BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918723|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_G05.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q124R0|TTCA_POLSJ tRNA 2-thiocytidine biosynthesis protein tt...    32   1.8  
sp|O63852|MSHM_SARGL Mitochondrial DNA mismatch repair protein m...    31   4.0  
sp|P18009|IPA4_SHIFL 65.4 kDa antigen OS=Shigella flexneri GN=ip...    31   4.0  

>sp|Q124R0|TTCA_POLSJ tRNA 2-thiocytidine biosynthesis protein ttcA
           OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ttcA
           PE=3 SV=1
          Length = 311

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = -2

Query: 414 STQNLNYKSISRSLL---LKNKTSFQNTVSCIQSLAPT--CEEKTYDFKGDTTSPPSPSL 250
           S +NL  K +   L     K+    +N  S +Q++ P+   + K +DFK   T+  + + 
Sbjct: 226 SQENLQRKQVGNMLREWEKKHSGRLENMFSALQNIVPSHLMDSKRHDFKNIRTTGVADAE 285

Query: 249 GHAKLNSSLFNEPRR 205
           G    ++  F+EP+R
Sbjct: 286 GDKAFDAEEFSEPQR 300


>sp|O63852|MSHM_SARGL Mitochondrial DNA mismatch repair protein mutS
           homolog OS=Sarcophyton glaucum PE=3 SV=1
          Length = 982

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -2

Query: 417 FSTQNLNYKSISRSLLLKNKTSFQNT-VSCIQSLAPTCEEKTYDFKGDTTSPP 262
           +S  NL YK IS    L N+  F N+ + CI+ L+    +       DTT PP
Sbjct: 383 YSELNLRYKDISIFKRLLNQKIFDNSELKCIKDLSSLHRQWAICASSDTTLPP 435


>sp|P18009|IPA4_SHIFL 65.4 kDa antigen OS=Shigella flexneri
           GN=ipaH4.5 PE=1 SV=3
          Length = 574

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 405 NLNYKSISRSLLLKNKTSFQNTVSCIQSLAPTCEEKTYDFKGDTTSPPSPS 253
           NLN      S L+K   SF   +SC+ SL P  +  +  F    T P  PS
Sbjct: 113 NLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPELPS 163

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918723|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_G05.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4Z5U8|Q4Z5U8_PLABE Putative uncharacterized protein (Fragmen...    36   1.3  
tr|B6HT53|B6HT53_PENCH Pc22g13250 protein OS=Penicillium chrysog...    34   3.8  
tr|Q4BYN2|Q4BYN2_CROWT Phenazine biosynthesis PhzC/PhzF protein ...    34   5.0  
tr|Q2S6Z6|Q2S6Z6_HAHCH Transcriptional regulator of sugar metabo...    33   8.3  

>tr|Q4Z5U8|Q4Z5U8_PLABE Putative uncharacterized protein (Fragment)
            OS=Plasmodium berghei GN=PB000517.00.0 PE=4 SV=1
          Length = 2285

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
 Frame = -2

Query: 513  TPMIYLLGLNKEQERLGDSHQLYFLKAILLYVFST---QNLNYKSISRSL------LLKN 361
            TP++++  L         +H+++ L  I++Y+      Q   YK I   L      +LKN
Sbjct: 993  TPLLFITSLPT-------NHKIFKLCKIIIYICENSENQGDTYKIIGTKLYRSIQEILKN 1045

Query: 360  KTSFQNTVSCIQSLAPTCEEKTYDFKGDTTSPPSPS 253
            K    N ++ ++      E+KTY  +GD TSP + S
Sbjct: 1046 KYIINNNIANVKE-----EKKTYHEQGDDTSPTNDS 1076


>tr|B6HT53|B6HT53_PENCH Pc22g13250 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc22g13250 PE=3 SV=1
          Length = 513

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
 Frame = -2

Query: 414 STQNLNYKSISRSLLLKNKTSF--QNTVSCIQSLAPTCEEK--TYDFKGDTTSPPSPSLG 247
           +TQ +NY+  + SL L+  +S   ++  S +  +  +C  K       G+ +S  +P++ 
Sbjct: 112 ATQLMNYRDQNTSLCLETFSSLLLRDLTSALSIIHTSCLAKWRLISIPGENSSVINPTVL 171

Query: 246 HAKLNSSLFNEPRRTLSYPSG*AICKNP*ALTLQPS 139
            A++N  L N+P     +PS     K+    T++P+
Sbjct: 172 LARINEDLSNQPPNQSIHPSSPPSTKSSIQSTIEPT 207


>tr|Q4BYN2|Q4BYN2_CROWT Phenazine biosynthesis PhzC/PhzF protein
           OS=Crocosphaera watsonii GN=CwatDRAFT_1761 PE=4 SV=1
          Length = 305

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -2

Query: 501 YLLGLNKEQERLGDSHQLYFLKAILLYVFSTQNLNYKSISRSLLLKNKTSFQNTVSCIQS 322
           Y+LG+N +     +   + F + + L     +  N + I   L       F N V  I+ 
Sbjct: 83  YVLGINDDLINKNNDVNIIFEEGVGLVAVKIKFENKQPIYTELTSPQLPEFSNKVPSIEE 142

Query: 321 LAPTCEEKTYDFKGDTTSPPSPSLG 247
           LA     K  DF+ D  SP + S G
Sbjct: 143 LASILSLKIEDFREDKYSPQAVSCG 167


>tr|Q2S6Z6|Q2S6Z6_HAHCH Transcriptional regulator of sugar
           metabolism OS=Hahella chejuensis (strain KCTC 2396)
           GN=HCH_06963 PE=4 SV=1
          Length = 258

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
 Frame = -3

Query: 314 QHVRRKHTISREIPLHLPLHH*VMRN------SIALSLMNHEGL 201
           +++  K  I+REI LH+P H  +  N      +IA +LMNH+GL
Sbjct: 77  RNLEEKEAIAREIALHVPDHSSMFINIGTTTETIARALMNHKGL 120