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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918744
Clone id YMU001_000117_A05
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGTTACAAATGATGGTTAGCAACTGGTCATACATGAATGTAGCACCGACTTATGGCAGCT
ATTGAAACATCTTGGAATGATCAGAGTGTACAATTCTTCACATACGGTGCCAACCCAAGA
CTTCCCTCAAGAATATCAAAATCGAGAGAGAGAGAGAGAGAGAGACTACAACCAAAAAAT
TTCGAAGATGTGCCTCATGTGACACGGTATCAGACTCGCCTTCATGTAACATGGTATCAG
TCTCATCTTCATGAATTTGCATCGACTACCCATTGCTGCCTCTGACTGAAGCTATGGTCT
CCATGGGTTCAGATGACCCTGCACCGCCACTTCCACCGTATGTGATATCACTCATGGCCT
CAACGGGCTCCGTGCCTCGATCACTAGCACTAAGCACATCTGGAGATGGCTCATTTTCAC
CTCTACTGGTGTCAAAAGTCCTCAAAGCCTCCCGC
■■Homology search results ■■ -
sp_hit_id P22265
Definition sp|P22265|TSH_DROME Protein teashirt OS=Drosophila melanogaster
Align length 36
Score (bit) 34.7
E-value 0.18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918744|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_A05.
         (436 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22265|TSH_DROME Protein teashirt OS=Drosophila melanogaster ...    35   0.18 
sp|A1BDW8|Y538_CHLPD UPF0082 protein Cpha266_0538 OS=Chlorobium ...    33   0.68 
sp|P43363|MAGAA_HUMAN Melanoma-associated antigen 10 OS=Homo sap...    32   0.86 
sp|A4SG34|Y1432_PROVI UPF0082 protein Cvib_1432 OS=Prosthecochlo...    31   2.0  
sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN...    31   2.6  
sp|Q3AU82|Y165_CHLCH UPF0082 protein Cag_0165 OS=Chlorobium chlo...    30   3.4  
sp|Q5XIQ4|MGRN1_RAT Probable E3 ubiquitin-protein ligase MGRN1 O...    30   4.3  
sp|Q9VP05|MED1_DROME Mediator of RNA polymerase II transcription...    30   4.3  
sp|Q5J2D6|GGNB1_RAT Gametogenetin-binding protein 1 OS=Rattus no...    30   4.4  
sp|Q6XHA6|ROC10_DICDI Probable inactive serine/threonine-protein...    30   5.6  
sp|Q5VWT5|CA168_HUMAN Uncharacterized protein C1orf168 OS=Homo s...    30   5.6  
sp|P49848|TAF6_HUMAN Transcription initiation factor TFIID subun...    29   7.3  
sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepid...    29   7.5  
sp|Q3B7U2|TAF1A_RAT TATA box-binding protein-associated factor R...    29   7.5  
sp|P19622|HME2_HUMAN Homeobox protein engrailed-2 OS=Homo sapien...    29   7.5  
sp|P0C0L5|CO4B_HUMAN Complement C4-B OS=Homo sapiens GN=C4B PE=1...    29   9.6  
sp|P0C0L4|CO4A_HUMAN Complement C4-A OS=Homo sapiens GN=C4A PE=1...    29   9.6  
sp|Q54LN2|VP13D_DICDI Putative vacuolar protein sorting-associat...    29   9.8  
sp|Q9LM33|MPK8_ARATH Mitogen-activated protein kinase 8 OS=Arabi...    29   9.8  

>sp|P22265|TSH_DROME Protein teashirt OS=Drosophila melanogaster
           GN=tsh PE=1 SV=2
          Length = 954

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 403 PDVLSASDRGTEPVEAMSDITYGGSGGAGSSEPMET 296
           PD  S +D   +P+E MSDI  GG+ G G+ E M +
Sbjct: 256 PDWNSKNDLVVDPLEKMSDIVKGGASGMGTKEKMHS 291


>sp|A1BDW8|Y538_CHLPD UPF0082 protein Cpha266_0538 OS=Chlorobium
           phaeobacteroides (strain DSM 266) GN=Cpha266_0538 PE=3
           SV=1
          Length = 250

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -1

Query: 433 DTSRGENEPSPDVLSASDRGTEPVEAMS--DITYGGSGGAGSSEPMETIASVR 281
           DT+R  + P  ++L A  +GT  +E ++  +ITY G G AG +  +ET    R
Sbjct: 54  DTARSNSMPMENILRAVKKGTGELEGVTYDEITYEGYGPAGIALIIETATDNR 106


>sp|P43363|MAGAA_HUMAN Melanoma-associated antigen 10 OS=Homo
           sapiens GN=MAGEA10 PE=2 SV=1
          Length = 369

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 21/51 (41%), Positives = 25/51 (49%)
 Frame = +3

Query: 267 YPLLPLTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLALSTSGDGSFS 419
           YPL+P T   VS    D   P PP    +  S+ SV  SL L  S +GS S
Sbjct: 64  YPLIPSTPEEVSA---DDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSS 111


>sp|A4SG34|Y1432_PROVI UPF0082 protein Cvib_1432 OS=Prosthecochloris
           vibrioformis (strain DSM 265) (strain DSM 265)
           GN=Cvib_1432 PE=3 SV=1
          Length = 250

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -1

Query: 433 DTSRGENEPSPDVLSASDRGTEPVEAMS--DITYGGSGGAGSSEPMET 296
           DT+R  + P  ++  A  +GT  +E +S  +ITY G G AG +  +ET
Sbjct: 54  DTARSNSMPMDNIQRAIKKGTGELEGVSYDEITYEGYGPAGIALIIET 101


>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens
            GN=ZNF536 PE=1 SV=3
          Length = 1300

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = -1

Query: 433  DTSRGENEPSPDVLSASDRGTEPVEAMSDITYGGSGGA----GSSEPMETIAS 287
            D+S+GEN    DV +  +  T+P+ A+S  +    G +    G+S+P++ + S
Sbjct: 1171 DSSKGENNDEEDVETEPEMMTKPLSALSKDSSSDGGDSLQPTGTSQPVQGLVS 1223


>sp|Q3AU82|Y165_CHLCH UPF0082 protein Cag_0165 OS=Chlorobium
           chlorochromatii (strain CaD3) GN=Cag_0165 PE=3 SV=2
          Length = 250

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 433 DTSRGENEPSPDVLSASDRGTEPVEAMS--DITYGGSGGAGSSEPMETIASVR 281
           DT+R  + P  ++  A  +GT  ++ +S  +ITY G G AG +  +ET    R
Sbjct: 54  DTARSNSMPMDNIQRAIKKGTGELDGVSWDEITYEGYGPAGIALIIETATDNR 106


>sp|Q5XIQ4|MGRN1_RAT Probable E3 ubiquitin-protein ligase MGRN1
           OS=Rattus norvegicus GN=Mgrn1 PE=2 SV=1
          Length = 533

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 270 PLLPLTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLALSTSGDGS 413
           P  P+ E      S+DP  PLPP  + L+    S P S      G+ S
Sbjct: 437 PSSPIHEEDEEKLSEDPEAPLPPSGVELVLQESSSPESFGTEEVGEPS 484


>sp|Q9VP05|MED1_DROME Mediator of RNA polymerase II transcription
            subunit 1 OS=Drosophila melanogaster GN=MED1 PE=1 SV=2
          Length = 1475

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = +3

Query: 282  LTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLAL----STSGDGSFS 419
            L  +  S+G+  P PP+PP    L +S+GS+  S +L    ++S  GS S
Sbjct: 935  LVRSFASVGAPPPPPPIPP----LASSSGSISSSQSLKKEKTSSASGSSS 980


>sp|Q5J2D6|GGNB1_RAT Gametogenetin-binding protein 1 OS=Rattus
           norvegicus GN=Ggnbp1 PE=2 SV=1
          Length = 373

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -1

Query: 427 SRGENEPSPDVLSASDRGTEPVEAMSDITYGGSGGAGSSEPMETIASVRGSNG 269
           S+G ++ S   L+ S   + P + +   T G  GG G  E    + S   SNG
Sbjct: 28  SKGSSKSSNRPLNRSQPSSSPEQDVVSPTMGHQGGCGRKETRPRVLSATSSNG 80


>sp|Q6XHA6|ROC10_DICDI Probable inactive serine/threonine-protein
           kinase roco10 OS=Dictyostelium discoideum GN=roco10 PE=3
           SV=1
          Length = 2646

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 324 PPLPPYVISLMASTGSVPRSLALSTSGDGSFS 419
           PPL P  IS  ++ G V  S++L+ SG G ++
Sbjct: 229 PPLSPIKISSTSAAGDVSPSISLNNSGSGIYN 260
tr_hit_id Q9BI26
Definition tr|Q9BI26|Q9BI26_DROAN Yellow protein (Fragment) OS=Drosophila ananassae
Align length 47
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918744|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_A05.
         (436 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9BI26|Q9BI26_DROAN Yellow protein (Fragment) OS=Drosophila a...    35   1.4  
tr|B3MSD8|B3MSD8_DROAN Yellow OS=Drosophila ananassae GN=Dana\y ...    35   1.4  
tr|B4KJA2|B4KJA2_DROMO GI17699 OS=Drosophila mojavensis GN=GI176...    35   2.4  
tr|B0DB66|B0DB66_LACBS Predicted protein OS=Laccaria bicolor (st...    35   2.4  
tr|B4LSD7|B4LSD7_DROVI GJ11344 OS=Drosophila virilis GN=GJ11344 ...    34   3.2  
tr|B2RAE8|B2RAE8_HUMAN cDNA, FLJ94870, highly similar to Homo sa...    34   3.2  
tr|B5JG02|B5JG02_9BACT ParB-like nuclease domain family OS=Verru...    34   4.1  
tr|B4P6F8|B4P6F8_DROYA GE12928 OS=Drosophila yakuba GN=GE12928 P...    34   4.1  
tr|A9VZA5|A9VZA5_METEP Osmosensitive K channel His kinase sensor...    33   9.2  
tr|A8JBY4|A8JBY4_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   9.2  
tr|A8IIC2|A8IIC2_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   9.2  
tr|B3NKR3|B3NKR3_DROER GG21347 OS=Drosophila erecta GN=GG21347 P...    33   9.2  

>tr|Q9BI26|Q9BI26_DROAN Yellow protein (Fragment) OS=Drosophila
           ananassae GN=y PE=3 SV=1
          Length = 543

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 270 PLLPLTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLALSTSGDG 410
           P+LP  +   S  S  PAPPLPP    L AS+G V  S+++ST+  G
Sbjct: 441 PVLP-QKPQTSWTSSPPAPPLPPSRTYLPASSGPVVSSVSVSTNTVG 486


>tr|B3MSD8|B3MSD8_DROAN Yellow OS=Drosophila ananassae GN=Dana\y
           PE=4 SV=1
          Length = 546

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 270 PLLPLTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLALSTSGDG 410
           P+LP  +   S  S  PAPPLPP    L AS+G V  S+++ST+  G
Sbjct: 441 PVLP-QKPQTSWTSSPPAPPLPPSRTYLPASSGPVVSSVSVSTNTVG 486


>tr|B4KJA2|B4KJA2_DROMO GI17699 OS=Drosophila mojavensis GN=GI17699
           PE=4 SV=1
          Length = 987

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = -1

Query: 403 PDVLSASDRGTEPVEAMSDITYGGSGGAGSS 311
           PD    +D   +P+E MSDI  GG+GG GSS
Sbjct: 243 PDWNGKNDLVVDPLEKMSDIVKGGAGGGGSS 273


>tr|B0DB66|B0DB66_LACBS Predicted protein OS=Laccaria bicolor (strain
            S238N-H82) GN=LACBIDRAFT_294445 PE=4 SV=1
          Length = 981

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 279  PLTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLALSTSGDG 410
            P + A +S  SDD   P  P  I+  A   SVP+S+ L+  GDG
Sbjct: 913  PTSPASLSQNSDDDTGPFTPMTIAC-AEEASVPKSVELAVDGDG 955


>tr|B4LSD7|B4LSD7_DROVI GJ11344 OS=Drosophila virilis GN=GJ11344
           PE=4 SV=1
          Length = 986

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -1

Query: 403 PDVLSASDRGTEPVEAMSDITYGGSGGAGSS 311
           PD    +D   +P+E MSDI  GG GG GSS
Sbjct: 243 PDWNGKNDLVVDPLEKMSDIVKGGGGGGGSS 273


>tr|B2RAE8|B2RAE8_HUMAN cDNA, FLJ94870, highly similar to Homo
           sapiens melanoma antigen, family A, 10 (MAGEA10), mRNA
           OS=Homo sapiens PE=2 SV=1
          Length = 369

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/51 (43%), Positives = 26/51 (50%)
 Frame = +3

Query: 267 YPLLPLTEAMVSMGSDDPAPPLPPYVISLMASTGSVPRSLALSTSGDGSFS 419
           YPL+P T   VS    D A P PP    +  S+ SV  SL L  S +GS S
Sbjct: 64  YPLIPSTPEEVSA---DDATPNPPQSAQIACSSPSVVASLPLDQSDEGSSS 111


>tr|B5JG02|B5JG02_9BACT ParB-like nuclease domain family
           OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_2550
           PE=4 SV=1
          Length = 282

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -1

Query: 421 GENEPSPDVLSASDRGTEPVEAMSDITYGGSGGAGSSEPMETIASVRGSNG*SMQIHEDE 242
           G++ PS    +A   G E  +       GGSGG G   P +  A+   ++G +    E+E
Sbjct: 155 GKSYPSGIEQTARHGGEEREKNDGSSGEGGSGGGGKGAPSKKNANYSDTSGGTRNEIEEE 214

Query: 241 TDTMLHEGESD 209
             +M+ +GE D
Sbjct: 215 ARSMIRKGEMD 225


>tr|B4P6F8|B4P6F8_DROYA GE12928 OS=Drosophila yakuba GN=GE12928 PE=4
           SV=1
          Length = 954

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -1

Query: 403 PDVLSASDRGTEPVEAMSDITYGGSGGAGSSEPM 302
           PD  S +D   +P+E MSDI  GG+ G G+ E M
Sbjct: 256 PDWNSKNDLVMDPLEKMSDIVKGGASGMGTKEKM 289


>tr|A9VZA5|A9VZA5_METEP Osmosensitive K channel His kinase sensor
           OS=Methylobacterium extorquens (strain PA1) GN=Mext_0236
           PE=4 SV=1
          Length = 905

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
 Frame = -1

Query: 430 TSRGENEPSPDVLSASDRGTEPVEAMSDITYGGSGGAGSSEPMETIASVRGSNG*SMQI- 254
           T R  N PSPD L  + R  E       +  G + G G +  M TI   R + G  + + 
Sbjct: 4   TGRDPNRPSPDALLEAARREERTRGRLKVFLGAAPGVGKTYEMLTIGRARLTAGADVVVG 63

Query: 253 -----HEDETDTMLHEGES 212
                   ET+T+L   ES
Sbjct: 64  VVETHGRAETETLLDGFES 82


>tr|A8JBY4|A8JBY4_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_178101 PE=4 SV=1
          Length = 1916

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -1

Query: 400 DVLSASDRGTEPVEAMSDITYGGSGGAGSSEPMETIASVRGS 275
           DVL  SD   E +E M+ +   GS  +G+  P +  AS RGS
Sbjct: 620 DVLLLSDLDWEELEGMAGLRPSGSATSGAGTPQQAPASARGS 661