BP918789
Clone id YMU001_000117_E03
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTGCACTCGCTGATCATCTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTG
GCAGTTGCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATATAAGAGCTTCTCCGGCCTC
AGGCCCACTACCCTGCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAG
CCGCGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTC
CTACTTGCCGACTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAA
AGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCA
CGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTG
CCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGC
CTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCA
■■Homology search results ■■ -
sp_hit_id Q96542
Definition sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa
Align length 152
Score (bit) 169.0
E-value 7.0e-42
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918789|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E03.
(516 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 169 7e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 167 3e-41
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 166 5e-41
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 165 1e-40
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 165 1e-40
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 165 1e-40
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 165 1e-40
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 165 1e-40
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 165 1e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 165 1e-40
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 164 2e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 164 2e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 164 2e-40
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 164 3e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 164 3e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 163 4e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 163 5e-40
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 162 7e-40
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 162 9e-40
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 162 1e-39
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 162 1e-39
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 162 1e-39
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 161 1e-39
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 161 2e-39
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 160 3e-39
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 160 3e-39
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 160 4e-39
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 159 6e-39

>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 169 bits (428), Expect = 7e-42
Identities = 85/152 (55%), Positives = 101/152 (66%), Gaps = 15/152 (9%)
Frame = +2

Query: 104 RASPASG----PLPCAAPKSANPLS----------ISNGSRVSAMLVWKPYDNKKFETLS 241
RASPA P C SA P++ SNG RV M VW P KKFETLS
Sbjct: 16 RASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLS 75

Query: 242 YLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFG 418
YLP LSSEQ+AK+VD+++RK PC+EF+ + G VYREH GYYDGRYW MWKLPMFG
Sbjct: 76 YLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFG 135

Query: 419 CQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
C D++ VL+E+ EC K YP AFIR++GFD KR
Sbjct: 136 CNDSSQVLKELEECKKAYPSAFIRIIGFDNKR 167


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
Length = 177

Score = 167 bits (422), Expect = 3e-41
Identities = 82/138 (59%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Frame = +2

Query: 107 ASPASGPLPCAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQ 280
A +S P P A K+ N LS SNG RVS M VW P KKFETLSYLP LS E +AK+
Sbjct: 28 ACRSSVPFP-ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE 86

Query: 281 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 460
VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEA 146

Query: 461 AKEYPEAFIRVLGFDAKR 514
K YPE F+R++GFD KR
Sbjct: 147 KKAYPEYFVRIIGFDNKR 164


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 174

Score = 166 bits (421), Expect = 5e-41
Identities = 72/129 (55%), Positives = 92/129 (71%)
Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
LP + +A+ S+SNG R+ M VW KKFETLSYLP LS+E + KQVD+++R W
Sbjct: 25 LPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 84

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
PC+EF K+G ++REH GYYDGRYW MWKLPMFGC DA VL E+ E KEYP+A++
Sbjct: 85 VPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 144

Query: 488 RVLGFDAKR 514
R++GFD R
Sbjct: 145 RIIGFDNMR 153


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171

Score = 165 bits (418), Expect = 1e-40
Identities = 71/115 (61%), Positives = 89/115 (77%)
Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 349
SNG RV M VW P+ N KFETLSYLPTL+ EQ+ K+V++++R W PC+EFD GS+ R
Sbjct: 44 SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 350 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
++ GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD R
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVR 158


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 165 bits (418), Expect = 1e-40
Identities = 71/113 (62%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 346
SNG RV M VW P KK+ETLSYLP LS E ++K++D+++R W PC+EF+ + G VY
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 347 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFD 505
REH H GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFD 162


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
Length = 170

Score = 165 bits (417), Expect = 1e-40
Identities = 73/130 (56%), Positives = 92/130 (70%)
Frame = +2

Query: 116 ASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMV 295
++ LP A S + ++SNG R+ M VW Y NKKFETLSYLP LS++ + KQVD+++
Sbjct: 22 STASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLL 81

Query: 296 RKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYP 475
R GW PC+EF K+G VYRE+ YYDGRYW MWKLPMFGC DA V +E+ E K YP
Sbjct: 82 RNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYP 141

Query: 476 EAFIRVLGFD 505
+AF RV+GFD
Sbjct: 142 DAFHRVIGFD 151


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 165 bits (417), Expect = 1e-40
Identities = 78/128 (60%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
Frame = +2

Query: 137 AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWT 310
A K+ N LS SNG RVS M VW P KKFETLSYLP LS E +AK+VD+++R W
Sbjct: 37 ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWV 96

Query: 311 PCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 490
PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R
Sbjct: 97 PCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVR 156

Query: 491 VLGFDAKR 514
++GFD KR
Sbjct: 157 IIGFDNKR 164


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 165 bits (417), Expect = 1e-40
Identities = 78/128 (60%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
Frame = +2

Query: 137 AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWT 310
A K+ N LS SNG RVS M VW P KKFETLSYLP LS E +AK+VD+++R W
Sbjct: 37 ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWV 96

Query: 311 PCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 490
PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R
Sbjct: 97 PCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVR 156

Query: 491 VLGFDAKR 514
++GFD KR
Sbjct: 157 IIGFDNKR 164


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
Length = 177

Score = 165 bits (417), Expect = 1e-40
Identities = 81/138 (58%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
Frame = +2

Query: 107 ASPASGPLPCAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQ 280
A +S P P A K+ N LS NG RVS M VW P KKFETLSYLP LS E +AK+
Sbjct: 28 ACRSSVPFP-ATRKANNNLSTLPGNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE 86

Query: 281 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 460
VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEA 146

Query: 461 AKEYPEAFIRVLGFDAKR 514
K YPE F+R++GFD KR
Sbjct: 147 KKAYPEYFVRIIGFDNKR 164


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
Length = 175

Score = 165 bits (417), Expect = 1e-40
Identities = 76/135 (56%), Positives = 93/135 (68%)
Frame = +2

Query: 110 SPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDF 289
S A P+ C + S S+SNG R+ M VW KKFETLSYLP LS+E + KQVD+
Sbjct: 21 STAGLPISCRSG-STGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDY 79

Query: 290 MVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKE 469
++R W PC+EF K+G V+REH GYYDGRYW MWKLPMFGC DA VL E+ E KE
Sbjct: 80 LIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 139

Query: 470 YPEAFIRVLGFDAKR 514
YP+A++RV+GFD R
Sbjct: 140 YPDAYVRVIGFDNMR 154


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 125
Score (bit) 241.0
E-value 7.0e-63
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918789|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E03.
(516 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 241 7e-63
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 172 1e-41
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 170 4e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 169 1e-40
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 168 1e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 167 3e-40
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 167 3e-40
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c... 166 5e-40
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c... 166 5e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 166 5e-40
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c... 166 6e-40
tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c... 166 8e-40
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 166 8e-40
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9SAX0|Q9SAX0_AEGSE Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9SAW9|Q9SAW9_AEGTA Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9SAW8|Q9SAW8_TRITI Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9SAW4|Q9SAW4_SECCE Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c... 165 1e-39
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m... 165 1e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 241 bits (616), Expect(2) = 7e-63
Identities = 109/125 (87%), Positives = 119/125 (95%)
Frame = +2

Query: 140 APKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCI 319
APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLP L+++QIAKQV++MVRKGWTPCI
Sbjct: 36 APKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCI 95

Query: 320 EFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 499
EFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLG
Sbjct: 96 EFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLG 155

Query: 500 FDAKR 514
FDAKR
Sbjct: 156 FDAKR 160



Score = 23.1 bits (48), Expect(2) = 7e-63
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1

Query: 97 LYKSFSGLRPTTLRCPQERQP 159
L KSFSGL+ TL P+ P
Sbjct: 22 LSKSFSGLKANTLFAPKCANP 42


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
chain OS=Populus trichocarpa PE=2 SV=1
Length = 170

Score = 172 bits (435), Expect = 1e-41
Identities = 75/137 (54%), Positives = 96/137 (70%)
Frame = +2

Query: 101 IRASPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQ 280
+RA P P + + ++SNGS+ M W P +NKKFE LSYLP LS + IAK+
Sbjct: 19 LRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKE 78

Query: 281 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 460
+D+M++KGW PC+EFD++GSV REH GYYDGRYW +WKLPMFGC D++ VL EI EC
Sbjct: 79 IDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHEC 138

Query: 461 AKEYPEAFIRVLGFDAK 511
K YP+A+IR L FD K
Sbjct: 139 KKAYPDAYIRCLAFDNK 155


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
chain OS=Picea sitchensis PE=2 SV=1
Length = 159

Score = 170 bits (430), Expect = 4e-41
Identities = 77/136 (56%), Positives = 99/136 (72%)
Frame = +2

Query: 107 ASPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVD 286
+S A+ A PK++N SNG RV M VW PY+N KFETLSYLP L+ EQ+ K+V+
Sbjct: 9 SSTAAVAAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVE 68

Query: 287 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 466
+++R W PC+EFD+ G + R++ GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK
Sbjct: 69 YLLRNKWVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAK 128

Query: 467 EYPEAFIRVLGFDAKR 514
YP+AFIRV+GFD R
Sbjct: 129 AYPKAFIRVIGFDNVR 144


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
chain OS=Panax ginseng PE=2 SV=1
Length = 183

Score = 169 bits (427), Expect = 1e-40
Identities = 73/116 (62%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 346
SNG RV M VW P KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VY
Sbjct: 51 SNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVY 110

Query: 347 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
REH H GYYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD R
Sbjct: 111 REHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVR 166


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
chain OS=Ammopiptanthus mongolicus PE=2 SV=1
Length = 174

Score = 168 bits (426), Expect = 1e-40
Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Frame = +2

Query: 110 SPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDF 289
S AS P+P ++ +NG RV MLVW P KKFETLSYLP LS E + K+V++
Sbjct: 23 SMASFPVPRKVNSDITTIA-NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEY 81

Query: 290 MVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 466
++RKGW PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC DA+ V++E+ EC K
Sbjct: 82 LLRKGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKK 141

Query: 467 EYPEAFIRVLGFDAKR 514
EYP AF+R++GFD KR
Sbjct: 142 EYPTAFVRIIGFDNKR 157


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
Length = 165

Score = 167 bits (423), Expect = 3e-40
Identities = 74/129 (57%), Positives = 92/129 (71%)
Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
LP + S + S+SNG R+ M VW KKFETLSYLP LS+E + KQVD+++R W
Sbjct: 21 LPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 80

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
PC+EF K+G V+REH+ GYYDGRYW MWKLPMFGC DA VL E+ E KEYP+A++
Sbjct: 81 VPCLEFSKVGFVFREHYSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 140

Query: 488 RVLGFDAKR 514
RV+GFD R
Sbjct: 141 RVIGFDNLR 149


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 167 bits (423), Expect = 3e-40
Identities = 72/116 (62%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 346
SNG RV M VW P KK+ETLSYLP LS E ++K++D+++R W PC+EF+ + G VY
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 347 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
REH H GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ R
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVR 165


>tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Triticum aestivum GN=rbcS PE=3 SV=1
Length = 165

Score = 166 bits (421), Expect = 5e-40
Identities = 75/129 (58%), Positives = 92/129 (71%)
Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
LP + SA+ S+SNG R+ M VW KKFETLSYLP LS+E + KQVD+++R W
Sbjct: 21 LPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 80

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
PC+EF K+G V+REH GYYDGRYW MWKLPMFGC DA VL E+ E KEYP+A++
Sbjct: 81 VPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 140

Query: 488 RVLGFDAKR 514
RV+GFD R
Sbjct: 141 RVIGFDNLR 149


>tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Aegilops longissima GN=rbcS PE=3
SV=1
Length = 165

Score = 166 bits (421), Expect = 5e-40
Identities = 75/129 (58%), Positives = 92/129 (71%)
Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
LP + SA+ S+SNG R+ M VW KKFETLSYLP LS+E + KQVD+++R W
Sbjct: 21 LPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 80

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
PC+EF K+G V+REH GYYDGRYW MWKLPMFGC DA VL E+ E KEYP+A++
Sbjct: 81 VPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 140

Query: 488 RVLGFDAKR 514
RV+GFD R
Sbjct: 141 RVIGFDNLR 149


>tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small
chain OS=Corchorus olitorius PE=2 SV=1
Length = 183

Score = 166 bits (421), Expect = 5e-40
Identities = 82/152 (53%), Positives = 100/152 (65%), Gaps = 15/152 (9%)
Frame = +2

Query: 104 RASPASGPL--PCAAPKSANPLSI------------SNGSRVSAMLVWKPYDNKKFETLS 241
RASPA L P KSA+ SNG RV M VW P KKFETLS
Sbjct: 14 RASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGKKKFETLS 73

Query: 242 YLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFG 418
YLP L+ Q+AK+VD+++R GW PC+EF+ + G VYREH H GYYDGRYW MWKLPMFG
Sbjct: 74 YLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFG 133

Query: 419 CQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
C D++ VL+E+ E K YP+AFIR++GFD +R
Sbjct: 134 CTDSSQVLKELEEAKKAYPDAFIRIIGFDNRR 165