BP918785 |
Clone id |
YMU001_000117_D11 |
Library |
YMU01 |
Length |
535 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000117_D11. |
Accession |
BP918785 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCCGCAATCATGGTATCCAACCGACGACATTTTGGAAAGTAAACTCCTCAAGCACTCCTT GCTTTTTGAAGCGCACCACACTTGGCGTACATATCAAGCGAAGCATTGCTAAGCTCGACA TGTTTCTCCAATAGCTCTGTTTTTCCAATGACTCCTGCAACGATCAATGTTTCCTTGCAA CTCCAAGCGGGTGCTTAGCATTAATTCCTTCATAATCCATCATCCTCGGCCGTGTCTAGC AAATGTAATGGGATGGCAACAAATGCCAACGGAAAAGAACAGACTACACAGACTTTAGAC ACTTCAAGACAACTAAGTTGAAAGAGAGACTTCACACAAGACATGGAGTACGTAGTTCCA CTCCCAAAATGTCAAGCAAATGGTTCTCCTCGTTGTGAAAGAGTGGATCTCCAGCTCCAT GCTTCCAAATGCTTCTAGTATTACTTGTCTGCAAAAAGCACCAATGCTCCAGAAACCCTA ATTTACTGTTACAAACCCTAATTTTTCATAAATTGTCGGGTCAAAATCCGCTCGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0C899 |
Definition |
sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana |
Align length |
35 |
Score (bit) |
34.7 |
E-value |
0.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P0D1 |
Definition |
tr|A7P0D1|A7P0D1_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
24 |
Score (bit) |
34.7 |
E-value |
3.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918785|Adiantum capillus-veneris mRNA, clone: YMU001_000117_D11. (535 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P0D1|A7P0D1_VITVI Chromosome chr6 scaffold_3, whole genome ... 35 3.2 tr|A5BJ29|A5BJ29_VITVI Putative uncharacterized protein OS=Vitis... 35 3.2 tr|Q2QZT2|Q2QZT2_ORYSJ Os11g0673000 protein OS=Oryza sativa subs... 34 4.1 tr|A7QTS4|A7QTS4_VITVI Chromosome undetermined scaffold_171, who... 34 4.1 tr|A7PWD6|A7PWD6_VITVI Chromosome chr8 scaffold_34, whole genome... 34 4.1 tr|A3BAH6|A3BAH6_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.1 tr|A2ZGU1|A2ZGU1_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.1 tr|B4FYX7|B4FYX7_MAIZE Putative uncharacterized protein OS=Zea m... 34 5.4 tr|A7P5R6|A7P5R6_VITVI Chromosome chr4 scaffold_6, whole genome ... 34 5.4 tr|A4QZA7|A4QZA7_MAGGR Predicted protein OS=Magnaporthe grisea G... 34 5.5 tr|Q7FAQ9|Q7FAQ9_ORYSA OSJNBb0004A17.12 protein OS=Oryza sativa ... 33 7.0 tr|Q259A5|Q259A5_ORYSA H0322F07.4 protein OS=Oryza sativa GN=H03... 33 7.0 tr|Q1KUN7|Q1KUN7_9ROSI Putative uncharacterized protein OS=Cleom... 33 7.0 tr|Q0J946|Q0J946_ORYSJ Os04g0672700 protein OS=Oryza sativa subs... 33 7.0 tr|A9T480|A9T480_PHYPA Predicted protein (Fragment) OS=Physcomit... 33 7.0 tr|A2XYU8|A2XYU8_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.0 tr|Q8S7V8|Q8S7V8_ORYSJ cDNA, clone: J090081F08, full insert sequ... 33 9.2 tr|Q6ZH58|Q6ZH58_ORYSJ cDNA clone:J023139G21, full insert sequen... 33 9.2 tr|Q6ZH57|Q6ZH57_ORYSJ Pentatricopeptide (PPR) repeat-containing... 33 9.2 tr|Q6Z996|Q6Z996_ORYSJ Putative pentatricopeptide (PPR) repeat-c... 33 9.2 tr|Q0J729|Q0J729_ORYSJ Os08g0238100 protein OS=Oryza sativa subs... 33 9.2 tr|Q0DX78|Q0DX78_ORYSJ Os02g0769900 protein (Fragment) OS=Oryza ... 33 9.2 tr|B8AG74|B8AG74_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.2 tr|A7QLP0|A7QLP0_VITVI Chromosome chr13 scaffold_120, whole geno... 33 9.2 tr|A7PDX6|A7PDX6_VITVI Chromosome chr11 scaffold_13, whole genom... 33 9.2 tr|A7NY29|A7NY29_VITVI Chromosome chr6 scaffold_3, whole genome ... 33 9.2 tr|A7NXL2|A7NXL2_VITVI Chromosome chr5 scaffold_2, whole genome ... 33 9.2 tr|A5AU23|A5AU23_VITVI Putative uncharacterized protein OS=Vitis... 33 9.2 tr|A3BQZ2|A3BQZ2_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.2 tr|A3ABR7|A3ABR7_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.2
>tr|A7P0D1|A7P0D1_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024861001 PE=4 SV=1 Length = 576
Score = 34.7 bits (78), Expect = 3.2 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = -3
Query: 131 LEKHVELSNASLDMYAKCGALQKA 60 L K V L+NA +DMYAKCG ++KA Sbjct: 302 LSKIVPLNNALIDMYAKCGKIEKA 325
>tr|A5BJ29|A5BJ29_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041201 PE=4 SV=1 Length = 576
Score = 34.7 bits (78), Expect = 3.2 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = -3
Query: 131 LEKHVELSNASLDMYAKCGALQKA 60 L K V L+NA +DMYAKCG ++KA Sbjct: 302 LSKIVPLNNALIDMYAKCGKIEKA 325
>tr|Q2QZT2|Q2QZT2_ORYSJ Os11g0673000 protein OS=Oryza sativa subsp. japonica GN=Os11g0673000 PE=4 SV=1 Length = 515
Score = 34.3 bits (77), Expect = 4.1 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -3
Query: 143 KTELLEKHVELSNASLDMYAKCGALQKAR 57 K+ LL++ V ++NA +DMY KCG + AR Sbjct: 289 KSGLLDRKVHVANAVMDMYCKCGDVHSAR 317
>tr|A7QTS4|A7QTS4_VITVI Chromosome undetermined scaffold_171, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006467001 PE=4 SV=1 Length = 676
Score = 34.3 bits (77), Expect = 4.1 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = -3
Query: 134 LLEKHVELSNASLDMYAKCGALQKAR 57 LL+ ++ L NA +DMYAKCG L+ AR Sbjct: 334 LLQPNLLLENALIDMYAKCGCLEYAR 359
>tr|A7PWD6|A7PWD6_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025570001 PE=4 SV=1 Length = 564
Score = 34.3 bits (77), Expect = 4.1 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = -3
Query: 137 ELLEKHVELSNASLDMYAKCGALQKAR 57 +L+E +ELS A ++MYAKCG +++A+ Sbjct: 222 QLIETDLELSTALVNMYAKCGCIERAK 248
>tr|A3BAH6|A3BAH6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020048 PE=4 SV=1 Length = 334
Score = 34.3 bits (77), Expect = 4.1 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -3
Query: 143 KTELLEKHVELSNASLDMYAKCGALQKAR 57 K+ LL++ V ++NA +DMY KCG + AR Sbjct: 108 KSGLLDRKVHVANAVMDMYCKCGDVHSAR 136
>tr|A2ZGU1|A2ZGU1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36997 PE=4 SV=1 Length = 515
Score = 34.3 bits (77), Expect = 4.1 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -3
Query: 143 KTELLEKHVELSNASLDMYAKCGALQKAR 57 K+ LL++ V ++NA +DMY KCG + AR Sbjct: 289 KSGLLDRKVHVANAVMDMYCKCGDVHSAR 317
>tr|B4FYX7|B4FYX7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 583
Score = 33.9 bits (76), Expect = 5.4 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -3
Query: 131 LEKHVELSNASLDMYAKCGALQKAR 57 L K+V + NA +DMY KCG+L+ AR Sbjct: 170 LGKYVAVKNALIDMYGKCGSLEDAR 194
>tr|A7P5R6|A7P5R6_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032631001 PE=4 SV=1 Length = 484
Score = 33.9 bits (76), Expect = 5.4 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = -3
Query: 137 ELLEKHVELSNASLDMYAKCGALQKA 60 E + K VELSNA +DM+AKCG + KA Sbjct: 141 ERVLKTVELSNALVDMFAKCGDVDKA 166
>tr|A4QZA7|A4QZA7_MAGGR Predicted protein OS=Magnaporthe grisea GN=MGG_07905 PE=4 SV=1 Length = 1973
Score = 33.9 bits (76), Expect = 5.5 Identities = 27/84 (32%), Positives = 40/84 (47%) Frame = +1
Query: 226 SAVSSKCNGMATNANGKEQTTQTLDTSRQLS*KRDFTQDMEYVVPLPKCQANGSPRCERV 405 +A S+K T+ K ++ T+D S Q ++D D+E P K + NG+P E Sbjct: 913 TAGSAKGKDATTSTPEKPKSANTVDDSTQK--RKDVDSDLEKETPARKKRRNGAPETEAS 970
Query: 406 DLQLHASKCF*YYLSAKSTNAPET 477 L A LS+ ST AP+T Sbjct: 971 VLPAKAPNL--AGLSSDSTVAPKT 992
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