BP918735
Clone id YMU001_000116_H06
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000116_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTCAAATAAAAATTGTTCATATTACCACCCGCCTTGTGATCTACTGACTTTGCTACACTT
CTATACCAGCCTGTGATGAATGTAAAGCATACACCCAAGAGGTTTATTGAATTCTTAACC
TAAATTCGAGTTCTTTGGACAACTTTTCCACAGCCGCTCTACTTCAACCTTCGGTCTTGT
GCTTCCACCAATCGAGAAACCTCAAATTCGTATCCATGCAATCAATCTTATGTAGACCGT
AAGCGAGCCTGGCACCCTCTTCTGCTACGCTCCATCCAACAATCGCACCCGCCACAAGTG
AAAGTAGTAATCCATGTGGAGCCCTTGAATATCTTGCCGCCACAGCTGTTGTAGTTAGCC
CTCCAACAACAGCTCCTCCCGCTGATATCTTTGCTGCTTCTCTAACAAGCTTTAACTGGG
GTCCATAAACTGGATCGGAGTGA
■■Homology search results ■■ -
sp_hit_id Q7N577
Definition sp|Q7N577|LUXC_PHOLL Acyl-CoA reductase OS=Photorhabdus luminescens subsp. laumondii
Align length 41
Score (bit) 33.1
E-value 0.53
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918735|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_H06.
(443 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7N577|LUXC_PHOLL Acyl-CoA reductase OS=Photorhabdus luminesc... 33 0.53
sp|Q5R989|MTMRC_PONAB Myotubularin-related protein 12 OS=Pongo a... 32 0.90
sp|Q9C0I1|MTMRC_HUMAN Myotubularin-related protein 12 OS=Homo sa... 32 0.90
sp|P23113|LUXC_PHOLU Acyl-CoA reductase OS=Photorhabdus luminesc... 30 3.4
sp|Q5FVM6|MTMRC_RAT Myotubularin-related protein 12 OS=Rattus no... 29 7.7
sp|Q80TA6|MTMRC_MOUSE Myotubularin-related protein 12 OS=Mus mus... 29 7.7
sp|Q49420|CSD_MYCGE Probable cysteine desulfurase OS=Mycoplasma ... 29 10.0

>sp|Q7N577|LUXC_PHOLL Acyl-CoA reductase OS=Photorhabdus luminescens
subsp. laumondii GN=luxC PE=3 SV=1
Length = 480

Score = 33.1 bits (74), Expect = 0.53
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3

Query: 195 SIGGSTRPKVEVERLWKSCPKNSNLG*EFNKPLGCMLYIHH 73
S+ + +V+V + W SN G EFN+PLG +Y+HH
Sbjct: 339 SLFAGLKVEVDVHQRWMII--ESNAGVEFNQPLGRCVYLHH 377


>sp|Q5R989|MTMRC_PONAB Myotubularin-related protein 12 OS=Pongo
abelii GN=MTMR12 PE=2 SV=1
Length = 747

Score = 32.3 bits (72), Expect = 0.90
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2

Query: 125 FEFFGQLFHSRSTSTFGLVLPPIEKPQIRIHA 220
F F +HS+ST GL+LP IE P+I++ A
Sbjct: 609 FREFYDSWHSKSTDYHGLLLPHIEGPEIKVWA 640


>sp|Q9C0I1|MTMRC_HUMAN Myotubularin-related protein 12 OS=Homo
sapiens GN=MTMR12 PE=1 SV=2
Length = 747

Score = 32.3 bits (72), Expect = 0.90
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2

Query: 125 FEFFGQLFHSRSTSTFGLVLPPIEKPQIRIHA 220
F F +HS+ST GL+LP IE P+I++ A
Sbjct: 609 FREFYDSWHSKSTDYHGLLLPHIEGPEIKVWA 640


>sp|P23113|LUXC_PHOLU Acyl-CoA reductase OS=Photorhabdus luminescens
GN=luxC PE=3 SV=2
Length = 480

Score = 30.4 bits (67), Expect = 3.4
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3

Query: 171 KVEVERLWKSCPKNSNLG*EFNKPLGCMLYIHH 73
KVEV+ + SN G E N+PLG +Y+HH
Sbjct: 345 KVEVDVHQRWMVIESNAGVELNQPLGRCVYLHH 377


>sp|Q5FVM6|MTMRC_RAT Myotubularin-related protein 12 OS=Rattus
norvegicus GN=Mtmr12 PE=2 SV=2
Length = 748

Score = 29.3 bits (64), Expect = 7.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2

Query: 128 EFFGQLFHSRSTSTFGLVLPPIEKPQIRIHA 220
EF+ +HS+ T GL+LP IE P+I++ A
Sbjct: 612 EFYDN-WHSKPTDYHGLLLPHIEGPEIKVWA 641


>sp|Q80TA6|MTMRC_MOUSE Myotubularin-related protein 12 OS=Mus
musculus GN=Mtmr12 PE=2 SV=2
Length = 747

Score = 29.3 bits (64), Expect = 7.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2

Query: 134 FGQLFHSRSTSTFGLVLPPIEKPQIRIHA 220
F +HS+ T GL+LP IE P+I++ A
Sbjct: 612 FYDSWHSKPTDYHGLLLPHIEGPEIKVWA 640


>sp|Q49420|CSD_MYCGE Probable cysteine desulfurase OS=Mycoplasma
genitalium GN=csd PE=3 SV=1
Length = 408

Score = 28.9 bits (63), Expect = 10.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2

Query: 232 HKIDCMDTNLRFLDWWKHKTEG*SRAAVEKLSKELEFRLR 113
HKID N+ FL + HK G + + + EL+ RL+
Sbjct: 207 HKIDITSANIDFLTFSTHKFYGPTGLGIAFIKSELQSRLK 246


tr_hit_id A9U0W1
Definition tr|A9U0W1|A9U0W1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 89
Score (bit) 94.4
E-value 3.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918735|Adiantum capillus-veneris mRNA, clone:
YMU001_000116_H06.
(443 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9U0W1|A9U0W1_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18
tr|A9S3M4|A9S3M4_PHYPA Predicted protein OS=Physcomitrella paten... 87 5e-16
tr|A9NQR3|A9NQR3_PICSI Putative uncharacterized protein OS=Picea... 80 4e-14
tr|Q6ZCC4|Q6ZCC4_ORYSJ Os08g0112800 protein OS=Oryza sativa subs... 75 2e-12
tr|A2YQL0|A2YQL0_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12
tr|B8A3B3|B8A3B3_MAIZE Putative uncharacterized protein OS=Zea m... 74 3e-12
tr|B4FL77|B4FL77_MAIZE Putative uncharacterized protein OS=Zea m... 74 3e-12
tr|Q941A6|Q941A6_ARATH At1g08480/T27G7_10 OS=Arabidopsis thalian... 74 5e-12
tr|A9NM90|A9NM90_PICSI Putative uncharacterized protein OS=Picea... 72 1e-11
tr|A7Q1H5|A7Q1H5_VITVI Chromosome chr7 scaffold_44, whole genome... 72 2e-11
tr|A9P8C2|A9P8C2_POPTR Putative uncharacterized protein OS=Popul... 59 9e-08
tr|Q1EMM1|Q1EMM1_PLAMJ Putative uncharacterized protein (Fragmen... 52 1e-05
tr|A3RVW5|A3RVW5_RALSO Hypothetical cytosolic protein OS=Ralston... 35 1.4
tr|Q013F8|Q013F8_OSTTA Ubiquitin system component Cue domain-con... 34 4.1
tr|B8BRV4|B8BRV4_THAPS Predicted protein OS=Thalassiosira pseudo... 34 4.1
tr|B8APW6|B8APW6_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.1
tr|Q93CP6|Q93CP6_PHOLU Fatty acid reductase OS=Photorhabdus lumi... 33 7.0
tr|Q15ZB3|Q15ZB3_PSEA6 UDP-N-acetylmuramate OS=Pseudoalteromonas... 33 9.2
tr|Q56817|Q56817_PHOLU Fatty acid reductase OS=Photorhabdus lumi... 33 9.2
tr|A9SSJ0|A9SSJ0_PHYPA Predicted protein OS=Physcomitrella paten... 33 9.2

>tr|A9U0W1|A9U0W1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_110635 PE=4 SV=1
Length = 141

Score = 94.4 bits (233), Expect = 3e-18
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -2

Query: 442 HSDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVA 263
+SDPVYGPQLKLVR+ A I+ RYS+ G + + + GA + W+VA
Sbjct: 51 NSDPVYGPQLKLVRQGATIANVGALVGGLATAGIALRYSKNLPGAVGAFLGGAAMSWAVA 110

Query: 262 EEGARLAYGLHKIDCMDTNLRFLDWWKHK 176
EEGA L GL+K +CMDTNLRFLDWW+ K
Sbjct: 111 EEGANLGLGLYKFNCMDTNLRFLDWWERK 139


>tr|A9S3M4|A9S3M4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_162641 PE=4 SV=1
Length = 141

Score = 86.7 bits (213), Expect = 5e-16
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGP+LK VR+ A I+ RYS+ G L + + G + W+VAE
Sbjct: 52 SDPVYGPRLKQVRQGATIANYGALVGGLATAGVAFRYSKNIPGALGAFLGGTAMSWAVAE 111

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHK 176
EGA A GL+K +CMD NL+FLDWW+ K
Sbjct: 112 EGANFALGLYKFNCMDVNLKFLDWWERK 139


>tr|A9NQR3|A9NQR3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 149

Score = 80.5 bits (197), Expect = 4e-14
Identities = 41/91 (45%), Positives = 51/91 (56%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGPQLKL R+AAKI+ +YSR G +LS AGA GW +
Sbjct: 57 SDPVYGPQLKLTRQAAKIAATGSVIGAVSTAGVSWKYSRHGIGAILSFGAGAAFGWVFGK 116

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A L+K D MD L+F +WW+ K+EG
Sbjct: 117 EIANHTLRLYKFDSMDAQLKFFEWWEKKSEG 147


>tr|Q6ZCC4|Q6ZCC4_ORYSJ Os08g0112800 protein OS=Oryza sativa subsp.
japonica GN=P0498H04.25 PE=2 SV=1
Length = 142

Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/91 (42%), Positives = 50/91 (54%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGPQLK +RE+ K + +YS+APHG++L+ GAI G V
Sbjct: 48 SDPVYGPQLKAMRESRKFALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGS 107

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A Y L+K D NLRF+ WW+ K G
Sbjct: 108 EVAEHWYQLYKTDKQGANLRFIYWWEDKVAG 138


>tr|A2YQL0|A2YQL0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_27576 PE=4 SV=1
Length = 142

Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/91 (42%), Positives = 50/91 (54%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGPQLK +RE+ K + +YS+APHG++L+ GAI G V
Sbjct: 48 SDPVYGPQLKAMRESRKFALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGS 107

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A Y L+K D NLRF+ WW+ K G
Sbjct: 108 EVAEHWYQLYKTDKQGANLRFIYWWEDKVAG 138


>tr|B8A3B3|B8A3B3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 141

Score = 74.3 bits (181), Expect = 3e-12
Identities = 38/91 (41%), Positives = 51/91 (56%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGPQLK +RE+ K + +YS+APHG+LL+ GAI G +
Sbjct: 48 SDPVYGPQLKALRESRKFALAGALVGAAHLGGVALKYSKAPHGVLLATGFGAITGAVLGS 107

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A Y L+++D NLRF+ WW+ K G
Sbjct: 108 EVADHWYQLYEMDKQGANLRFIYWWEDKVSG 138


>tr|B4FL77|B4FL77_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 141

Score = 74.3 bits (181), Expect = 3e-12
Identities = 38/91 (41%), Positives = 51/91 (56%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGPQLK +RE+ K + +YS+APHG+LL+ GAI G +
Sbjct: 48 SDPVYGPQLKALRESRKFALAGALVGAAHLGGVALKYSKAPHGVLLATGFGAITGAVLGS 107

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A Y L+++D NLRF+ WW+ K G
Sbjct: 108 EVADHWYQLYEMDKQGANLRFIYWWEDKVSG 138


>tr|Q941A6|Q941A6_ARATH At1g08480/T27G7_10 OS=Arabidopsis thaliana
GN=At1g08480 PE=2 SV=1
Length = 142

Score = 73.6 bits (179), Expect = 5e-12
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPV+GP LK REA +YSR+PHG LS + G + GW+ +
Sbjct: 53 SDPVHGPTLKTAREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQ 112

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTE 170
E A L+K+D M ++F++WW+ K++
Sbjct: 113 EVANHTLQLYKLDTMAAQVKFMEWWERKSQ 142


>tr|A9NM90|A9NM90_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 147

Score = 72.0 bits (175), Expect = 1e-11
Identities = 39/91 (42%), Positives = 49/91 (53%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGPQL R+AAKI+ +YSR G +LS AGA GW +
Sbjct: 57 SDPVYGPQL--TRQAAKIAATGSVIGAVSTAGVSWKYSRHGIGAILSFGAGAAFGWVFGK 114

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A L+K D MD L+F +WW+ K+EG
Sbjct: 115 EIANHTLRLYKFDSMDAQLKFFEWWEKKSEG 145


>tr|A7Q1H5|A7Q1H5_VITVI Chromosome chr7 scaffold_44, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028466001
PE=4 SV=1
Length = 146

Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/91 (37%), Positives = 49/91 (53%)
Frame = -2

Query: 439 SDPVYGPQLKLVREAAKISXXXXXXXXXXXXXXXARYSRAPHGLLLSLVAGAIVGWSVAE 260
SDPVYGP L+ REAAK + +YSR+PHG LS AG + G + +
Sbjct: 54 SDPVYGPTLRTTREAAKFAVAGAVIGAVSTAAVSWKYSRSPHGAALSFAAGGVFGVTFGQ 113

Query: 259 EGARLAYGLHKIDCMDTNLRFLDWWKHKTEG 167
E A L+++D + ++FL+WW+ K G
Sbjct: 114 EFASHWLQLYRLDTLGAEVKFLEWWERKIGG 144