BP918747
Clone id YMU001_000117_A08
Library
Length 576
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCCACCAGTGAAAGGATAACATGATACCTTTCTATGGAAGAGGGCTGCTCTATTTCAAGA
ATTACTTCCGCAACTCAAGTTGCTTTCAACAATAAAGATGGCCGGAAAATCTATCTGCCT
TGTAAGCCAATTGCAATATCCCATGTATGGAAAGGAAACTCACATGCCAGGGTGGTTCAA
AGCTGTTCCACTAAATTTGGGTGAGATATGTAGGGCATTAACTATGTCAATAAATGACAC
TATACAGACCTTATTCCATTAAGGCACCAACTTCCGTAACCACCCCGACTCCCCTCACGT
TTTGACTAGTATGGTCAGTGCAGCAGGACCGTTATTTCAGGAGCTGTGCTCAGTATCACT
TGTAAGGTCGCCTCTAAATAAACGCTGTCCATTGACAAGGTCTAATAAGAATTGCAAGCT
TTCTTCCACACAAGACAACATCACAACCAAGACATTCCAAAAGCAGCTATTGCGCCGCTT
TCAATGACCTCTTATAGTCACTGAAAGTTCCATGGAAAGCCGTCGCTTTGCCTTCTGACA
TTACCCATAGCTCATCAACGCTCCCAATTCGCGGCC
■■Homology search results ■■ -
sp_hit_id Q8H0V6
Definition sp|Q8H0V6|GCN3_ARATH GCN20-type ATP-binding cassette protein GCN3 OS=Arabidopsis thaliana
Align length 31
Score (bit) 47.8
E-value 4.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918747|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_A08.
(576 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8H0V6|GCN3_ARATH GCN20-type ATP-binding cassette protein GCN... 48 4e-05
sp|O74797|YGN3_SCHPO UPF0587 protein C2D10.03c OS=Schizosaccharo... 30 8.6

>sp|Q8H0V6|GCN3_ARATH GCN20-type ATP-binding cassette protein GCN3
OS=Arabidopsis thaliana GN=GCN3 PE=2 SV=1
Length = 715

Score = 47.8 bits (112), Expect = 4e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLKAA 473
GSVDELWV+S+G+ FHGTF DYK+ L+++
Sbjct: 684 GSVDELWVVSDGRIAPFHGTFHDYKKLLQSS 714


>sp|O74797|YGN3_SCHPO UPF0587 protein C2D10.03c
OS=Schizosaccharomyces pombe GN=SPBC2D10.03c PE=2 SV=1
Length = 157

Score = 30.0 bits (66), Expect = 8.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3

Query: 565 GSVDELWVMSEGKATA---FHGTFSDYKRSLKAAQ*LLLECLGCDVV 434
G + +W + T G FS Y S + + L+LEC GC++V
Sbjct: 60 GEANLIWTCKNCRKTCSFVIEGPFSPYNDSQETKKVLVLECRGCELV 106


tr_hit_id A9S4D8
Definition tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1 OS=Physcomitrella patens subsp. patens
Align length 29
Score (bit) 52.0
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918747|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_A08.
(576 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfami... 52 2e-05
tr|B4FC32|B4FC32_MAIZE Putative uncharacterized protein OS=Zea m... 49 2e-04
tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genom... 49 2e-04
tr|Q6K7R5|Q6K7R5_ORYSJ Putative non-transporter ABC protein AbcF... 48 4e-04
tr|B8AF60|B8AF60_ORYSI Putative uncharacterized protein OS=Oryza... 48 4e-04
tr|A3ACW9|A3ACW9_ORYSJ Putative uncharacterized protein OS=Oryza... 48 4e-04
tr|Q4P7Y9|Q4P7Y9_USTMA Putative uncharacterized protein OS=Ustil... 36 1.7
tr|Q65Q93|Q65Q93_MANSM RfaF protein OS=Mannheimia succiniciprodu... 35 2.3
tr|B8CB70|B8CB70_THAPS Putative uncharacterized protein OS=Thala... 35 2.9
tr|Q0UKW3|Q0UKW3_PHANO Putative uncharacterized protein OS=Phaeo... 34 5.0
tr|Q0AR90|Q0AR90_MARMM ABC transporter related OS=Maricaulis mar... 34 6.5
tr|A4NUS4|A4NUS4_HAEIN ADP-heptose-LPS heptosyltransferase II OS... 33 8.6
tr|A3UHJ4|A3UHJ4_9RHOB ABC transporter, ATP-binding protein OS=O... 33 8.6

>tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfamily
F, member 1 protein PpABCF1 OS=Physcomitrella patens
subsp. patens GN=ppabcf1 PE=3 SV=1
Length = 726

Score = 52.0 bits (123), Expect = 2e-05
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLK 479
GSVDELW +S+GKAT FHGTF++YK++LK
Sbjct: 697 GSVDELWCVSDGKATPFHGTFAEYKKTLK 725


>tr|B4FC32|B4FC32_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 264

Score = 49.3 bits (116), Expect = 2e-04
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLK 479
GSVDELWV+SEG+ T F GTF DYK+ LK
Sbjct: 236 GSVDELWVVSEGRVTPFSGTFKDYKKMLK 264


>tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00006684001
PE=3 SV=1
Length = 716

Score = 49.3 bits (116), Expect = 2e-04
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLKAA 473
GSV+ELWV+SEGK + FHGTF DYK+ L+++
Sbjct: 686 GSVEELWVVSEGKVSPFHGTFHDYKKILQSS 716


>tr|Q6K7R5|Q6K7R5_ORYSJ Putative non-transporter ABC protein AbcF1
OS=Oryza sativa subsp. japonica GN=P0452F04.18-2 PE=3
SV=1
Length = 382

Score = 47.8 bits (112), Expect = 4e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLKA 476
GSVDELWV+SEG+ + F GTF DYK+ LK+
Sbjct: 353 GSVDELWVVSEGRVSPFAGTFKDYKKMLKS 382


>tr|B8AF60|B8AF60_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_09528 PE=4 SV=1
Length = 708

Score = 47.8 bits (112), Expect = 4e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLKA 476
GSVDELWV+SEG+ + F GTF DYK+ LK+
Sbjct: 679 GSVDELWVVSEGRVSPFAGTFKDYKKMLKS 708


>tr|A3ACW9|A3ACW9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_008641 PE=3 SV=1
Length = 691

Score = 47.8 bits (112), Expect = 4e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3

Query: 565 GSVDELWVMSEGKATAFHGTFSDYKRSLKA 476
GSVDELWV+SEG+ + F GTF DYK+ LK+
Sbjct: 662 GSVDELWVVSEGRVSPFAGTFKDYKKMLKS 691


>tr|Q4P7Y9|Q4P7Y9_USTMA Putative uncharacterized protein OS=Ustilago
maydis GN=UM03774.1 PE=3 SV=1
Length = 769

Score = 35.8 bits (81), Expect = 1.7
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3

Query: 559 VDELWVMSEGKATAFHGTFSDYKR 488
+DELWV+ +GK FHG ++YKR
Sbjct: 733 LDELWVVDDGKVEKFHGDVAEYKR 756


>tr|Q65Q93|Q65Q93_MANSM RfaF protein OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=rfaF PE=4 SV=1
Length = 346

Score = 35.4 bits (80), Expect = 2.3
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +2

Query: 98 MAGKSICLVSQLQYPMYGKETHMPGWFKAVPLNLGEICRALTMSIND---TIQTLFH*GT 268
M S+ + QYP + P W K + + E+ RALTM I + F G
Sbjct: 15 MMSHSLYQTLKKQYPDCAIDVLAPNWCKPLLARMPEVRRALTMPIGHGAFNLTERFRIGK 74

Query: 269 NFRNHPDSPHVL-TSMVSAAGPLFQEL 346
+ RN D VL S+ SA PLF ++
Sbjct: 75 SLRNQYDMAIVLPNSLKSAFIPLFAKI 101


>tr|B8CB70|B8CB70_THAPS Putative uncharacterized protein
OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_29818
PE=4 SV=1
Length = 614

Score = 35.0 bits (79), Expect = 2.9
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3

Query: 553 ELWVMSEGKATAFHGTFSDYKR 488
ELWV+ EGK T F G F++YK+
Sbjct: 571 ELWVVGEGKTTRFRGDFNEYKK 592


>tr|Q0UKW3|Q0UKW3_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_07601 PE=4 SV=2
Length = 1940

Score = 34.3 bits (77), Expect = 5.0
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2

Query: 269 NFRNHPDSPHVLTSMVSAAGPLFQELCSVSLVRSPLNKRCPLTRSNKNCKLSSTQDNI 442
+F NH +P +S A P FQ + SL R+P + P T +K+ K S+ N+
Sbjct: 1850 SFLNHATTPVTPSSPAPEALPAFQNMSQTSLGRTPSTTKRPETGGSKSLKSESSGGNM 1907