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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918775
Clone id YMU001_000117_D01
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACTGGATTAGAGCAAACCACCAGTAGCTCATATAAAACCATTGGATCCCAGAAATCTTTT
ACTTCTTGGAACTTCGTTCCATTCCAGAAATCAATGATCCTTCTTTGAGCATCGTTTACA
CTTTCACGAAGCCATTCTTGCTTATGGCGCCATACATTCAACATCTCATGACAAAATGTA
TTGCATTTAGACAACAACTTTAATTGAGATCAATTGGTATATAGTTGAAAGATAGCATAC
ACTTCCTCGGCTTTTCACAAACGGGGCACTTTTCACAACACTGAAGACAATCTCGCTTTA
GCTTTTTAGAGCGAGGTTCTCTAGAGCATAAAGACTTTGGCATTTCTCCAATAAATTTCT
TCCGAACTTGGTTGAAGGAGTTGTGGCAGATGCCTTGCCCCTTGATGTCTTGTGCATACA
CGATAACGTTGGGCAAAAATCATTCCGAGTCCTTTCAACATTGTCTATAGTTGGTCCCAA
CATGTAGGGACTCGAACACCACCAAGGTCTCCTTCCCATGTAGATTGCAGTTGAATTAAC
AGTCTCGCTAAACTTTGCGA
■■Homology search results ■■ -
sp_hit_id P15270
Definition sp|P15270|SP60_DICDI Spore coat protein SP60 OS=Dictyostelium discoideum
Align length 38
Score (bit) 31.2
E-value 3.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918775|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_D01.
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15270|SP60_DICDI Spore coat protein SP60 OS=Dictyostelium di...    31   3.6  
sp|Q9MUR3|TILS_MESVI tRNA(Ile)-lysidine synthase, chloroplastic ...    30   8.1  
sp|Q9VHN9|HPS5_DROME Hermansky-Pudlak syndrome 5 protein homolog...    30   8.1  
sp|Q8IZF7|GP111_HUMAN Probable G-protein coupled receptor 111 OS...    30   8.1  

>sp|P15270|SP60_DICDI Spore coat protein SP60 OS=Dictyostelium
           discoideum GN=cotC PE=1 SV=2
          Length = 424

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 158 NVWRHKQEWLRESVNDAQRRIIDFWNGTKFQEVKDFWD 45
           N W +  +W  +  ND      D WN   FQ+  D WD
Sbjct: 386 NDWDNDNDWGNDWDNDWDNEDGDNWNDDDFQDANDEWD 423


>sp|Q9MUR3|TILS_MESVI tRNA(Ile)-lysidine synthase, chloroplastic
           OS=Mesostigma viride GN=tilS PE=3 SV=1
          Length = 310

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = -1

Query: 560 SQSLARLLIQLQSTWEGDLGGVRVPTCWDQL*TMLKGLGMI--FAQR-----YRVCTRHQ 402
           S SL ++L++LQ  W  DLG V     W+Q  +  KG   I   AQ      Y++ T HQ
Sbjct: 34  SISLIKILVELQPQWNWDLGIVNCDHSWNQ--SSRKGSSQIAQIAQLLNIDFYQIVTCHQ 91


>sp|Q9VHN9|HPS5_DROME Hermansky-Pudlak syndrome 5 protein homolog
           OS=Drosophila melanogaster GN=p PE=2 SV=1
          Length = 826

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = -3

Query: 444 NDFCPTLSCMHKTSRGKASATTPSTKFGRNLLEKCQSLYALENLALKS*SEIVFSVVKSA 265
           N FC  L    KT   K +  T + KFG+N+++   +++A E   L    E++ +  +S 
Sbjct: 457 NAFCDNLKQPLKTGHFKDALLTVTGKFGKNIIKYKFNIFAEEQQQLV--RELIPASERSL 514

Query: 264 PF--VKSR 247
           PF  +K+R
Sbjct: 515 PFKDIKAR 522


>sp|Q8IZF7|GP111_HUMAN Probable G-protein coupled receptor 111
           OS=Homo sapiens GN=GPR111 PE=2 SV=1
          Length = 708

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = +1

Query: 1   TGLEQTTSSSYKTIGSQ----KSFTSWNFVPFQKSMILL*ASFTLSRSHSCLWRHTFNIS 168
           TG+++    SY TI +     KS ++W F+P + S  +L  S         + +H  +IS
Sbjct: 227 TGVDEAKMQSYSTIANHILNSKSISNWTFIPDRNSSYILLHSVNSFARRLFIDKHPVDIS 286
tr_hit_id A7S850
Definition tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
Align length 54
Score (bit) 41.2
E-value 0.039
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918775|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_D01.
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectens...    41   0.039
tr|A7SNZ4|A7SNZ4_NEMVE Predicted protein OS=Nematostella vectens...    40   0.086
tr|A7SY70|A7SY70_NEMVE Predicted protein OS=Nematostella vectens...    36   1.2  
tr|A7SPB0|A7SPB0_NEMVE Predicted protein OS=Nematostella vectens...    36   1.2  
tr|A3V779|A3V779_9RHOB 3-deoxy-D-manno-octulosonic-acid transfer...    35   3.6  
tr|Q6FUD6|Q6FUD6_CANGA Similar to uniprot|P38198 Saccharomyces c...    34   4.7  
tr|B1DB24|B1DB24_9BACL Extracellular solute-binding protein fami...    34   6.2  
tr|Q4V7V7|Q4V7V7_XENLA MGC115244 protein OS=Xenopus laevis GN=ki...    33   8.1  
tr|B2JXC8|B2JXC8_BURP8 WD-40 repeat protein OS=Burkholderia phym...    33   8.1  
tr|Q29P98|Q29P98_DROPS GA20110 OS=Drosophila pseudoobscura pseud...    33   8.1  
tr|B5DHE8|B5DHE8_DROPS GA25257 OS=Drosophila pseudoobscura pseud...    33   8.1  
tr|B4KIG5|B4KIG5_DROMO GI19846 OS=Drosophila mojavensis GN=GI198...    33   8.1  
tr|B4GKC5|B4GKC5_DROPE GL26055 OS=Drosophila persimilis GN=GL260...    33   8.1  
tr|B3MVA8|B3MVA8_DROAN GF23229 OS=Drosophila ananassae GN=GF2322...    33   8.1  
tr|A8A9F0|A8A9F0_IGNH4 GTPase or GTP-binding protein-like protei...    33   8.1  

>tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g208262 PE=4 SV=1
          Length = 868

 Score = 41.2 bits (95), Expect = 0.039
 Identities = 16/54 (29%), Positives = 33/54 (61%)
 Frame = -1

Query: 173 CHEMLNVWRHKQEWLRESVNDAQRRIIDFWNGTKFQEVKDFWDPMVLYELLVVC 12
           C +ML+ W+ ++ WL+ + +   ++  + W+G ++ EV+ FWDP  L+ +   C
Sbjct: 108 CRKMLSHWQEREHWLKRNTSWPLKK--EVWDGERWLEVQWFWDPDQLWTVPTRC 159


>tr|A7SNZ4|A7SNZ4_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g246481 PE=4 SV=1
          Length = 501

 Score = 40.0 bits (92), Expect = 0.086
 Identities = 15/48 (31%), Positives = 31/48 (64%)
 Frame = -1

Query: 173 CHEMLNVWRHKQEWLRESVNDAQRRIIDFWNGTKFQEVKDFWDPMVLY 30
           C +ML+ W+ ++ WL+ + +   ++  + W+G ++ EV+ FWDP  L+
Sbjct: 256 CRKMLSHWQEREHWLKRNTSWPLKK--EVWDGERWLEVQWFWDPDQLW 301


>tr|A7SY70|A7SY70_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g219377 PE=4 SV=1
          Length = 399

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -1

Query: 173 CHEMLNVWRHKQEWLRESVNDAQRRIIDFWNGTKFQEVKDFWDP 42
           C++ML+ W  ++ WL   V  +     + W+G ++ E++ FWDP
Sbjct: 38  CNKMLSHWNEREHWL--GVEQSWPIKKEMWDGERWNELQWFWDP 79


>tr|A7SPB0|A7SPB0_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g246549 PE=4 SV=1
          Length = 645

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -1

Query: 173 CHEMLNVWRHKQEWLRESVNDAQRRIIDFWNGTKFQEVKDFWDP 42
           C++ML+ W  ++ WL   V  +     + W+G ++ E++ FWDP
Sbjct: 38  CNKMLSHWNEREHWL--GVEQSWPIKKEMWDGERWNELQWFWDP 79


>tr|A3V779|A3V779_9RHOB 3-deoxy-D-manno-octulosonic-acid transferase
           OS=Loktanella vestfoldensis SKA53 GN=SKA53_08316 PE=4
           SV=1
          Length = 444

 Score = 34.7 bits (78), Expect = 3.6
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -1

Query: 494 RVPTCWDQL*TMLKGLGMIFAQRYRVCTRHQGARHLPQ---LLQPSSEEIYW 348
           R P  +D +  ML+G G+ FA+R  V     GAR LPQ   LL  S  E+Y+
Sbjct: 276 RAPERFDAVAAMLEGAGLRFARRSEVLDAALGARDLPQIDVLLGDSMGEMYF 327


>tr|Q6FUD6|Q6FUD6_CANGA Similar to uniprot|P38198 Saccharomyces
           cerevisiae YBL034c STU1 OS=Candida glabrata
           GN=CAGL0F04301g PE=4 SV=1
          Length = 1483

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
 Frame = +1

Query: 13  QTTSSSYKTIGSQKSF----------TSWNFVPFQKSMILL*ASFTLSRSHSCLWRHTFN 162
           +T  SS K I SQ +F          TS+N   FQ S +L+ +    SR  SCL+   F 
Sbjct: 433 KTLLSSTKKISSQIAFHCIVILLSNLTSFNNKQFQNSFVLINSKHIFSRQSSCLFLRVFI 492

Query: 163 IS*QNVLHLDNN 198
           I   N    D+N
Sbjct: 493 IKFANDSKFDSN 504


>tr|B1DB24|B1DB24_9BACL Extracellular solute-binding protein family
           1 OS=Paenibacillus sp. JDR-2 GN=Pjdr2DRAFT_2325 PE=4
           SV=1
          Length = 552

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = -1

Query: 542 LLIQLQSTWEGDL---GGVRVPTCWDQL*TMLKGLGMIFAQRYRVCTRHQGARHLPQLLQ 372
           +LIQ  S++  D+     +++P  WD +    K L  ++  +Y + TR    R L     
Sbjct: 182 MLIQNTSSYRYDIFQQNNIKIPETWDDVYQAAKKLKELYPDKYPIATRWNSLRSL-FAAD 240

Query: 371 PSSEEIYWRNAK 336
              ++IYW  +K
Sbjct: 241 HVKDDIYWNGSK 252


>tr|Q4V7V7|Q4V7V7_XENLA MGC115244 protein OS=Xenopus laevis
           GN=kiaa0194 PE=2 SV=1
          Length = 1247

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 355 FIGEMPKSLCSREPRSKKLKRDCLQCCEKCPVCEKPRKCMLSFNY 221
           F  EM  S  S +P  KK K  C  C E+C   +KPR   L + Y
Sbjct: 13  FSEEMEGSYLSAKPPLKKKK--CKNCAEQCDTAKKPRSAYLLYYY 55


>tr|B2JXC8|B2JXC8_BURP8 WD-40 repeat protein OS=Burkholderia
           phymatum (strain DSM 17167 / STM815) GN=Bphy_7301 PE=4
           SV=1
          Length = 1247

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -3

Query: 510 RPWW--CSSPYMLGPTIDNVERTRNDFCPTLSCMHKTSRGKASATTPSTKFGRNLLEK 343
           +P W    S   LG  ID +   RND  PTLSC+  T           T  G +LLE+
Sbjct: 501 QPMWEVADSTMQLGEVIDRIALRRND--PTLSCISATILASLCGVARQTNRGIDLLER 556


>tr|Q29P98|Q29P98_DROPS GA20110 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA20110 PE=4 SV=2
          Length = 832

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 316 PRSKKLKRDCLQCCEK-CPVCEKPRK 242
           P+  K++R+C   CEK CP+C++P K
Sbjct: 449 PQMAKIERECFHLCEKICPLCDEPLK 474