BP918773 |
Clone id |
YMU001_000117_C11 |
Library |
YMU01 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000117_C11. |
Accession |
BP918773 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2054Contig1 |
Sequence |
GTCGAATTCTCATACTTTCGTTAATGCCAAACTACGGCATGCTTTGGGAAAGGAATCTGA GGTACTAAGATGCTCAAGTAGAGGACCTGACTTCTGGACACAAGCATATTATCTAACATC TAGATCGTTCAAGCACATGTGCCGGGACTTGACGTACTACTGGTTCAGGCTGTGTGTCTA TGTGATGCTCTCCATTGTTTGAGGGACTATTTATTTCAAGGTCGGCTTAACCTACAATGC AATTCAGGCAAGGACTGCCCTTCTTATGTTTCTCACTGCCTTTTTAAGTCTCATGGGAGT GATGAGCTTTCCTTCCTTCATAGAGGACATGAAGATTTTCACGCGTGAAAGGCTGAACGG TCACTACGGAGTTGCGGCATTTGCTGTTGCAAACACATTGTCATCCTTTCCGTTCATTGT TCTTATCTCTCTTCTCCCAGGCTCATTAGTATACGTGCTTGCGGGATTACATCCGGGGCT GGACCACTTCATTTTCTTTTTTGCCTCATTGCTGGCTTGTCTCGGGGCTACTGAGGGCCT CCTCATGTCGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RXN0 |
Definition |
sp|Q8RXN0|WBC11_ARATH White-brown complex homolog protein 11 OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
171.0 |
E-value |
2.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6K4D1 |
Definition |
tr|Q6K4D1|Q6K4D1_ORYSJ Os09g0472200 protein OS=Oryza sativa subsp. japonica |
Align length |
179 |
Score (bit) |
179.0 |
E-value |
6.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918773|Adiantum capillus-veneris mRNA, clone: YMU001_000117_C11. (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6K4D1|Q6K4D1_ORYSJ Os09g0472200 protein OS=Oryza sativa subs... 179 6e-44 tr|A2Z298|A2Z298_ORYSI Putative uncharacterized protein OS=Oryza... 179 6e-44 tr|A3BZU3|A3BZU3_ORYSJ Putative uncharacterized protein OS=Oryza... 179 8e-44 tr|Q6K4D2|Q6K4D2_ORYSJ Os09g0472100 protein OS=Oryza sativa subs... 176 5e-43 tr|B8BCP6|B8BCP6_ORYSI Putative uncharacterized protein OS=Oryza... 176 5e-43 tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, who... 176 5e-43 tr|A5C3S5|A5C3S5_VITVI Putative uncharacterized protein OS=Vitis... 176 5e-43 tr|A3BZU2|A3BZU2_ORYSJ Putative uncharacterized protein OS=Oryza... 176 5e-43 tr|Q3ZDP9|Q3ZDP9_ARAGE White-brown complex protein 11 (Fragment)... 171 2e-41 tr|A7QT44|A7QT44_VITVI Chromosome undetermined scaffold_165, who... 171 2e-41 tr|Q8LNT5|Q8LNT5_ORYSJ Os10g0494300 protein OS=Oryza sativa subs... 169 7e-41 tr|A3C627|A3C627_ORYSJ Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|A2Z8W6|A2Z8W6_ORYSI Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|Q7EY81|Q7EY81_ORYSJ Os07g0288700 protein OS=Oryza sativa subs... 168 1e-40 tr|Q6X4V5|Q6X4V5_GOSHI ABC transporter OS=Gossypium hirsutum GN=... 168 1e-40 tr|B8B578|B8B578_ORYSI Putative uncharacterized protein OS=Oryza... 168 1e-40 tr|A5B907|A5B907_VITVI Putative uncharacterized protein OS=Vitis... 168 1e-40 tr|A3BIQ9|A3BIQ9_ORYSJ Putative uncharacterized protein OS=Oryza... 168 1e-40 tr|B8BD11|B8BD11_ORYSI Putative uncharacterized protein OS=Oryza... 167 2e-40 tr|A7QT46|A7QT46_VITVI Chromosome undetermined scaffold_165, who... 167 3e-40 tr|Q6K376|Q6K376_ORYSJ Os09g0125900 protein OS=Oryza sativa subs... 166 6e-40 tr|A3BW71|A3BW71_ORYSJ Putative uncharacterized protein OS=Oryza... 166 6e-40 tr|A9TBG0|A9TBG0_PHYPA ATP-binding cassette transporter, subfami... 166 9e-40 tr|Q7XUM2|Q7XUM2_ORYSJ OSJNBa0074L08.3 protein OS=Oryza sativa s... 165 1e-39 tr|Q0JBJ8|Q0JBJ8_ORYSJ Os04g0528300 protein OS=Oryza sativa subs... 165 1e-39 tr|Q01HN4|Q01HN4_ORYSA OSIGBa0115K01-H0319F09.18 protein OS=Oryz... 165 1e-39 tr|B6SL34|B6SL34_MAIZE ATP-binding cassette sub-family G member ... 165 1e-39 tr|A3AVS2|A3AVS2_ORYSJ Putative uncharacterized protein OS=Oryza... 165 1e-39 tr|A2XVR4|A2XVR4_ORYSI Putative uncharacterized protein OS=Oryza... 165 1e-39 tr|A7PAW2|A7PAW2_VITVI Chromosome chr16 scaffold_10, whole genom... 164 2e-39
>tr|Q6K4D1|Q6K4D1_ORYSJ Os09g0472200 protein OS=Oryza sativa subsp. japonica GN=OJ1509_C06.10 PE=3 SV=1 Length = 728
Score = 179 bits (455), Expect = 6e-44 Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 5/179 (2%) Frame = +1
Query: 13 AKLRHAL-----GKESEVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVML 177 AK+ H + E ++++ R P F TQ++ LT RSF +M RDL YYW R +YV L Sbjct: 398 AKVMHQIEEIRANNEGQLVK-KERQPTFLTQSWVLTKRSFVNMYRDLGYYWLRFAIYVAL 456
Query: 178 SIV*GTIYFKVGLTYNAIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYG 357 + GTIY+ VG +Y +IQAR ++LMF+ AFL+ M + FPSF+EDMKIF RERLNGHYG Sbjct: 457 CLCVGTIYYDVGHSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYG 516
Query: 358 VAAFAVANTLSSFPFIVLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 VA+F +ANTLSS P++ LIS++PG++ Y L GL +HF +F A L + EGL+M Sbjct: 517 VASFVIANTLSSTPYLALISVVPGAIAYYLTGLQSSGEHFGYFAAVLFTTMMVVEGLMM 575
>tr|A2Z298|A2Z298_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31729 PE=3 SV=1 Length = 728
Score = 179 bits (455), Expect = 6e-44 Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 5/179 (2%) Frame = +1
Query: 13 AKLRHAL-----GKESEVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVML 177 AK+ H + E ++++ R P F TQ++ LT RSF +M RDL YYW R +YV L Sbjct: 398 AKVMHQIEEIRANNEGQLVK-KERQPTFLTQSWVLTKRSFVNMYRDLGYYWLRFAIYVAL 456
Query: 178 SIV*GTIYFKVGLTYNAIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYG 357 + GTIY+ VG +Y +IQAR ++LMF+ AFL+ M + FPSF+EDMKIF RERLNGHYG Sbjct: 457 CLCVGTIYYDVGHSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYG 516
Query: 358 VAAFAVANTLSSFPFIVLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 VA+F +ANTLSS P++ LIS++PG++ Y L GL +HF +F A L + EGL+M Sbjct: 517 VASFVIANTLSSTPYLALISVVPGAIAYYLTGLQSSGEHFGYFAAVLFTTMMVVEGLMM 575
>tr|A3BZU3|A3BZU3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028565 PE=3 SV=1 Length = 728
Score = 179 bits (454), Expect = 8e-44 Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 5/179 (2%) Frame = +1
Query: 13 AKLRHAL-----GKESEVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVML 177 AK+ H + E ++++ R P F TQ++ LT RSF +M RDL YYW R +YV L Sbjct: 398 AKVMHQIEEIRANNEGQLVK-KERQPTFLTQSWVLTKRSFVNMYRDLGYYWLRFAIYVAL 456
Query: 178 SIV*GTIYFKVGLTYNAIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYG 357 + GTIY+ VG +Y +IQAR ++LMF+ AFL+ M + FPSF+EDMKIF RERLNGHYG Sbjct: 457 CLCVGTIYYDVGHSYGSIQARGSMLMFVAAFLTFMAIGCFPSFVEDMKIFGRERLNGHYG 516
Query: 358 VAAFAVANTLSSFPFIVLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 VA+F +ANTLSS P++ LIS++PG++ Y L GL +HF +F A L + EGL+M Sbjct: 517 VASFVIANTLSSTPYLALISVVPGAIAYYLTGLQSSGEHFGYFAAVLFTTMMVVEGLMM 575
>tr|Q6K4D2|Q6K4D2_ORYSJ Os09g0472100 protein OS=Oryza sativa subsp. japonica GN=OJ1509_C06.9 PE=3 SV=1 Length = 721
Score = 176 bits (447), Expect = 5e-43 Identities = 81/154 (52%), Positives = 108/154 (70%) Frame = +1
Query: 73 PDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV*GTIYFKVGLTYNAIQARTALL 252 P F TQ + LT RSF +M RDL YYW R +Y+ L + GTIY+ +G +Y +IQAR ++L Sbjct: 416 PSFLTQTWVLTKRSFVNMYRDLGYYWLRFAIYIALCLCVGTIYYNIGHSYGSIQARGSML 475
Query: 253 MFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAAFAVANTLSSFPFIVLISLLPGS 432 MF+ AFL+ M + FPSF+EDMKIF RERLNGHYGV +F +ANTLS+ P++ LIS+ PG+ Sbjct: 476 MFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGSFVIANTLSATPYLALISVAPGA 535
Query: 433 LVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 + Y L GL +DHF +F L + EGL+M Sbjct: 536 IGYYLTGLQSSIDHFAYFAVVLFTTMMVVEGLMM 569
>tr|B8BCP6|B8BCP6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31728 PE=4 SV=1 Length = 721
Score = 176 bits (447), Expect = 5e-43 Identities = 81/154 (52%), Positives = 108/154 (70%) Frame = +1
Query: 73 PDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV*GTIYFKVGLTYNAIQARTALL 252 P F TQ + LT RSF +M RDL YYW R +Y+ L + GTIY+ +G +Y +IQAR ++L Sbjct: 416 PSFLTQTWVLTKRSFVNMYRDLGYYWLRFAIYIALCLCVGTIYYNIGHSYGSIQARGSML 475
Query: 253 MFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAAFAVANTLSSFPFIVLISLLPGS 432 MF+ AFL+ M + FPSF+EDMKIF RERLNGHYGV +F +ANTLS+ P++ LIS+ PG+ Sbjct: 476 MFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGSFVIANTLSATPYLALISVAPGA 535
Query: 433 LVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 + Y L GL +DHF +F L + EGL+M Sbjct: 536 IGYYLTGLQSSIDHFAYFAVVLFTTMMVVEGLMM 569
>tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004588001 PE=3 SV=1 Length = 891
Score = 176 bits (447), Expect = 5e-43 Identities = 82/176 (46%), Positives = 115/176 (65%) Frame = +1
Query: 7 VNAKLRHALGKESEVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV 186 V ++ ++ VL F TQ LT RSF +M RDL YYW RL +Y+ L + Sbjct: 563 VQGRVSEICQQKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALCLC 622
Query: 187 *GTIYFKVGLTYNAIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAA 366 GTI++ +G +Y +IQAR ++LMF+ AFL+ M + FPSF+EDMKIF RERLNGHYGV A Sbjct: 623 VGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGA 682
Query: 367 FAVANTLSSFPFIVLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 F + N+LSS P++++ISL+PG++ Y L L G +HF++F L C+ E L+M Sbjct: 683 FVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMM 738
>tr|A5C3S5|A5C3S5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020569 PE=4 SV=1 Length = 857
Score = 176 bits (447), Expect = 5e-43 Identities = 82/176 (46%), Positives = 115/176 (65%) Frame = +1
Query: 7 VNAKLRHALGKESEVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV 186 V ++ ++ VL F TQ LT RSF +M RDL YYW RL +Y+ L + Sbjct: 529 VQGRVSEICQQKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALCLC 588
Query: 187 *GTIYFKVGLTYNAIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAA 366 GTI++ +G +Y +IQAR ++LMF+ AFL+ M + FPSF+EDMKIF RERLNGHYGV A Sbjct: 589 VGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGA 648
Query: 367 FAVANTLSSFPFIVLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 F + N+LSS P++++ISL+PG++ Y L L G +HF++F L C+ E L+M Sbjct: 649 FVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMM 704
>tr|A3BZU2|A3BZU2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028564 PE=3 SV=1 Length = 767
Score = 176 bits (447), Expect = 5e-43 Identities = 81/154 (52%), Positives = 108/154 (70%) Frame = +1
Query: 73 PDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV*GTIYFKVGLTYNAIQARTALL 252 P F TQ + LT RSF +M RDL YYW R +Y+ L + GTIY+ +G +Y +IQAR ++L Sbjct: 462 PSFLTQTWVLTKRSFVNMYRDLGYYWLRFAIYIALCLCVGTIYYNIGHSYGSIQARGSML 521
Query: 253 MFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAAFAVANTLSSFPFIVLISLLPGS 432 MF+ AFL+ M + FPSF+EDMKIF RERLNGHYGV +F +ANTLS+ P++ LIS+ PG+ Sbjct: 522 MFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGSFVIANTLSATPYLALISVAPGA 581
Query: 433 LVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 + Y L GL +DHF +F L + EGL+M Sbjct: 582 IGYYLTGLQSSIDHFAYFAVVLFTTMMVVEGLMM 615
>tr|Q3ZDP9|Q3ZDP9_ARAGE White-brown complex protein 11 (Fragment) OS=Arabis gemmifera GN=WBC11 PE=2 SV=1 Length = 687
Score = 171 bits (433), Expect = 2e-41 Identities = 79/175 (45%), Positives = 113/175 (64%) Frame = +1
Query: 13 AKLRHALGKESEVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV*G 192 AK+ + +L F Q Y LT RSF +M RD YYW RL +Y+++++ G Sbjct: 350 AKVEEISQFKGTILDSGGSQASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILVTVCIG 409
Query: 193 TIYFKVGLTYNAIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAAFA 372 TIY VG +Y+AI AR + F+ F++ M + FPSF+EDMK+F RERLNGHYGVAAF Sbjct: 410 TIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVAAFV 469
Query: 373 VANTLSSFPFIVLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLMS 537 +ANTLS+ PF+++I+ + G++ Y + GLHPG H++FF L A + E L+M+ Sbjct: 470 IANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMA 524
>tr|A7QT44|A7QT44_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006159001 PE=3 SV=1 Length = 687
Score = 171 bits (433), Expect = 2e-41 Identities = 81/163 (49%), Positives = 113/163 (69%) Frame = +1
Query: 46 EVLRCSSRGPDFWTQAYYLTSRSFKHMCRDLTYYWFRLCVYVMLSIV*GTIYFKVGLTYN 225 + L+ S F Q LT RS+ +M RDL YYW RL VY+M+S GTI++ +G + + Sbjct: 360 QALQKSRDHAGFVNQCLILTKRSYVNMSRDLGYYWMRLGVYIMVSFALGTIFYDLGFSNS 419
Query: 226 AIQARTALLMFLTAFLSLMGVMSFPSFIEDMKIFTRERLNGHYGVAAFAVANTLSSFPFI 405 +IQ R ++LMF+ +FL+ M + FPSF+EDMK+F RERLNGHYG AF V NTLSS PF+ Sbjct: 420 SIQDRGSMLMFVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGTGAFVVGNTLSSVPFL 479
Query: 406 VLISLLPGSLVYVLAGLHPGLDHFIFFFASLLACLGATEGLLM 534 +LISL+PG++ Y LAGL G ++FI++ L AC+ E ++M Sbjct: 480 LLISLIPGAIAYYLAGLQKGCEYFIYYALVLFACMMLVESIMM 522
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