A OS=Xenopus tropica...    80   5e-15
sp|Q7ZY29|RB35A_XENLA RNA-binding protein 35A OS=Xenopus laevis ...    80   5e-15
sp|Q6NXG1|RB35A_HUMAN RNA-binding protein 35A OS=Homo sapiens GN...    80   7e-15
sp|Q8K0G8|RB35B_MOUSE RNA-binding protein 35B OS=Mus musculus GN...    79   2e-14
sp|Q8C5Q4|GRSF1_MOUSE G-rich sequence factor 1 OS=Mus musculus G...    79   2e-14
sp|Q12849|GRSF1_HUMAN G-rich sequence factor 1 OS=Homo sapiens G...    79   2e-14
sp|Q9H6T0|RB35B_HUMAN RNA-binding protein 35B OS=Homo sapiens GN...    76   1e-13
sp|Q80YR9|R12BA_MOUSE RNA-binding protein 12B-A OS=Mus musculus ...    65   3e-10
sp|Q66JV4|R12BB_MOUSE RNA-binding protein 12B-B OS=Mus musculus ...    64   4e-10
sp|Q5RFT7|RB12B_PONAB RNA-binding protein 12B OS=Pongo abelii GN...    63   9e-10
sp|Q8IXT5|RB12B_HUMAN RNA-binding protein 12B OS=Homo sapiens GN...    63   9e-10
sp|Q5RBM8|RBM12_PONAB RNA-binding protein 12 OS=Pongo abelii GN=...    58   4e-08

>sp|Q5E9J1|HNRPF_BOVIN Heterogeneous nuclear ribonucleoprotein F
           OS=Bos taurus GN=HNRNPF PE=2 SV=3
          Length = 414

 Score = 99.8 bits (247), Expect = 9e-21
 Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 37/203 (18%)
 Frame = +1

Query: 64  TTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEE 243
           + D    G +R+RGLP+ CT  +I  FF G++IVP+GI L    +G+ TGEAFV+F ++E
Sbjct: 104 SADTANDGFVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQE 163

Query: 244 TASQAMKLHREPMGSRYVELFRSTKGEM----------------------------VSVV 339
            A +A+  H+E +G RY+E+F+S++ E+                            + +V
Sbjct: 164 LAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIV 223

Query: 340 KQ---QMYGLSSRMGGYSSHGQIPGMMGAIG----LPGLGLMNCAAGMGLSSILDG--TM 492
           KQ   +     +   GY  + +  G+    G    L G  L  C +GM      DG  T+
Sbjct: 224 KQAGLERMRSGAYSAGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDGEFTV 283

Query: 493 KDTSENVCVKMRGLPFNAEKDDI 561
           + T+ + CV MRGLP+ A ++DI
Sbjct: 284 QSTTGH-CVHMRGLPYKATENDI 305



 Score = 66.6 bits (161), Expect = 8e-11
 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC++ D+  F     I     G+      +GR +GEAFVE  +E+  
Sbjct: 8   GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVK 342
             A+K  RE MG RY+E+F+S + EM  V+K
Sbjct: 68  KLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98



 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 38/88 (43%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQM 351
           R  M  RY+ELF  ST G        QM
Sbjct: 349 RANMQHRYIELFLNSTTGASNGAYSSQM 376


>sp|O35737|HNRH1_MOUSE Heterogeneous nuclear ribonucleoprotein H
           OS=Mus musculus GN=Hnrnph1 PE=1 SV=3
          Length = 449

 Score = 99.8 bits (247), Expect = 9e-21
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 37/201 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILDG--TMKD 498
            G      GA G                       G  L  C +GM      DG  T + 
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQS 285

Query: 499 TSENVCVKMRGLPFNAEKDDI 561
           T+ + CV MRGLP+ A ++DI
Sbjct: 286 TTGH-CVHMRGLPYRATENDI 305



 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +E+  
Sbjct: 8   GEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLP 429
             A+K  RE MG RYVE+F+S   EM  V+K    G +S                     
Sbjct: 68  KLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS--------------------- 104

Query: 430 GLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                 DT+ +  V++RGLPF   K++IV
Sbjct: 105 ---------------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G+T  +  G+   + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA 
Sbjct: 277 GDGGSTFQSTTGHC--VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEAD 332

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           VEF   E A  AM   +  M  RYVELF  ST G      + +   L       S+ G  
Sbjct: 333 VEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLN----STAGAS 388

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSS 474
            G  G+  + G+GL N ++  G +S
Sbjct: 389 GGAYGSQMMGGMGLSNQSSYGGPAS 413


>sp|P31943|HNRH1_HUMAN Heterogeneous nuclear ribonucleoprotein H
           OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4
          Length = 449

 Score = 99.8 bits (247), Expect = 9e-21
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 37/201 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILDG--TMKD 498
            G      GA G                       G  L  C +GM      DG  T + 
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQS 285

Query: 499 TSENVCVKMRGLPFNAEKDDI 561
           T+ + CV MRGLP+ A ++DI
Sbjct: 286 TTGH-CVHMRGLPYRATENDI 305



 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
 Frame = +1

Query: 67  TDMGYAGVLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINE 240
           T+ G   V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +E
Sbjct: 5   TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64

Query: 241 ETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAI 420
           +    A+K  RE MG RYVE+F+S   EM  V+K    G +S                  
Sbjct: 65  DEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS------------------ 104

Query: 421 GLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                    DT+ +  V++RGLPF   K++IV
Sbjct: 105 ------------------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G+T  +  G+   + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA 
Sbjct: 277 GDGGSTFQSTTGHC--VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEAD 332

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           VEF   E A  AM   +  M  RYVELF  ST G      + +   L       S+ G  
Sbjct: 333 VEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLN----STAGAS 388

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSS 474
            G  G+  + G+GL N ++  G +S
Sbjct: 389 GGAYGSQMMGGMGLSNQSSYGGPAS 413


>sp|Q8VHV7|HNRH1_RAT Heterogeneous nuclear ribonucleoprotein H
           OS=Rattus norvegicus GN=Hnrnph1 PE=1 SV=2
          Length = 449

 Score = 99.4 bits (246), Expect = 1e-20
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 37/201 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILDG--TMKD 498
            G      GA G                       G  L  C +GM      DG  T + 
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQS 285

Query: 499 TSENVCVKMRGLPFNAEKDDI 561
           T+ + CV MRGLP+ A ++DI
Sbjct: 286 TTGH-CVHMRGLPYRATENDI 305



 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +E+  
Sbjct: 8   GEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVK 342
             A+K  RE MG RYVE+F+S   EM  V+K
Sbjct: 68  KLALKKDRETMGHRYVEVFKSNNVEMDWVLK 98



 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G+T  +  G+   + MRGLPY  T  DI  FF  +   P  + + +  DGR TGEA 
Sbjct: 277 GDGGSTFQSTTGHC--VHMRGLPYRATENDIYNFFSPLN--PVRVHIETGPDGRVTGEAD 332

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           VEF   E A  AM   +  M  RYVELF  ST G      + +   L       S+ G  
Sbjct: 333 VEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLN----STAGAS 388

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSS 474
            G  G+  + G+GL N ++  G +S
Sbjct: 389 GGAYGSQMMGGMGLSNQSSYGGPAS 413


>sp|Q794E4|HNRPF_RAT Heterogeneous nuclear ribonucleoprotein F
           OS=Rattus norvegicus GN=Hnrnpf PE=1 SV=3
          Length = 415

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
 Frame = +1

Query: 64  TTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEE 243
           + D    G +R+RGLP+ CT  +I  FF G++IVP+GI L    +G+ TGEAFV+F ++E
Sbjct: 104 SADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQE 163

Query: 244 TASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLS-SRMGGYSSHGQIPGMMGAI 420
            A +A+  H+E +G RY+E+F+S++ E+ S     +  +S  R G Y   G     +G +
Sbjct: 164 LAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIV 223

Query: 421 GLPGLGLMNCAA-------------------------GMGLSSILDG-----------TM 492
              GL  M   A                         G  LS  L G           T+
Sbjct: 224 KQAGLDRMRSGAYSAGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTV 283

Query: 493 KDTSENVCVKMRGLPFNAEKDDI 561
           + T+ + CV MRGLP+ A ++DI
Sbjct: 284 QSTTGH-CVHMRGLPYKATENDI 305



 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC++ D+  F     I     G+      +GR +GEAFVE  +E+  
Sbjct: 8   GEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVK 342
             A+K  RE MG RY+E+F+S + EM  V+K
Sbjct: 68  KLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQM---YGLSSRMGGYS 384
           R  M  RY+ELF  ST G        Q+    G+S+    YS
Sbjct: 349 RANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYS 390


>sp|Q9Z2X1|HNRPF_MOUSE Heterogeneous nuclear ribonucleoprotein F
           OS=Mus musculus GN=Hnrnpf PE=1 SV=3
          Length = 415

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
 Frame = +1

Query: 64  TTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEE 243
           + D    G +R+RGLP+ CT  +I  FF G++IVP+GI L    +G+ TGEAFV+F ++E
Sbjct: 104 SADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQE 163

Query: 244 TASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLS-SRMGGYSSHGQIPGMMGAI 420
            A +A+  H+E +G RY+E+F+S++ E+ S     +  +S  R G Y   G     +G +
Sbjct: 164 LAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIV 223

Query: 421 GLPGLGLMNCAA-------------------------GMGLSSILDG-----------TM 492
              GL  M   A                         G  LS  L G           T+
Sbjct: 224 KQAGLDRMRSGAYSAGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTV 283

Query: 493 KDTSENVCVKMRGLPFNAEKDDI 561
           + T+ + CV MRGLP+ A ++DI
Sbjct: 284 QSTTGH-CVHMRGLPYKATENDI 305



 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC++ D+  F     I     G+      +GR +GEAFVE  +E+  
Sbjct: 8   GEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVK 342
             A+K  RE MG RY+E+F+S + EM  V+K
Sbjct: 68  KLALKKDRESMGHRYIEVFKSHRTEMDWVLK 98



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQM---YGLSSRMGGYS 384
           R  M  RY+ELF  ST G        Q+    G+S+    YS
Sbjct: 349 RANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYS 390


>sp|Q60HC3|HNRPF_MACFA Heterogeneous nuclear ribonucleoprotein F
           OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3
          Length = 415

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 37/203 (18%)
 Frame = +1

Query: 64  TTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEE 243
           + D    G +R+RGLP+ CT  +I  FF G++IVP+GI L    +G+ TGEAFV+F ++E
Sbjct: 104 SADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQE 163

Query: 244 TASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLS-SRMGGYSSHGQIPGMMGAI 420
            A +A+  H+E +G RY+E+F+S++ E+ S     +  +S  R G Y   G     +G +
Sbjct: 164 LAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIV 223

Query: 421 GLPGLGLMNCAA-------------------------GMGLSSILDG-----------TM 492
              GL  M  +A                         G  LS  L G           T+
Sbjct: 224 KQAGLERMRPSAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTV 283

Query: 493 KDTSENVCVKMRGLPFNAEKDDI 561
           + T+ + CV MRGLP+ A ++DI
Sbjct: 284 QSTTGH-CVHMRGLPYKATENDI 305



 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC++ D+  F     I     G+      +GR +GEAFVE  +E+  
Sbjct: 8   GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVK 342
             A+K  RE MG RY+E+F+S + EM  V+K
Sbjct: 68  KMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98



 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 42/102 (41%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQM---YGLSSRMGGYS 384
           R  M  RY+ELF  ST G        Q+    G+SS    YS
Sbjct: 349 RANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSSAQATYS 390


>sp|P52597|HNRPF_HUMAN Heterogeneous nuclear ribonucleoprotein F
           OS=Homo sapiens GN=HNRNPF PE=1 SV=3
          Length = 415

 Score = 97.4 bits (241), Expect = 4e-20
 Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 37/203 (18%)
 Frame = +1

Query: 64  TTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEE 243
           + D    G +R+RGLP+ CT  +I  FF G++IVP+GI L    +G+ TGEAFV+F ++E
Sbjct: 104 SADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQE 163

Query: 244 TASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLS-SRMGGYSSHGQIPGMMGAI 420
            A +A+  H+E +G RY+E+F+S++ E+ S     +  +S  R G Y   G     +G +
Sbjct: 164 LAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIV 223

Query: 421 GLPGLGLMNCAA-------------------------GMGLSSILDG-----------TM 492
              GL  M   A                         G  LS  L G           T+
Sbjct: 224 KQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTV 283

Query: 493 KDTSENVCVKMRGLPFNAEKDDI 561
           + T+ + CV MRGLP+ A ++DI
Sbjct: 284 QSTTGH-CVHMRGLPYKATENDI 305



 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC++ D+  F     I     G+      +GR +GEAFVE  +E+  
Sbjct: 8   GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVK 342
             A+K  RE MG RY+E+F+S + EM  V+K
Sbjct: 68  KMALKKDRESMGHRYIEVFKSHRTEMDWVLK 98



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYKATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQM---YGLSSRMGGYS 384
           R  M  RY+ELF  ST G        Q+    G+S+    YS
Sbjct: 349 RANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYS 390


>sp|Q6AY09|HNRH2_RAT Heterogeneous nuclear ribonucleoprotein H2
           OS=Rattus norvegicus GN=Hnrnph2 PE=1 SV=1
          Length = 449

 Score = 97.4 bits (241), Expect = 4e-20
 Identities = 68/200 (34%), Positives = 102/200 (51%), Gaps = 36/200 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+G+ L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMTMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILD-GTMKDT 501
            G      GA G                       G  L  C +GM      D G+   +
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYGGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSSFQS 285

Query: 502 SENVCVKMRGLPFNAEKDDI 561
           +   CV MRGLP+ A ++DI
Sbjct: 286 TTGHCVHMRGLPYRATENDI 305



 Score = 69.7 bits (169), Expect = 9e-12
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
 Frame = +1

Query: 88  VLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINEETASQAM 261
           V+++RGLP+SC+  ++  FF   +I     G+      +GRP+GEAFVE  +E+    A+
Sbjct: 12  VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLAL 71

Query: 262 KLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLPGLGL 441
           K  RE MG RYVE+F+S   EM  V+K    G +S                         
Sbjct: 72  KKDRETMGHRYVEVFKSNSVEMDWVLKHT--GPNS------------------------- 104

Query: 442 MNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                             DT+ +  V++RGLPF   K++IV
Sbjct: 105 -----------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 47/129 (36%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLN--PMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLPGLGLMN 447
           +  M  RYVELF  ST G            L       S+ G   G  G+  + G+GL N
Sbjct: 349 KANMQHRYVELFLNSTAGTSGGAYDHSYVELFLN----STAGASGGAYGSQMMGGMGLSN 404

Query: 448 CAAGMGLSS 474
            ++  G +S
Sbjct: 405 QSSYGGPAS 413


>sp|Q5RD26|HNRH2_PONAB Heterogeneous nuclear ribonucleoprotein H2
           OS=Pongo abelii GN=HNRNPH2 PE=2 SV=1
          Length = 449

 Score = 97.4 bits (241), Expect = 4e-20
 Identities = 68/200 (34%), Positives = 102/200 (51%), Gaps = 36/200 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+G+ L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILD-GTMKDT 501
            G      GA G                       G  L  C +GM      D G+   +
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYGGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSSFQS 285

Query: 502 SENVCVKMRGLPFNAEKDDI 561
           +   CV MRGLP+ A ++DI
Sbjct: 286 TTGHCVHMRGLPYRATENDI 305



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
 Frame = +1

Query: 88  VLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINEETASQAM 261
           V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +EE    A+
Sbjct: 12  VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLAL 71

Query: 262 KLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLPGLGL 441
           K  RE MG RYVE+F+S   EM  V+K    G +S                         
Sbjct: 72  KKDRETMGHRYVEVFKSNSVEMDWVLKHT--GPNS------------------------- 104

Query: 442 MNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                             DT+ +  V++RGLPF   K++IV
Sbjct: 105 -----------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 47/129 (36%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 291 VHMRGLPYRATENDIYNFFSPLN--PMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKD 348

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLPGLGLMN 447
           +  M  RYVELF  ST G            L       S+ G   G  G+  + G+GL N
Sbjct: 349 KANMQHRYVELFLNSTAGTSGGAYDHSYVELFLN----STAGASGGAYGSQMMGGMGLSN 404

Query: 448 CAAGMGLSS 474
            ++  G +S
Sbjct: 405 QSSYGGPAS 413
tr_hit_id A9SYU8
Definition tr|A9SYU8|A9SYU8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 181
Score (bit) 237.0
E-value 4.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918722|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_G04.
         (566 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SYU8|A9SYU8_PHYPA Predicted protein OS=Physcomitrella paten...   237   4e-61
tr|A9S1X0|A9S1X0_PHYPA Predicted protein OS=Physcomitrella paten...   233   5e-60
tr|A7SEP3|A7SEP3_NEMVE Predicted protein (Fragment) OS=Nematoste...   107   6e-22
tr|Q5ZM95|Q5ZM95_CHICK Putative uncharacterized protein OS=Gallu...   103   9e-21
tr|Q8C2Q7|Q8C2Q7_MOUSE Heterogeneous nuclear ribonucleoprotein H...   100   9e-20
tr|Q811L7|Q811L7_MOUSE Heterogeneous nuclear ribonucleoprotein H...   100   9e-20
tr|B3KW86|B3KW86_HUMAN cDNA FLJ42539 fis, clone BRACE3004150, hi...   100   9e-20
tr|Q803W8|Q803W8_DANRE Zgc:85960 OS=Danio rerio GN=zgc:85960 PE=...    99   1e-19
tr|Q6WNG8|Q6WNG8_CHICK Heterogeneous nuclear ribonucleoprotein H...    99   2e-19
tr|Q5F3I8|Q5F3I8_CHICK Putative uncharacterized protein OS=Gallu...    99   2e-19
tr|A2BDV8|A2BDV8_MOUSE Heterogeneous nuclear ribonucleoprotein H...    97   5e-19
tr|A5D9B4|A5D9B4_BOVIN Heterogeneous nuclear ribonucleoprotein H...    97   5e-19
tr|B4DKS8|B4DKS8_HUMAN cDNA FLJ57121, highly similar to Heteroge...    97   5e-19
tr|B3KM84|B3KM84_HUMAN cDNA FLJ10502 fis, clone NT2RP2000414, hi...    97   5e-19
tr|A1L400|A1L400_HUMAN Heterogeneous nuclear ribonucleoprotein H...    97   5e-19
tr|A8WG46|A8WG46_DANRE Heterogeneous nuclear ribonucleoprotein H...    97   6e-19
tr|A8K682|A8K682_HUMAN cDNA FLJ76862, highly similar to Homo sap...    96   1e-18
tr|Q6GL26|Q6GL26_XENTR Heterogeneous nuclear ribonucleoprotein H...    96   1e-18
tr|Q6DD57|Q6DD57_XENLA Hnrph2-prov protein (Hnrph2 protein) OS=X...    96   1e-18
tr|Q6P0V0|Q6P0V0_DANRE Heterogeneous nuclear ribonucleoprotein H...    96   2e-18
tr|B6LWM7|B6LWM7_BRAFL Putative uncharacterized protein (Fragmen...    94   4e-18
tr|Q6IRC9|Q6IRC9_XENLA MGC78776 protein OS=Xenopus laevis GN=hnr...    94   5e-18
tr|Q5F3D2|Q5F3D2_CHICK Putative uncharacterized protein OS=Gallu...    92   2e-17
tr|B5DEU6|B5DEU6_XENTR Hnrnph3 protein OS=Xenopus tropicalis GN=...    92   2e-17
tr|B2GUJ1|B2GUJ1_XENTR Hnrnph3 protein OS=Xenopus tropicalis GN=...    92   2e-17
tr|Q22708|Q22708_CAEEL Protein ZK1067.6, confirmed by transcript...    92   2e-17
tr|B6M542|B6M542_BRAFL Putative uncharacterized protein OS=Branc...    92   2e-17
tr|B3MCH0|B3MCH0_DROAN GF13378 OS=Drosophila ananassae GN=GF1337...    91   3e-17
tr|Q53F48|Q53F48_HUMAN Heterogeneous nuclear ribonucleoprotein H...    91   3e-17
tr|B4LJN5|B4LJN5_DROVI GJ21539 OS=Drosophila virilis GN=GJ21539 ...    90   7e-17

>tr|A9SYU8|A9SYU8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_85834 PE=4 SV=1
          Length = 527

 Score =  237 bits (604), Expect = 4e-61
 Identities = 117/181 (64%), Positives = 146/181 (80%), Gaps = 6/181 (3%)
 Frame = +1

Query: 40  TGLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEA 219
           TG+ G +G  DM Y GV+RMRG+PYSCT ADI+ FF+GMQ+V DGIFLC+H DGRPTGEA
Sbjct: 129 TGIPGMSGNPDMRYTGVVRMRGMPYSCTSADITAFFKGMQVVADGIFLCTHADGRPTGEA 188

Query: 220 FVEFINEETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSH--G 393
           FVEF+NEETA++AM+LHREPMGSRYVELFRSTKGEM++ V+Q+MYG+ S  GG+S    G
Sbjct: 189 FVEFVNEETAARAMQLHREPMGSRYVELFRSTKGEMMTAVQQRMYGMFSGAGGFSQFGVG 248

Query: 394 QIPGMMGAIGLPGLGLMNC----AAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
           QIPGMMGA G+ GL  MN     AAG+G  ++  G + DTSE+VC+KMRGLP+NA + +I
Sbjct: 249 QIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTVPQG-LSDTSEHVCIKMRGLPYNAGQREI 307

Query: 562 V 564
           +
Sbjct: 308 M 308



 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 25/185 (13%)
 Frame = +1

Query: 61  GTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINE 240
           G +D      ++MRGLPY+    +I  FF+G   +P+GI +      RPTGEAFVEF++ 
Sbjct: 283 GLSDTSEHVCIKMRGLPYNAGQREIMDFFEGYSFLPNGIHIVMGATDRPTGEAFVEFMSS 342

Query: 241 ETASQAMKLHREPMGSRYVELFRSTKGEM---------------------VSVVKQQ--- 348
           + A +AM+ HR+ +GSRY+ELFR+TK EM                     + +++QQ   
Sbjct: 343 DEAQRAMERHRQNIGSRYIELFRATKSEMLLATGGLSSFGMGQPMDPSVQLLLLQQQAAA 402

Query: 349 -MYGLSSRMGGYSSHGQIPGMMGAIGLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKM 525
             +G++  MG  +S G    M  A           AAG+  S     + + +S     K+
Sbjct: 403 GAFGMTGLMGAQASTGSWVDMQNAAAAAASFYQRQAAGLTGSPASVSSFEPSSS---AKI 459

Query: 526 RGLPF 540
           RGLP+
Sbjct: 460 RGLPY 464



 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
 Frame = +1

Query: 43  GLSGTTGTTD-MGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEA 219
           GL G +   D +  + V+R+RGLP+S T +DI+ FF+G+++ PDG+ +C +  GR TG+A
Sbjct: 6   GLVGGSALDDELKRSNVVRLRGLPFSATESDIADFFKGLEMGPDGVVICVNFQGRSTGQA 65

Query: 220 FVEFINEETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQ--QMYGLSSRMGGYSSHG 393
           +V+F + E A++A++ +R+ +GSRY+E+F+    +M   ++   +  G+ S  G  +S G
Sbjct: 66  YVQFASAELANKALERNRQHIGSRYIEVFKGHPADMQGALRMVGRGSGVVSGSGAVASGG 125

Query: 394 ----QIPGMMGAIGLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
                IPGM G   +   G+                         V+MRG+P++    DI
Sbjct: 126 ILNTGIPGMSGNPDMRYTGV-------------------------VRMRGMPYSCTSADI 160


>tr|A9S1X0|A9S1X0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_162342 PE=4 SV=1
          Length = 550

 Score =  233 bits (594), Expect = 5e-60
 Identities = 117/181 (64%), Positives = 144/181 (79%), Gaps = 6/181 (3%)
 Frame = +1

Query: 40  TGLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEA 219
           TG+ G +G  DM Y GV+RMRG+PYSCT ADI+ FF+GMQ+V DGIFLC+H DGRPTGEA
Sbjct: 129 TGIPGMSGNPDMRYTGVVRMRGMPYSCTSADITAFFKGMQVVADGIFLCTHADGRPTGEA 188

Query: 220 FVEFINEETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSH--G 393
           FVEF NEE A++AM+LHREPMGSRYVELFRSTKGEM++ V+Q+MYG+ S  GG+S    G
Sbjct: 189 FVEFANEEIAARAMQLHREPMGSRYVELFRSTKGEMMTAVQQRMYGMFSGAGGFSQFGVG 248

Query: 394 QIPGMMGAIGLPGLGLMNC----AAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
           QIPGMMGA G+ GL  MN     AAG+G  + L G + DTSE+VC+KMRGLP+NA + +I
Sbjct: 249 QIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTGLQG-LSDTSEHVCIKMRGLPYNAGQREI 307

Query: 562 V 564
           +
Sbjct: 308 M 308



 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 25/190 (13%)
 Frame = +1

Query: 46  LSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFV 225
           ++G  G +D      ++MRGLPY+    +I  FF+G  I+P+GI +      RPTGEAFV
Sbjct: 278 MTGLQGLSDTSEHVCIKMRGLPYNAGQREIMDFFEGYNILPNGIHIVMGATDRPTGEAFV 337

Query: 226 EFINEETASQAMKLHREPMGSRYVELFRSTKGEM---------------------VSVVK 342
           EFI+ + A +AM+ HR+ +GSRY+ELFR+TK EM                     + +++
Sbjct: 338 EFISSDEAQRAMERHRQNIGSRYIELFRATKSEMLLATGGLSSFGMGQPMDPSVQLLLLQ 397

Query: 343 QQ----MYGLSSRMGGYSSHGQIPGMMGAIGLPGLGLMNCAAGMGLSSILDGTMKDTSEN 510
           QQ     +G++  MG  ++ G    M  A           AAG+  S       + +S +
Sbjct: 398 QQAAAGAFGMTGLMGAQATTGSWADMQNAAAAAASFYQRQAAGLTGSPASVSAFEPSSSS 457

Query: 511 VCVKMRGLPF 540
              K+RGLP+
Sbjct: 458 ---KIRGLPY 464



 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
 Frame = +1

Query: 43  GLSGTTGTTD-MGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEA 219
           GL G +   D +  + V+R+RGLP+S + +DI+ FF+G+++ PDG+ +C +  GR TG+A
Sbjct: 6   GLVGGSALDDELKRSNVVRLRGLPFSASESDIADFFKGLEMGPDGVVICVNFQGRSTGQA 65

Query: 220 FVEFINEETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           +V+F   E A++A++ +R+ +GSRY+E+F+    +M   +         RM G  S G +
Sbjct: 66  YVQFATAELANKALERNRQHIGSRYIEVFKGHPADMQGAL---------RMVGRGS-GTV 115

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
            G  GA+   G+ L     GM  +        D      V+MRG+P++    DI
Sbjct: 116 TG-SGAVATGGI-LNTGIPGMSGN-------PDMRYTGVVRMRGMPYSCTSADI 160


>tr|A7SEP3|A7SEP3_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g115454 PE=4 SV=1
          Length = 354

 Score =  107 bits (266), Expect = 6e-22
 Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
 Frame = +1

Query: 67  TDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEET 246
           +D     V+++RGLPY C+  +I+ FF G++IVP+GI +    +G+ TGE FVEF + E 
Sbjct: 99  SDRDQEAVVKLRGLPYGCSKEEIAQFFTGLEIVPNGITITLDEEGKTTGEGFVEFASPEI 158

Query: 247 ASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGL 426
           A QAM+ H+E +G RY+E+F+S+K ++  V+K +   +S+R G Y   G      G  G 
Sbjct: 159 AGQAMQKHKEKIGHRYIEIFKSSKSDIKYVLKPKPL-MSTRPGPYDRMG------GPFGG 211

Query: 427 PGLGL-------MNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
           P  G             G G S    G    +S    V MRGLPF A++ D+
Sbjct: 212 PRFGRGGGDQFERRGGFGGGRSGGTGGFSGVSSTGHTVAMRGLPFGAKETDV 263



 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
 Frame = +1

Query: 88  VLRMRGLPYSCTLADISVFFQGMQIV---PDGIFLCSHGDGRPTGEAFVEFINEETASQA 258
           V+R RGLP+S T  DI  FF+   IV    +G+      DGRP+GE FV+F++E+   +A
Sbjct: 6   VVRARGLPWSATPEDIQNFFKDCNIVGGPQNGVHFTFGIDGRPSGECFVQFVSEKDVEKA 65

Query: 259 MKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLPGLG 438
           ++++ E MG RY+E+FRS   EM  V+K+                               
Sbjct: 66  LEMNNEHMGKRYIEVFRSKAEEMEWVIKRM------------------------------ 95

Query: 439 LMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
                          G   D  +   VK+RGLP+   K++I
Sbjct: 96  ---------------GPPSDRDQEAVVKLRGLPYGCSKEEI 121



 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G +G +  G+   + MRGLP+     D+  FF  M + P  + L    DGR  GE  
Sbjct: 235 GTGGFSGVSSTGHT--VAMRGLPFGAKETDVKQFF--MPLNPVEVRLRWGPDGRCCGEGE 290

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF 306
           V+F     A+ AM   R+ MG RY+ELF
Sbjct: 291 VDFATHADATAAMSKDRQTMGHRYIELF 318


>tr|Q5ZM95|Q5ZM95_CHICK Putative uncharacterized protein OS=Gallus
           gallus GN=RCJMB04_2m14 PE=2 SV=1
          Length = 492

 Score =  103 bits (256), Expect = 9e-21
 Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 29/193 (15%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 136 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 195

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 196 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGLTRGYNSLGRG 255

Query: 400 PGM----MGAIG------------LPGLGLMNCAAGMGLSSILDGTMKDTSENV---CVK 522
            G+     GA G              G G  +   G G+S    G    T ++    CV 
Sbjct: 256 SGLERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRGMSDHRYGDGTSTFQSTTGHCVH 315

Query: 523 MRGLPFNAEKDDI 561
           MRGLP+ A ++DI
Sbjct: 316 MRGLPYRATENDI 328



 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
 Frame = +1

Query: 67  TDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINE 240
           T+     V+++RGLP+SC+  ++  FF   +I+    GI      +GRP+GEAF E  +E
Sbjct: 35  TESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESE 94

Query: 241 ETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAI 420
           E    A+K  RE MG RYVE+F+S   EM  V+K    G +S                  
Sbjct: 95  EDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS------------------ 134

Query: 421 GLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                    DT+ +  V++RGLPF   K++IV
Sbjct: 135 ------------------------PDTANDGFVRLRGLPFGCSKEEIV 158



 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 39/90 (43%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 314 VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 371

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQMYG 357
           +  M  RYVELF  ST G        QM G
Sbjct: 372 KANMQHRYVELFLNSTAGGTGGAYGSQMMG 401


>tr|Q8C2Q7|Q8C2Q7_MOUSE Heterogeneous nuclear ribonucleoprotein H1
           OS=Mus musculus GN=Hnrnph1 PE=2 SV=1
          Length = 472

 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 37/201 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILDG--TMKD 498
            G      GA G                       G  L  C +GM      DG  T + 
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQS 285

Query: 499 TSENVCVKMRGLPFNAEKDDI 561
           T+ + CV MRGLP+ A ++DI
Sbjct: 286 TTGH-CVHMRGLPYRATENDI 305



 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +E+  
Sbjct: 8   GEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLP 429
             A+K  RE MG RYVE+F+S   EM  V+K    G +S                     
Sbjct: 68  KLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS--------------------- 104

Query: 430 GLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                 DT+ +  V++RGLPF   K++IV
Sbjct: 105 ---------------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G+T  +  G+   + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA 
Sbjct: 277 GDGGSTFQSTTGHC--VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEAD 332

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           VEF   E A  AM   +  M  RYVELF  ST G      + +   L       S+ G  
Sbjct: 333 VEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLN----STAGAS 388

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSS 474
            G  G+  + G+GL N ++  G +S
Sbjct: 389 GGAYGSQMMGGMGLSNQSSYGGPAS 413


>tr|Q811L7|Q811L7_MOUSE Heterogeneous nuclear ribonucleoprotein H1
           OS=Mus musculus GN=Hnrnph1 PE=2 SV=2
          Length = 449

 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 37/201 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILDG--TMKD 498
            G      GA G                       G  L  C +GM      DG  T + 
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQS 285

Query: 499 TSENVCVKMRGLPFNAEKDDI 561
           T+ + CV MRGLP+ A ++DI
Sbjct: 286 TTGH-CVHMRGLPYRATENDI 305



 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
 Frame = +1

Query: 76  GYAGVLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINEETA 249
           G   V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +E+  
Sbjct: 8   GEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEV 67

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAIGLP 429
             A+K  RE MG RYVE+F+S   EM  V+K    G +S                     
Sbjct: 68  KLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS--------------------- 104

Query: 430 GLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                 DT+ +  V++RGLPF   K++IV
Sbjct: 105 ---------------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G+T  +  G+   + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA 
Sbjct: 277 GDGGSTFQSTTGHC--VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEAD 332

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           VEF   E A  AM   +  M  RYVELF  ST G      + +   L       S+ G  
Sbjct: 333 VEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLN----STAGAS 388

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSS 474
            G  G+  + G+GL N ++  G +S
Sbjct: 389 GGAYGSQMMGGMGLSNQSSYGGPAS 413


>tr|B3KW86|B3KW86_HUMAN cDNA FLJ42539 fis, clone BRACE3004150,
           highly similar to Heterogeneous nuclear
           ribonucleoprotein H (Heterogeneous nuclear
           ribonucleoprotein H1 (H), isoform CRA_a) OS=Homo sapiens
           GN=HNRPH1 PE=2 SV=1
          Length = 449

 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 37/201 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 165

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 166 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRG 225

Query: 400 PGM----MGAIG---------------------LPGLGLMNCAAGMGLSSILDG--TMKD 498
            G      GA G                       G  L  C +GM      DG  T + 
Sbjct: 226 AGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQS 285

Query: 499 TSENVCVKMRGLPFNAEKDDI 561
           T+ + CV MRGLP+ A ++DI
Sbjct: 286 TTGH-CVHMRGLPYRATENDI 305



 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
 Frame = +1

Query: 67  TDMGYAGVLRMRGLPYSCTLADISVFFQGMQIV--PDGIFLCSHGDGRPTGEAFVEFINE 240
           T+ G   V+++RGLP+SC+  ++  FF   +I     GI      +GRP+GEAFVE  +E
Sbjct: 5   TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64

Query: 241 ETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAI 420
           +    A+K  RE MG RYVE+F+S   EM  V+K    G +S                  
Sbjct: 65  DEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS------------------ 104

Query: 421 GLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                    DT+ +  V++RGLPF   K++IV
Sbjct: 105 ------------------------PDTANDGFVRLRGLPFGCSKEEIV 128



 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G+T  +  G+   + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA 
Sbjct: 277 GDGGSTFQSTTGHC--VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEAD 332

Query: 223 VEFINEETASQAMKLHREPMGSRYVELF-RSTKGEMVSVVKQQMYGLSSRMGGYSSHGQI 399
           VEF   E A  AM   +  M  RYVELF  ST G      + +   L       S+ G  
Sbjct: 333 VEFATHEDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLN----STAGAS 388

Query: 400 PGMMGAIGLPGLGLMNCAAGMGLSS 474
            G  G+  + G+GL N ++  G +S
Sbjct: 389 GGAYGSQMMGGMGLSNQSSYGGPAS 413


>tr|Q803W8|Q803W8_DANRE Zgc:85960 OS=Danio rerio GN=zgc:85960 PE=2
           SV=1
          Length = 407

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
 Frame = +1

Query: 85  GVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMK 264
           G++R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F +++ A +A+K
Sbjct: 107 GLVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQDIAEKALK 166

Query: 265 LHREPMGSRYVELFRSTKGEMVSVVKQQMYGLS-SRMGGY---SSHGQ-IPGMMGAIGLP 429
            H+E +G RY+E+F+S++ E+ +  +    G+   R G Y   S  G+   GM       
Sbjct: 167 KHKERIGHRYIEIFKSSRAEVRTHYEPPRKGMGMQRPGPYDRPSGGGRGYNGMSRGGSFD 226

Query: 430 GLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDI 561
            +       G+      DG    ++   CV MRGLP+ A + DI
Sbjct: 227 RMRRGGYGGGVSDGRYGDGGNFQSTTGHCVHMRGLPYRATEPDI 270



 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +1

Query: 88  VLRMRGLPYSCTLADISVFFQGMQIVPDG--IFLCSHGDGRPTGEAFVEFINEETASQAM 261
           V+R+RGLP+SC+  ++S FF G +I  +G  I      +GRP+GEAFVE  +E+    A+
Sbjct: 8   VVRVRGLPWSCSAEEVSRFFSGCKISSNGSAIHFTYTREGRPSGEAFVELESEDDLKIAV 67

Query: 262 KLHREPMGSRYVELFRSTKGEMVSVVK 342
           K  RE MG RYVE+F+S   EM  V+K
Sbjct: 68  KKDRESMGHRYVEVFKSNNVEMDWVLK 94



 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 51/165 (30%), Positives = 67/165 (40%), Gaps = 33/165 (20%)
 Frame = +1

Query: 43  GLSGTTGTTDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAF 222
           G  G  G         + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA 
Sbjct: 240 GRYGDGGNFQSTTGHCVHMRGLPYRATEPDIYNFFSPLN--PVRVHIEIGPDGRVTGEAD 297

Query: 223 VEFINEETASQAMKLHREPMGSRYVELFRSTK---------GEMVSVVKQQM-------- 351
           VEF   E A  AM   +  M  RYVELF ++          G+M+  +  Q         
Sbjct: 298 VEFATHEDAVAAMSNDKANMQHRYVELFLNSTAGGSNGGYGGQMMGGMGNQSSYGHGGQQ 357

Query: 352 --------YGLSSRMGGYSSHGQIPGM--------MGAIGLPGLG 438
                   Y   S MGGY+ +    GM         G++G+ G+G
Sbjct: 358 MGGGYTGGYSSQSSMGGYNDYNSQGGMSNSYYGGSRGSVGMNGMG 402


>tr|Q6WNG8|Q6WNG8_CHICK Heterogeneous nuclear ribonucleoprotein
           H1-like protein OS=Gallus gallus PE=2 SV=1
          Length = 519

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 36/200 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 156 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 215

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 216 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGLTRGYNSLGRG 275

Query: 400 PGM----MGAIG------------LPGLGLMN---------CAAGMGLSSILDGTMK-DT 501
            G+     GA G              G G  +          +AGM      DGT    +
Sbjct: 276 SGLERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGREWTLFSAGMSDHRYGDGTSTFQS 335

Query: 502 SENVCVKMRGLPFNAEKDDI 561
           +   CV MRGLP+ A ++DI
Sbjct: 336 TTGHCVHMRGLPYRATENDI 355



 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
 Frame = +1

Query: 67  TDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINE 240
           T+     V+++RGLP+SC+  ++  FF   +I+    GI      +GRP+GEAF E  +E
Sbjct: 55  TESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESE 114

Query: 241 ETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAI 420
           E    A+K  RE MG RYVE+F+S   EM  V+K    G +S                  
Sbjct: 115 EDVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHT--GPNS------------------ 154

Query: 421 GLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                    DT+ +  V++RGLPF   K++IV
Sbjct: 155 ------------------------PDTANDGFVRLRGLPFGCSKEEIV 178



 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 39/90 (43%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 341 VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 398

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQMYG 357
           +  M  RYVELF  ST G        QM G
Sbjct: 399 KANMQHRYVELFLNSTAGGTGGAYGSQMMG 428


>tr|Q5F3I8|Q5F3I8_CHICK Putative uncharacterized protein OS=Gallus
           gallus GN=RCJMB04_15n19 PE=2 SV=1
          Length = 499

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 36/200 (18%)
 Frame = +1

Query: 70  DMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETA 249
           D    G +R+RGLP+ C+  +I  FF G++IVP+GI L     GR TGEAFV+F ++E A
Sbjct: 136 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIA 195

Query: 250 SQAMKLHREPMGSRYVELFRSTKGEMVS-------VVKQQMYGLSSRMG---GYSSHGQI 399
            +A+K H+E +G RY+E+F+S++ E+ +       ++  Q  G   R G   GY+S G+ 
Sbjct: 196 EKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGLTRGYNSLGRG 255

Query: 400 PGM----MGAIG------------LPGLGLMN---------CAAGMGLSSILDGTMK-DT 501
            G+     GA G              G G  +          +AGM      DGT    +
Sbjct: 256 SGLERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGREWTLFSAGMSDHRYGDGTSTFQS 315

Query: 502 SENVCVKMRGLPFNAEKDDI 561
           +   CV MRGLP+ A ++DI
Sbjct: 316 TTGHCVHMRGLPYRATENDI 335



 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
 Frame = +1

Query: 67  TDMGYAGVLRMRGLPYSCTLADISVFFQGMQIVPD--GIFLCSHGDGRPTGEAFVEFINE 240
           T+     V+++RGLP+SC+  ++  FF   +I+    GI      +GRP+GEAF E  +E
Sbjct: 35  TESSEGYVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESE 94

Query: 241 ETASQAMKLHREPMGSRYVELFRSTKGEMVSVVKQQMYGLSSRMGGYSSHGQIPGMMGAI 420
           E    A+K  RE MG RYV +F+S   EM  V+K    G +S                  
Sbjct: 95  EDVKLALKKDRETMGHRYVVVFKSNNVEMDWVLKHT--GPNS------------------ 134

Query: 421 GLPGLGLMNCAAGMGLSSILDGTMKDTSENVCVKMRGLPFNAEKDDIV 564
                                    DT+ +  V++RGLPF   K++IV
Sbjct: 135 ------------------------PDTANDGFVRLRGLPFGCSKEEIV 158



 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 39/90 (43%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 91  LRMRGLPYSCTLADISVFFQGMQIVPDGIFLCSHGDGRPTGEAFVEFINEETASQAMKLH 270
           + MRGLPY  T  DI  FF  +   P  + +    DGR TGEA VEF   E A  AM   
Sbjct: 321 VHMRGLPYRATENDIYNFFSPLN--PVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 378

Query: 271 REPMGSRYVELF-RSTKGEMVSVVKQQMYG 357
           +  M  RYVELF  ST G        QM G
Sbjct: 379 KANMQHRYVELFLNSTAGGTGGAYGSQMMG 408