| BP918780 |
| Clone id |
YMU001_000117_D06 |
| Library |
YMU01 |
| Length |
563 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000117_D06. |
| Accession |
BP918780 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
AACTGGAAGAATTCGCGGCCGCAGGAACTGCGGTGACAAATGTAATAATATACATGGTTC
AAAAAGACGTATAAAATCCGTCTCATGATACATAAGCTATGAGAAACCCTAAACTAATGC
TATCTAGCTACGGCTAAACTGACGTCGTCTAGTCAGACGTCTCATCGCGTCCAAGCGGCG
TATCTGTCGGATTCTGCAAAAAAAGACAATAAGACAGCTTTTAGTAAGTATAAACATATA
ACGACATTTATAAAACAATACAAAAAATAAAAAAGAGTAAACCCTAATACTAACCATGCC
GCCGCGAGAACTGAGAATGTCCATCAGGGCGTTTAAGTCCTTCCTGCCTGCGTACTCGCG
CTCGTACGGTGTGGGATCACGTCCTGTCACGACCACTGTCAAAACATACAAAGATTTCAT
TATGTTAGAACTAAAAAACTCATAAACCCTAAACTATCGAACATGCATAAAGAGCAATGT
GAAAACACTTACAAAATCGGCCTCAAATGATGCCCATTCACCGCTCCCCAAGTGGTGCGA
GCTCCCTGCCTCTACTCGCGCTC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P24349 |
| Definition |
sp|P24349|SDC1_CAEEL Zinc finger protein sdc-1 OS=Caenorhabditis elegans |
| Align length |
44 |
| Score (bit) |
32.3 |
| E-value |
1.5 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7IW48 |
| Definition |
tr|A7IW48|A7IW48_PBCVN Putative uncharacterized protein B173L OS=Paramecium bursaria Chlorella virus NY2A |
| Align length |
58 |
| Score (bit) |
34.3 |
| E-value |
4.2 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918780|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_D06.
(536 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7IW48|A7IW48_PBCVN Putative uncharacterized protein B173L OS... 34 4.2
tr|A0CZ90|A0CZ90_PARTE Chromosome undetermined scaffold_32, whol... 34 5.5
tr|Q24YR9|Q24YR9_DESHY Putative uncharacterized protein OS=Desul... 33 9.3
tr|B1WSW0|B1WSW0_CYAA5 Putative HAD-superfamily hydrolase, subfa... 33 9.3
tr|A0EGN6|A0EGN6_PARTE Chromosome undetermined scaffold_95, whol... 33 9.3
tr|Q2TWN3|Q2TWN3_ASPOR Molybdopterin synthase sulfurylase OS=Asp... 33 9.3
tr|B8NWD7|B8NWD7_ASPFL Molybdenum cofactor biosynthetic protein ... 33 9.3
>tr|A7IW48|A7IW48_PBCVN Putative uncharacterized protein B173L
OS=Paramecium bursaria Chlorella virus NY2A GN=B173L
PE=4 SV=1
Length = 414
Score = 34.3 bits (77), Expect = 4.2
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 139 RVQAAYLSDSAKKDNKTAFSKYKHITTFI----KQYKK*KRVNPNTNHAAARTENVHQ 300
++ YLS+ K+ NKT+FSKY + KQ+ K K ++ N + ++ N+ +
Sbjct: 337 KISVGYLSEMVKQKNKTSFSKYDFLQRIYIFQEKQFSKRKDISTMFNISISKVRNLEK 394
>tr|A0CZ90|A0CZ90_PARTE Chromosome undetermined scaffold_32, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00011680001 PE=4 SV=1
Length = 675
Score = 33.9 bits (76), Expect = 5.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -3
Query: 414 EFFSSNIMKSLYVLTVVVTGRDPTPYEREYAGRKDLNALMDILSSRGGMVSIRVYSFLFF 235
+F +N+ S + + R P Y+ ++D L D+LS GG +I V F FF
Sbjct: 293 DFRVNNVQNSGSSYSAIYMRRSPYTYQV----KRDFQDLADLLSYLGGFANIVVMIFGFF 348
Query: 234 VLFY-KCRYMFIL 199
+ FY K ++M L
Sbjct: 349 ISFYNKSQFMIEL 361
>tr|Q24YR9|Q24YR9_DESHY Putative uncharacterized protein
OS=Desulfitobacterium hafniense (strain Y51) GN=DSY1034
PE=4 SV=1
Length = 209
Score = 33.1 bits (74), Expect = 9.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 263 VLGFTLFYFLYCFINVVICLYLLKAVLLSFFA 168
VLGF LF L F+ C+Y+LK +++ FFA
Sbjct: 178 VLGFGLFTVLQSFLISWYCVYVLKVMMIDFFA 209
>tr|B1WSW0|B1WSW0_CYAA5 Putative HAD-superfamily hydrolase,
subfamily IA, variant 3 OS=Cyanothece (strain ATCC
51142) GN=gph PE=4 SV=1
Length = 237
Score = 33.1 bits (74), Expect = 9.3
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 351 DPTPYEREYAGRKDLNALMDILSSRGGMVS 262
DP+ Y+ GR D L+DILS RG MVS
Sbjct: 42 DPSEYQELCLGRSDRACLLDILSRRGRMVS 71
>tr|A0EGN6|A0EGN6_PARTE Chromosome undetermined scaffold_95, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00026801001 PE=4 SV=1
Length = 677
Score = 33.1 bits (74), Expect = 9.3
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 414 EFFSSNIMKSLYVLTVVVTGRDPTPYEREYAGRKDLNALMDILSSRGGMVSIRVYSFLFF 235
+F SN+ S + + R P Y+ ++D L D+LS GG +I V F F
Sbjct: 293 DFRVSNVQNSGSQYSAIYMRRSPYTYQV----KRDFQDLADLLSYLGGFANIVVMVFGFL 348
Query: 234 VLFY-KCRYMFIL 199
+ FY K ++M L
Sbjct: 349 ITFYNKSQFMIEL 361
>tr|Q2TWN3|Q2TWN3_ASPOR Molybdopterin synthase sulfurylase
OS=Aspergillus oryzae GN=AO090010000489 PE=4 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 9.3
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 281 ELRMSIRAFKSFLPAYSRSYGVGS---RPVTTTVKTYKDFIMLELKNS*TLNYRTCIKSN 451
E R+S R +++ P + S +G+ P V+ F + L+NS + + + S
Sbjct: 320 EERISPREYRTKYPVTASSEAIGTVTKEPTIIDVREKVQFDICSLENSINIPISSILSSA 379
Query: 452 VKTLTKSASNDAHSPLPKWCELPA 523
KT + + +PLP W LPA
Sbjct: 380 TKTAQNNEVANGSNPLPPW--LPA 401
>tr|B8NWD7|B8NWD7_ASPFL Molybdenum cofactor biosynthetic protein
(CnxF), putative OS=Aspergillus flavus NRRL3357
GN=AFLA_119740 PE=4 SV=1
Length = 495
Score = 33.1 bits (74), Expect = 9.3
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 281 ELRMSIRAFKSFLPAYSRSYGVGS---RPVTTTVKTYKDFIMLELKNS*TLNYRTCIKSN 451
E R+S R +++ P + S +G+ P V+ F + L+NS + + + S
Sbjct: 352 EERISPREYRTKYPVTASSEAIGTVTKEPTIIDVREKVQFDICSLENSINIPISSILSSA 411
Query: 452 VKTLTKSASNDAHSPLPKWCELPA 523
KT + + +PLP W LPA
Sbjct: 412 TKTAQNNEVANGSNPLPPW--LPA 433
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