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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918752
Clone id YMU001_000117_B01
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACTGGAAGAATTCGCGGCCGGGATCCGTAGGTTGGCTCCGTTCTTCAATGGCTTGACAC
ATAAACAATTTGTGACATCCCCCCTTCTTGAAAGAAAGTAATCGTACGCGATTAAAGCAT
ATCTGCAAAACAACTCAAGTTAGCTCAAAATTTTCCGAGGGATGTTCCAAGGGACAATCT
GTATACTCAATCCAAATTGGAGCTCTTGATTTCCTGGGTCGTTGGCTTCCCAAAAGAATC
TCATCCAATAAGGAGTCATTCCAGATTGGAACTCTTGATATCATGGGTCGTAGGTTTCCC
AAAAGTATCTCATCCAATAAGGAGCCTCATTCTAGATCGGAACTTGATTCCAAACAGGAT
CACCAAGTAAGTTCTCAAACAAAACTCAAACTTAAAAGCAATCTCGACATCAATCGAGCT
TGAAAAGACGATTGGTTTTCCATTCTGAAACCTGCACCAAGATTAGGGTTAGATTTCTTC
TATAAGATTGTAGCCGTCTGCAACATGGTTCATAAGCTCTTGAACATTTGAAACAAGCCT
CGATAGACAG
■■Homology search results ■■ -
sp_hit_id Q7TSC3
Definition sp|Q7TSC3|NEK5_MOUSE Serine/threonine-protein kinase Nek5 OS=Mus musculus
Align length 47
Score (bit) 30.8
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918752|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_B01.
         (529 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7TSC3|NEK5_MOUSE Serine/threonine-protein kinase Nek5 OS=Mus...    31   4.1  
sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein...    30   7.1  
sp|Q1G939|MUTL_LACDA DNA mismatch repair protein mutL OS=Lactoba...    30   9.4  
sp|P53195|COG7_YEAST Conserved oligomeric Golgi complex subunit ...    30   9.4  

>sp|Q7TSC3|NEK5_MOUSE Serine/threonine-protein kinase Nek5 OS=Mus
           musculus GN=Nek5 PE=2 SV=1
          Length = 627

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -3

Query: 200 RPRKSRAPIW----IEYTDCPLEHPSENFELT*VVLQICFNRVRLLS 72
           RP  ++  IW    + Y  C L+HP E+     +VL+IC  RV  +S
Sbjct: 175 RPYNNKTDIWSLGCVLYELCTLKHPFESNNFHHLVLKICQGRVAPIS 221


>sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein 35
           OS=Oryza sativa subsp. japonica GN=Os05g0195200 PE=2
           SV=1
          Length = 402

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 167 EYTDCPLEHPSENFELT*VVLQICFNRVRLLSFKKGGCHKLFMCQ 33
           ++T+CP  HP E         + C++      F+KGGC +   C+
Sbjct: 95  DWTECPFAHPGEKARRR-DPRRYCYSGTACPDFRKGGCKRGDACE 138


>sp|Q1G939|MUTL_LACDA DNA mismatch repair protein mutL
           OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
           ATCC 11842 / DSM 20081) GN=mutL PE=3 SV=1
          Length = 653

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 13/66 (19%), Positives = 31/66 (46%)
 Frame = +1

Query: 232 ESFQIGTLDIMGRRFPKSISSNKEPHSRSELDSKQDHQVSSQTKLKLKSNLDINRA*KDD 411
           + FQ+    +        I++ KE  ++ + + K++ Q   + K      +D+N+  +DD
Sbjct: 363 DDFQLEVSQVAEPEGKTDITNKKETETKEKAEKKENKQEEKEEKTSAPEYVDLNQVREDD 422

Query: 412 WFSILK 429
            + + K
Sbjct: 423 QYVLTK 428


>sp|P53195|COG7_YEAST Conserved oligomeric Golgi complex subunit 7
           OS=Saccharomyces cerevisiae GN=COG7 PE=1 SV=1
          Length = 279

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 24/90 (26%), Positives = 43/90 (47%)
 Frame = +1

Query: 118 VSSKFSEGCSKGQSVYSIQIGALDFLGRWLPKRISSNKESFQIGTLDIMGRRFPKSISSN 297
           +S+  +E   + QSV S+ +  LDF  + L K + S      I  LD + +  P++ +S+
Sbjct: 32  LSNALNEDQIQTQSVSSLLLTRLDFYTKNLTKELEST-----IWNLDKLSQTLPRTWASS 86

Query: 298 KEPHSRSELDSKQDHQVSSQTKLKLKSNLD 387
           +  H  +E +    +   S    KL+  LD
Sbjct: 87  RY-HKEAEQNDSSLYSTESLKSSKLEYYLD 115
tr_hit_id Q8SCS7
Definition tr|Q8SCS7|Q8SCS7_9CAUD PHIKZ235 OS=Pseudomonas phage phiKZ
Align length 37
Score (bit) 37.7
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918752|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_B01.
         (529 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8SCS7|Q8SCS7_9CAUD PHIKZ235 OS=Pseudomonas phage phiKZ GN=OR...    38   0.37 
tr|Q63IS9|Q63IS9_BURPS Putative phosphesterase OS=Burkholderia p...    35   3.1  
tr|Q3JJK0|Q3JJK0_BURP1 Putative phosphesterase OS=Burkholderia p...    35   3.1  
tr|A3P8S0|A3P8S0_BURP0 Ser/Thr protein phosphatase family protei...    35   3.1  
tr|A3NNC4|A3NNC4_BURP6 Phosphesterase OS=Burkholderia pseudomall...    35   3.1  
tr|B7CQG9|B7CQG9_BURPS Ser/Thr protein phosphatase family protei...    35   3.1  
tr|B2HAY9|B2HAY9_BURPS Ser/Thr protein phosphatase family protei...    35   3.1  
tr|B1H913|B1H913_BURPS Ser/Thr protein phosphatase family protei...    35   3.1  
tr|A8KE90|A8KE90_BURPS Ser/Thr protein phosphatase family protei...    35   3.1  
tr|A8EN25|A8EN25_BURPS Ser/Thr protein phosphatase family protei...    35   3.1  
tr|A4LG04|A4LG04_BURPS Ser/Thr protein phosphatase family protei...    35   3.1  
tr|A8GZA5|A8GZA5_SHEPA Na+/H+ antiporter NhaC OS=Shewanella peal...    34   4.0  
tr|A1IGA7|A1IGA7_PHOPO Cobalamin biosynthesis protein CbiB (Frag...    34   5.3  
tr|A6WS91|A6WS91_SHEB8 Peptidase S45 penicillin amidase OS=Shewa...    33   6.9  
tr|A3D0M7|A3D0M7_SHEB5 Peptidase S45, penicillin amidase OS=Shew...    33   6.9  
tr|Q9V9N7|Q9V9N7_DROME CG6448, isoform A OS=Drosophila melanogas...    33   6.9  
tr|A8DZ24|A8DZ24_DROME CG6448, isoform C OS=Drosophila melanogas...    33   6.9  
tr|Q12T42|Q12T42_SHEDO Glyoxalase/bleomycin resistance protein/d...    33   8.8  
tr|B4CZ48|B4CZ48_9BACT Acriflavin resistance protein OS=Chthonio...    33   9.0  
tr|Q9GZ34|Q9GZ34_TRYCR Putative uncharacterized protein OS=Trypa...    33   9.0  

>tr|Q8SCS7|Q8SCS7_9CAUD PHIKZ235 OS=Pseudomonas phage phiKZ
           GN=ORF235 PE=4 SV=1
          Length = 488

 Score = 37.7 bits (86), Expect = 0.37
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -1

Query: 253 EFQSGMTPYWMRFFWEANDPGNQELQFGLSIQIVPWN 143
           EF+SGMTP  ++ FW+      +E+Q+ + + +  WN
Sbjct: 132 EFESGMTPETIQAFWDEYPVNREEIQYIIGVSVTSWN 168


>tr|Q63IS9|Q63IS9_BURPS Putative phosphesterase OS=Burkholderia
           pseudomallei GN=BPSS1987 PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|Q3JJK0|Q3JJK0_BURP1 Putative phosphesterase OS=Burkholderia
           pseudomallei (strain 1710b) GN=BURPS1710b_A1095 PE=4
           SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|A3P8S0|A3P8S0_BURP0 Ser/Thr protein phosphatase family protein
           OS=Burkholderia pseudomallei (strain 1106a)
           GN=BURPS1106A_A2700 PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|A3NNC4|A3NNC4_BURP6 Phosphesterase OS=Burkholderia pseudomallei
           (strain 668) GN=BURPS668_A2853 PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|B7CQG9|B7CQG9_BURPS Ser/Thr protein phosphatase family protein
           OS=Burkholderia pseudomallei 576 GN=BUC_6989 PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|B2HAY9|B2HAY9_BURPS Ser/Thr protein phosphatase family protein
           OS=Burkholderia pseudomallei 1655 GN=BURPS1655_D1093
           PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|B1H913|B1H913_BURPS Ser/Thr protein phosphatase family protein
           OS=Burkholderia pseudomallei S13 GN=BURPSS13_X0841 PE=4
           SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|A8KE90|A8KE90_BURPS Ser/Thr protein phosphatase family protein
           OS=Burkholderia pseudomallei Pasteur 52237
           GN=BURPSPAST_AC0219 PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162


>tr|A8EN25|A8EN25_BURPS Ser/Thr protein phosphatase family protein
           OS=Burkholderia pseudomallei 406e GN=BURPS406E_D0296
           PE=4 SV=1
          Length = 540

 Score = 34.7 bits (78), Expect = 3.1
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -1

Query: 343 GDPVWNQVPI*NEAPYWMRYFWETYDP*YQEFQSGMTPYWMRFFWEANDPGNQELQFGLS 164
           G+P+W Q+ I      + +Y+W+     Y   + G   Y     W+A D GN +L++G  
Sbjct: 109 GNPLWQQMYI-----QYFKYYWQ-----YPYHKGGEPRYRS---WQAADAGNGDLRYG-- 153

Query: 163 IQIVPWNIPRK 131
             ++ W +P +
Sbjct: 154 --VIEWKLPAR 162