BP918732 |
Clone id |
YMU001_000116_H03 |
Library |
YMU01 |
Length |
466 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000116_H03. |
Accession |
BP918732 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1966Contig1 |
Sequence |
GACTGTGTTATCTGTTTGTCAGAGCTGCGAGATACGACAGTGCTTCCTTGCAGACACATG TGTATGTGCAGCGCATGTGCGAAAGTACTGAGGTTCCAATCTAGCCGTTGCCCCATCTGC AGAACACCAGTGGAGAGGCTTCTTGAGATCAAGGTTTCCAACAGGGATCAAGACAAGGGG ACAGCATGGTCCAAGACACCAGATTAGGGGTCCTGCCAACTTTTGCTATTCTTCCTTTTT TGGGGCAAATTATTGTACCAACATTACTGGATTGTCTATTGTCATGTACCATTTGAGACG ACTTGCTATTGAGCTTCAGGATAAGAAGGATAGTCCACACTTGCGTACAATGCTTCAAGC TGAGGATGCCAAGGACATAAGAAGAAATTGATTGCTACTTCTTACATCGCATTTTGACAT GGTAAAATGGTGTAGGGACCTAGTTTGTACCCGATGCATCCATGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6INH1 |
Definition |
sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis |
Align length |
55 |
Score (bit) |
83.6 |
E-value |
4.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8RUJ8 |
Definition |
tr|Q8RUJ8|Q8RUJ8_ORYSJ Os10g0204100 protein OS=Oryza sativa subsp. japonica |
Align length |
59 |
Score (bit) |
107.0 |
E-value |
4.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918732|Adiantum capillus-veneris mRNA, clone: YMU001_000116_H03. (466 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8RUJ8|Q8RUJ8_ORYSJ Os10g0204100 protein OS=Oryza sativa subs... 107 4e-22 tr|B8BG37|B8BG37_ORYSI Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|A3C3D3|A3C3D3_ORYSJ Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|Q10NY0|Q10NY0_ORYSJ cDNA clone:J023020P04, full insert sequen... 106 5e-22 tr|Q0DTD5|Q0DTD5_ORYSJ Os03g0254900 protein (Fragment) OS=Oryza ... 106 5e-22 tr|A3ABI1|A3ABI1_ORYSJ Putative uncharacterized protein OS=Oryza... 106 5e-22 tr|A2XEN7|A2XEN7_ORYSI Putative uncharacterized protein OS=Oryza... 106 5e-22 tr|A9SWZ9|A9SWZ9_PHYPA Predicted protein OS=Physcomitrella paten... 106 7e-22 tr|B3U2B1|B3U2B1_CUCSA Zinc finger RING-type protein OS=Cucumis ... 105 1e-21 tr|A7PT26|A7PT26_VITVI Chromosome chr8 scaffold_29, whole genome... 104 2e-21 tr|A5B9W9|A5B9W9_VITVI Putative uncharacterized protein OS=Vitis... 104 2e-21 tr|Q9S752|Q9S752_ARATH Putative uncharacterized protein F11F8.36... 103 3e-21 tr|A7NZI3|A7NZI3_VITVI Chromosome chr6 scaffold_3, whole genome ... 103 6e-21 tr|Q9LFH6|Q9LFH6_ARATH Putative uncharacterized protein F4P12_11... 102 1e-20 tr|A9SCV6|A9SCV6_PHYPA Predicted protein (Fragment) OS=Physcomit... 102 1e-20 tr|Q2HV40|Q2HV40_MEDTR Zinc finger, RING-type OS=Medicago trunca... 99 8e-20 tr|A9NUZ8|A9NUZ8_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19 tr|A9NRJ5|A9NRJ5_PICSI Putative uncharacterized protein OS=Picea... 97 3e-19 tr|Q9M8K4|Q9M8K4_ARATH Putative RING zinc finger protein OS=Arab... 93 8e-18 tr|Q9LYW5|Q9LYW5_ARATH Putative uncharacterized protein F15A17_2... 93 8e-18 tr|Q8LA32|Q8LA32_ARATH Putative RING zinc finger protein (At3g06... 93 8e-18 tr|Q8L8P7|Q8L8P7_ARATH Putative RING zinc finger protein OS=Arab... 93 8e-18 tr|Q8GZ27|Q8GZ27_ARATH Putative uncharacterized protein At5g0320... 93 8e-18 tr|Q75HV4|Q75HV4_ORYSJ Putative uncharacterized protein OSJNBb00... 92 1e-17 tr|A7NWF8|A7NWF8_VITVI Chromosome chr5 scaffold_2, whole genome ... 92 1e-17 tr|A3B3T0|A3B3T0_ORYSJ Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|A2Y4E4|A2Y4E4_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|Q94E82|Q94E82_ORYSJ Mahogunin, ring finger 1-like protein (Os... 89 8e-17 tr|B8A897|B8A897_ORYSI Putative uncharacterized protein OS=Oryza... 89 8e-17 tr|A2ZTA9|A2ZTA9_ORYSJ Putative uncharacterized protein OS=Oryza... 89 8e-17
>tr|Q8RUJ8|Q8RUJ8_ORYSJ Os10g0204100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0004P12.16 PE=4 SV=1 Length = 425
Score = 107 bits (266), Expect = 4e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 342 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLEIKVNNKGEEQ 400
>tr|B8BG37|B8BG37_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32999 PE=4 SV=1 Length = 425
Score = 107 bits (266), Expect = 4e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 342 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLEIKVNNKGEEQ 400
>tr|A3C3D3|A3C3D3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029805 PE=4 SV=1 Length = 426
Score = 107 bits (266), Expect = 4e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 343 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLEIKVNNKGEEQ 401
>tr|Q10NY0|Q10NY0_ORYSJ cDNA clone:J023020P04, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g15000 PE=2 SV=1 Length = 430
Score = 106 bits (265), Expect = 5e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 338 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTTRCPICRQPVERLLEIKVNNKAEEQ 396
>tr|Q0DTD5|Q0DTD5_ORYSJ Os03g0254900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0254900 PE=4 SV=1 Length = 481
Score = 106 bits (265), Expect = 5e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 389 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTTRCPICRQPVERLLEIKVNNKAEEQ 447
>tr|A3ABI1|A3ABI1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008153 PE=4 SV=1 Length = 290
Score = 106 bits (265), Expect = 5e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 198 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTTRCPICRQPVERLLEIKVNNKAEEQ 256
>tr|A2XEN7|A2XEN7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10798 PE=4 SV=1 Length = 240
Score = 106 bits (265), Expect = 5e-22 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDK 177 +CVICLSE RDTTVLPCRHMCMCS CAKVLR+Q++RCPICR PVERLLEIKV+N+ +++ Sbjct: 148 ECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTTRCPICRQPVERLLEIKVNNKAEEQ 206
>tr|A9SWZ9|A9SWZ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_216589 PE=4 SV=1 Length = 414
Score = 106 bits (264), Expect = 7e-22 Identities = 47/62 (75%), Positives = 53/62 (85%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQDKG 180 +CV+C+SE RDTTVLPCRHMCMCS CAKVLRFQ++RCPICRTPVERLLEIKV + G Sbjct: 311 ECVVCMSEPRDTTVLPCRHMCMCSECAKVLRFQTNRCPICRTPVERLLEIKVPKTGAEHG 370
Query: 181 TA 186 A Sbjct: 371 GA 372
>tr|B3U2B1|B3U2B1_CUCSA Zinc finger RING-type protein OS=Cucumis sativus PE=4 SV=1 Length = 300
Score = 105 bits (262), Expect = 1e-21 Identities = 46/58 (79%), Positives = 53/58 (91%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQD 174 +CVICLSE RDTTVLPCRHMCMCS CAKVLRFQ++RCPICR PV+RLLEI+VSN ++ Sbjct: 242 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVDRLLEIRVSNGPEE 299
>tr|A7PT26|A7PT26_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023187001 PE=4 SV=1 Length = 272
Score = 104 bits (260), Expect = 2e-21 Identities = 48/58 (82%), Positives = 50/58 (86%) Frame = +1
Query: 1 DCVICLSELRDTTVLPCRHMCMCSACAKVLRFQSSRCPICRTPVERLLEIKVSNRDQD 174 +CVICLSE RDTTVLPCRHMCMCS CAKVLRFQ+ RCPICR VERLLEIKVSN D Sbjct: 215 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTDRCPICRQLVERLLEIKVSNGSDD 272
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