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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918741
Clone id YMU001_000117_A01
Library
Length 464
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACTGGCAGAGTGCCGTCGACAGCAAATGTGGGCTGTTTCCCTTTCTGAAAGCGAACATCA
TGGCCAATGTGCTTGGCATTTGGCCAATGTCCTGCGCTGTAGGTGATTTTTGCTGATCTT
CTTTTCAGTTGTGCCTAGTAGAAAGACTTGAAAAGCAGAGAGCATTAAGGATTGGTAATG
ATCTAGTGATGCAAAGCTCCCAAAGAGGAAAACTTGATATGATAGTGCCTGCTAATTAGC
TGACTATGCAGAGTTTCCAAGTAGACTGGTTAAGTAGGTAATGAAGTGGAATACCATAGA
AGCTGTGTTCCCCCAAACATGAAGTCTAGTTTGGTTGTGTATTTTAATGCAATCCCTTAG
TACATACTGGTAGTGATTTAGGATTGAGGGTGAGGAGAGTGAAGCTGGGATTGTTAAGTC
CAGCATTGTAAATTTGTTTTGCCCACAAATGTATAAATATGTAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918741|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_A01.
         (464 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B3LA39
Definition tr|B3LA39|B3LA39_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H)
Align length 67
Score (bit) 33.1
E-value 7.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918741|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_A01.
         (464 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3LA39|B3LA39_PLAKH Putative uncharacterized protein OS=Plasm...    33   7.0  
tr|Q7QH74|Q7QH74_ANOGA AGAP004037-PA (Fragment) OS=Anopheles gam...    33   9.1  

>tr|B3LA39|B3LA39_PLAKH Putative uncharacterized protein OS=Plasmodium
            knowlesi (strain H) GN=PKH_126850 PE=4 SV=1
          Length = 2730

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = -3

Query: 459  YLYICGQNKFTMLDLTIPASLSSPSILNHYQYVLRDCIKIHNQTRLHVWGNTASMVFHFI 280
            Y Y  G++K+ + +  +   +  PS  +H    L+   K H    L++  N A    H +
Sbjct: 1389 YSYQFGEDKYIVENRKMATLMEDPSRFHHLSDNLQGIYKYHADKDLYIHNNKAEFAAHLL 1448

Query: 279  TYLTSLL 259
             Y + LL
Sbjct: 1449 MYPSKLL 1455


>tr|Q7QH74|Q7QH74_ANOGA AGAP004037-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP004037 PE=4 SV=3
          Length = 163

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 72  AHWP*CSLSERETAHICCRRH 10
           +HWP C+L   E A ICCR H
Sbjct: 100 SHWPRCALMNGEFAGICCRMH 120