BP918728 [AcEST]

BP918728
Clone id	YMU001_000116_G11
Library	YMU01
Length	539
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000116_G11.
Accession	BP918728
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GGCACGGACTGCAGCAAGCAAGCAAGAGAGCGACTGAGCTAGGCGTGCGCATGCAGCAGC GATCTTGACAGAGCAGAGCAAGGTAAAGAGAAAGAGGCATCTTACATATTGGTGGAGCTA TTTTGATTATGATGGCCACATCGAGCTGTGTAGAGGTAAGAAAAAGAGAAAATAAAGTTG TAAAATTCCATGTTTTGAGTCATGCCACATAGAGGTTTTTTGAGGGGTGAGGTTTCCAAA AGCAAGTTAGCTAAAAAACTCTTTTTGCCTGCAAGCATGCTAGTAAACTAGTCACACACT TTTGAGCATGGTGTCTACATTTATTCCTTCGTCCAGAAGCTTTGGGAAAGTACTTGTCTA AATAATTTGTTGAGAATTGAATAAGCTACGTTCCATTGTTCCTTTCTCTTTGTTGTTGTA AACAGTTGAACTGAGGTACTCGTGGAGTTGCAGGCTCCATATGAGTACGTCAGAGTAGTA CTTGGATGCAAAAAAAAAGAGTCAAGGTGCACGTCTGACACTGACAAAGTGTCAAACAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918728\|Adiantum capillus-veneris mRNA, clone: YMU001_000116_G11. (539 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B3EKR1
Definition	tr\|B3EKR1\|B3EKR1_CHLPB Putative uncharacterized protein OS=Chlorobium phaeobacteroides (strain BS1)
Align length	100
Score (bit)	33.1
E-value	9.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918728\|Adiantum capillus-veneris mRNA, clone: YMU001_000116_G11. (539 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B3EKR1\|B3EKR1_CHLPB Putative uncharacterized protein OS=Chlor... 33 9.5 >tr\|B3EKR1\|B3EKR1_CHLPB Putative uncharacterized protein OS=Chlorobium phaeobacteroides (strain BS1) GN=Cphamn1_1678 PE=4 SV=1 Length = 174 Score = 33.1 bits (74), Expect = 9.5 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 9/100 (9%) Frame = -2 Query: 457 EPATPRVPQFNCLQQQRERNNGTLIQFSTNYLDKYFPK-ASGRRNKCRHHAQKCV--TS 287 +P PR + + Q+E N+GT F++ ++D +F + A R +K ++ + Sbjct: 57 DPENPRAQEKGLKKFQKELNDGTLSSTFASKFIDSFFYRWAEDRLSKTIYYLNLVTLESE 116 Query: 286 LLACLQAKRVFLTCF------WKPHPSKNLYVA*LKTWN 185 LL L + L+ W+ HP +N V ++TWN Sbjct: 117 LLPNLSDEIAGKLSPSGKSSPRWQRHPVQNCQVFNIQTWN 156