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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918767
Clone id YMU001_000117_C05
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GACGACCCTCAAACCAAACATGCTGAGCCATGTGTTGAGAACTTGAACTTGGTCTGATGA
AGGCATGGTTTGTGAGCGAAAGCAAGTGTGCAGACGAAGACGTGACTTCTGAGAGAATTG
CTGGTGTCTTGAATGTGTGTACGTATGTATATATGGCCTGCTCTAGCCGACTCCTTCTGC
GCAGAGGAGCTTCTGGAAGCTGTCACGAGAGCTGAATTTTCATAAGTATCGCATGCTTGG
AGACCAGGAAACCCCCGCCGTACAGTTCGAAAAAATATCCATTTGGGTGATGACTTCTAG
GATTAACATCATGCCTTGCATCATCGTATATGTTAGGTTGAGCTCTTGCTTTCCTTGTGT
GTGG
■■Homology search results ■■ -
sp_hit_id Q032L5
Definition sp|Q032L5|UNG_LACLS Uracil-DNA glycosylase OS=Lactococcus lactis subsp. cremoris (strain SK11)
Align length 60
Score (bit) 32.7
E-value 0.58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918767|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_C05.
         (364 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q032L5|UNG_LACLS Uracil-DNA glycosylase OS=Lactococcus lactis...    33   0.58 
sp|A2RHW2|UNG_LACLM Uracil-DNA glycosylase OS=Lactococcus lactis...    33   0.58 
sp|Q9CIX2|UNG_LACLA Uracil-DNA glycosylase OS=Lactococcus lactis...    32   0.99 
sp|Q4I2M7|ERFB_GIBZE Palmitoyltransferase ERF2 OS=Gibberella zea...    30   3.8  
sp|Q7SFL7|ERFB_NEUCR Palmitoyltransferase ERF2 OS=Neurospora cra...    30   4.9  
sp|P42023|ACTZ_PNECA Actin-2 OS=Pneumocystis carinii PE=2 SV=1         29   6.4  
sp|Q40301|FCPE_MACPY Fucoxanthin-chlorophyll a-c binding protein...    29   8.4  

>sp|Q032L5|UNG_LACLS Uracil-DNA glycosylase OS=Lactococcus lactis
           subsp. cremoris (strain SK11) GN=ung PE=3 SV=1
          Length = 219

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -2

Query: 351 KQELNLTYTMMQGMMLILEVITQMDIFSNCTAGVSWSPSMRYL*KFSSRDSFQKLLCAEG 172
           K++ +LT    QG++L+  V+T  +  SN  AG  W P    + K +S D   K+    G
Sbjct: 103 KEDSDLTAWAEQGVLLLNAVLTVPEFASNAHAGKIWEPLTDEIIKIASDDERPKVFILWG 162


>sp|A2RHW2|UNG_LACLM Uracil-DNA glycosylase OS=Lactococcus lactis
           subsp. cremoris (strain MG1363) GN=ung PE=3 SV=1
          Length = 219

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -2

Query: 351 KQELNLTYTMMQGMMLILEVITQMDIFSNCTAGVSWSPSMRYL*KFSSRDSFQKLLCAEG 172
           K++ +LT    QG++L+  V+T  +  SN  AG  W P    + K +S D   K+    G
Sbjct: 103 KEDSDLTAWAEQGVLLLNAVLTVPEFASNAHAGKIWEPLTDEIIKIASDDERPKVFILWG 162


>sp|Q9CIX2|UNG_LACLA Uracil-DNA glycosylase OS=Lactococcus lactis
           subsp. lactis GN=ung PE=3 SV=1
          Length = 219

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -2

Query: 351 KQELNLTYTMMQGMMLILEVITQMDIFSNCTAGVSWSPSMRYL*KFSSRDSFQKLLCAEG 172
           K + +LT    QG++L+  V+T  +  SN  AG  W P    + K +S D   K+    G
Sbjct: 103 KDDSDLTAWAEQGVLLLNAVLTVPEFASNAHAGKIWEPLTDEIIKIASDDERPKVFILWG 162


>sp|Q4I2M7|ERFB_GIBZE Palmitoyltransferase ERF2 OS=Gibberella zeae
           GN=ERF2 PE=3 SV=1
          Length = 679

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -1

Query: 100 SSSAHLLSLTNHAFIRPSSSSQHMAQ 23
           SS +H+ SL +HAF RP SS +  AQ
Sbjct: 111 SSRSHVPSLQSHAFFRPMSSQKLQAQ 136


>sp|Q7SFL7|ERFB_NEUCR Palmitoyltransferase ERF2 OS=Neurospora crassa
           GN=erf-2 PE=3 SV=1
          Length = 680

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 100 SSSAHLLSLTNHAFIRPSSSSQHMAQ 23
           +S +H+ SLT+H F RP SS +  AQ
Sbjct: 126 ASRSHVPSLTSHGFFRPMSSQKLQAQ 151


>sp|P42023|ACTZ_PNECA Actin-2 OS=Pneumocystis carinii PE=2 SV=1
          Length = 385

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 199 LPEAPLRRRSRLEQAIYTYVHTFKTPAILSEV 104
           L EAPL  R+  +QA   +  TF  PA+ + +
Sbjct: 109 LTEAPLNPRTNRDQAAQVFFETFNVPALFTSI 140


>sp|Q40301|FCPE_MACPY Fucoxanthin-chlorophyll a-c binding protein E,
           chloroplastic OS=Macrocystis pyrifera GN=FCPE PE=2 SV=1
          Length = 212

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 248 PGLQACDTYENSALVTASRSSSAQKES 168
           PGL+  + +  +AL T+++SSSA K S
Sbjct: 9   PGLRGAEPFNGAALATSAKSSSAMKMS 35
tr_hit_id Q5WBN2
Definition tr|Q5WBN2|Q5WBN2_BACSK Putative uncharacterized protein OS=Bacillus clausii (strain KSM-K16)
Align length 60
Score (bit) 33.9
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918767|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_C05.
         (364 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5WBN2|Q5WBN2_BACSK Putative uncharacterized protein OS=Bacil...    34   4.2  
tr|Q4WBN5|Q4WBN5_ASPFU C6 transcription factor, putative OS=Aspe...    34   4.2  
tr|B0Y9B0|B0Y9B0_ASPFC C6 transcription factor, putative OS=Aspe...    34   4.2  
tr|B8QSI4|B8QSI4_DANRE Alpha-2 macroglobulin-like protein OS=Dan...    33   5.5  
tr|A4QNS8|A4QNS8_DANRE Sb:cb37 protein (Fragment) OS=Danio rerio...    33   5.5  
tr|A0JMP8|A0JMP8_DANRE LOC567732 protein (Fragment) OS=Danio rer...    33   5.5  
tr|B2W6W6|B2W6W6_PYRTR Putative uncharacterized protein OS=Pyren...    33   5.5  
tr|Q7QH67|Q7QH67_ANOGA AGAP004052-PA (Fragment) OS=Anopheles gam...    33   5.5  

>tr|Q5WBN2|Q5WBN2_BACSK Putative uncharacterized protein OS=Bacillus
           clausii (strain KSM-K16) GN=ABC3695 PE=4 SV=1
          Length = 431

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/60 (28%), Positives = 33/60 (55%)
 Frame = +2

Query: 185 RSFWKLSRELNFHKYRMLGDQETPAVQFEKISIWVMTSRINIMPCIIVYVRLSSCFPCVW 364
           +S++K S+++N+ KY  L   +      +K+  + + S I IM C+++ V  S   P +W
Sbjct: 89  KSYYKKSKDINYQKYLQLFFNQ------KKVENFFLLSFIVIMVCMLLQVIYSGGLPAIW 142


>tr|Q4WBN5|Q4WBN5_ASPFU C6 transcription factor, putative
           OS=Aspergillus fumigatus GN=AFUA_8G07360 PE=4 SV=2
          Length = 724

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/95 (24%), Positives = 39/95 (41%)
 Frame = -1

Query: 343 AQPNIYDDARHDVNPRSHHPNXXXXXXXXXXXLVSKHAILMKIQLS*QLPEAPLRRRSRL 164
           AQ   YD   H+++  +HH N             S  A++  +Q + +   A  R  SR 
Sbjct: 174 AQEEAYDTVEHEISELNHHTNGIEFHGSS-----SSAALIGHLQTTREKDRAGERLDSRA 228

Query: 163 EQAIYTYVHTFKTPAILSEVTSSSAHLLSLTNHAF 59
            +A ++ + T    +     T  SA L  L +H +
Sbjct: 229 PEAGFSLISTLHNSSFSPSCTVGSAQLAPLQDHNY 263


>tr|B0Y9B0|B0Y9B0_ASPFC C6 transcription factor, putative
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_080380 PE=4 SV=1
          Length = 724

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/95 (24%), Positives = 39/95 (41%)
 Frame = -1

Query: 343 AQPNIYDDARHDVNPRSHHPNXXXXXXXXXXXLVSKHAILMKIQLS*QLPEAPLRRRSRL 164
           AQ   YD   H+++  +HH N             S  A++  +Q + +   A  R  SR 
Sbjct: 174 AQEEAYDTVEHEISELNHHTNGIEFHGSS-----SSAALIGHLQTTREKDRAGERLDSRA 228

Query: 163 EQAIYTYVHTFKTPAILSEVTSSSAHLLSLTNHAF 59
            +A ++ + T    +     T  SA L  L +H +
Sbjct: 229 PEAGFSLISTLHNSSFSPSCTVGSAQLAPLQDHNY 263


>tr|B8QSI4|B8QSI4_DANRE Alpha-2 macroglobulin-like protein OS=Danio
           rerio GN=A2ML PE=2 SV=1
          Length = 1442

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 345 ELNLTYTMMQGMMLILEVITQMDIFSNCT-AGVSWSPSMRYL*KFSSRDSFQKLLCAEG 172
           EL+L Y++++G +  L+  T  +  S C    VS +PS  Y  K SS D +   LCA G
Sbjct: 785 ELSLPYSIIRGEIFELKA-TVFNYLSKCIMVKVSPAPSSDYTLKASSDDQYSSCLCANG 842


>tr|A4QNS8|A4QNS8_DANRE Sb:cb37 protein (Fragment) OS=Danio rerio
           GN=sb:cb37 PE=2 SV=1
          Length = 1445

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 345 ELNLTYTMMQGMMLILEVITQMDIFSNCT-AGVSWSPSMRYL*KFSSRDSFQKLLCAEG 172
           EL+L Y++++G +  L+  T  +  S C    VS +PS  Y  K SS D +   LCA G
Sbjct: 788 ELSLPYSIIRGEIFELKA-TVFNYLSKCIMVKVSPAPSSDYTLKASSDDQYSSCLCANG 845


>tr|A0JMP8|A0JMP8_DANRE LOC567732 protein (Fragment) OS=Danio rerio
           GN=LOC567732 PE=2 SV=1
          Length = 1444

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 345 ELNLTYTMMQGMMLILEVITQMDIFSNCT-AGVSWSPSMRYL*KFSSRDSFQKLLCAEG 172
           EL+L Y++++G +  L+  T  +  S C    VS +PS  Y  K SS D +   LCA G
Sbjct: 787 ELSLPYSIIRGEIFELKA-TVFNYLSKCIMVKVSPAPSSDYTLKASSDDQYSSCLCANG 844


>tr|B2W6W6|B2W6W6_PYRTR Putative uncharacterized protein
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_05554 PE=4 SV=1
          Length = 428

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = -1

Query: 190 APLRRRSRLEQAIYTYVHTFKTPAILSEVTSSSAHLLSLTNHAFIRPSSSSQHMAQHV 17
           APLR    +     T + +F+TPAI++  T SSA   S +N   I   +S QH+ + V
Sbjct: 8   APLRTPKYICGTCRTRLRSFRTPAIVTHQTFSSA---SSSNRQIIHRPTSQQHLRKRV 62


>tr|Q7QH67|Q7QH67_ANOGA AGAP004052-PA (Fragment) OS=Anopheles gambiae
            GN=AGAP004052 PE=4 SV=4
          Length = 1156

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -3

Query: 281  WIFFRTVRRGFPGLQACDTYENSALVTASR 192
            WIFFRT+   F G+   DT+  S+L+T SR
Sbjct: 958  WIFFRTLSNPFFGMGCTDTFIVSSLITLSR 987