NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918789
Clone id YMU001_000117_E03
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGCACTCGCTGATCATCTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTG
GCAGTTGCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATATAAGAGCTTCTCCGGCCTC
AGGCCCACTACCCTGCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAG
CCGCGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTC
CTACTTGCCGACTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAA
AGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCA
CGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTG
CCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGC
CTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCA
■■Homology search results ■■ -
sp_hit_id Q96542
Definition sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa
Align length 152
Score (bit) 169.0
E-value 7.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918789|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E03.
         (516 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   169   7e-42
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   167   3e-41
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   166   5e-41
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   164   2e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   164   2e-40
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   164   3e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   163   4e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   163   5e-40
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   162   7e-40
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   162   9e-40
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   162   1e-39
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   161   1e-39
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   160   3e-39
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   160   4e-39
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   160   4e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   160   4e-39
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   159   6e-39

>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  169 bits (428), Expect = 7e-42
 Identities = 85/152 (55%), Positives = 101/152 (66%), Gaps = 15/152 (9%)
 Frame = +2

Query: 104 RASPASG----PLPCAAPKSANPLS----------ISNGSRVSAMLVWKPYDNKKFETLS 241
           RASPA      P  C    SA P++           SNG RV  M VW P   KKFETLS
Sbjct: 16  RASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLS 75

Query: 242 YLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFG 418
           YLP LSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFG
Sbjct: 76  YLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFG 135

Query: 419 CQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
           C D++ VL+E+ EC K YP AFIR++GFD KR
Sbjct: 136 CNDSSQVLKELEECKKAYPSAFIRIIGFDNKR 167


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  167 bits (422), Expect = 3e-41
 Identities = 82/138 (59%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
 Frame = +2

Query: 107 ASPASGPLPCAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQ 280
           A  +S P P A  K+ N LS   SNG RVS M VW P   KKFETLSYLP LS E +AK+
Sbjct: 28  ACRSSVPFP-ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE 86

Query: 281 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 460
           VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E 
Sbjct: 87  VDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEA 146

Query: 461 AKEYPEAFIRVLGFDAKR 514
            K YPE F+R++GFD KR
Sbjct: 147 KKAYPEYFVRIIGFDNKR 164


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  166 bits (421), Expect = 5e-41
 Identities = 72/129 (55%), Positives = 92/129 (71%)
 Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
           LP +   +A+  S+SNG R+  M VW     KKFETLSYLP LS+E + KQVD+++R  W
Sbjct: 25  LPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 84

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
            PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++
Sbjct: 85  VPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 144

Query: 488 RVLGFDAKR 514
           R++GFD  R
Sbjct: 145 RIIGFDNMR 153


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  165 bits (418), Expect = 1e-40
 Identities = 71/115 (61%), Positives = 89/115 (77%)
 Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 349
           SNG RV  M VW P+ N KFETLSYLPTL+ EQ+ K+V++++R  W PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 350 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
           ++    GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  R
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVR 158


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  165 bits (418), Expect = 1e-40
 Identities = 71/113 (62%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 346
           SNG RV  M VW P   KK+ETLSYLP LS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 347 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFD 505
           REH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFD 162


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  165 bits (417), Expect = 1e-40
 Identities = 73/130 (56%), Positives = 92/130 (70%)
 Frame = +2

Query: 116 ASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMV 295
           ++  LP A   S +  ++SNG R+  M VW  Y NKKFETLSYLP LS++ + KQVD+++
Sbjct: 22  STASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLL 81

Query: 296 RKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYP 475
           R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E+ E  K YP
Sbjct: 82  RNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYP 141

Query: 476 EAFIRVLGFD 505
           +AF RV+GFD
Sbjct: 142 DAFHRVIGFD 151


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  165 bits (417), Expect = 1e-40
 Identities = 78/128 (60%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
 Frame = +2

Query: 137 AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWT 310
           A  K+ N LS   SNG RVS M VW P   KKFETLSYLP LS E +AK+VD+++R  W 
Sbjct: 37  ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWV 96

Query: 311 PCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 490
           PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R
Sbjct: 97  PCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVR 156

Query: 491 VLGFDAKR 514
           ++GFD KR
Sbjct: 157 IIGFDNKR 164


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  165 bits (417), Expect = 1e-40
 Identities = 78/128 (60%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
 Frame = +2

Query: 137 AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWT 310
           A  K+ N LS   SNG RVS M VW P   KKFETLSYLP LS E +AK+VD+++R  W 
Sbjct: 37  ATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWV 96

Query: 311 PCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 490
           PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R
Sbjct: 97  PCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVR 156

Query: 491 VLGFDAKR 514
           ++GFD KR
Sbjct: 157 IIGFDNKR 164


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  165 bits (417), Expect = 1e-40
 Identities = 81/138 (58%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
 Frame = +2

Query: 107 ASPASGPLPCAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQ 280
           A  +S P P A  K+ N LS    NG RVS M VW P   KKFETLSYLP LS E +AK+
Sbjct: 28  ACRSSVPFP-ATRKANNNLSTLPGNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE 86

Query: 281 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 460
           VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E 
Sbjct: 87  VDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEA 146

Query: 461 AKEYPEAFIRVLGFDAKR 514
            K YPE F+R++GFD KR
Sbjct: 147 KKAYPEYFVRIIGFDNKR 164


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  165 bits (417), Expect = 1e-40
 Identities = 76/135 (56%), Positives = 93/135 (68%)
 Frame = +2

Query: 110 SPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDF 289
           S A  P+ C +  S    S+SNG R+  M VW     KKFETLSYLP LS+E + KQVD+
Sbjct: 21  STAGLPISCRSG-STGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDY 79

Query: 290 MVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKE 469
           ++R  W PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KE
Sbjct: 80  LIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 139

Query: 470 YPEAFIRVLGFDAKR 514
           YP+A++RV+GFD  R
Sbjct: 140 YPDAYVRVIGFDNMR 154
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 125
Score (bit) 241.0
E-value 7.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918789|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E03.
         (516 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   241   7e-63
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   170   4e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   169   1e-40
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   168   1e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c...   166   8e-40
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   166   8e-40
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SAX0|Q9SAX0_AEGSE Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SAW9|Q9SAW9_AEGTA Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SAW8|Q9SAW8_TRITI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SAW4|Q9SAW4_SECCE Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   165   1e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  241 bits (616), Expect(2) = 7e-63
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = +2

Query: 140 APKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCI 319
           APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLP L+++QIAKQV++MVRKGWTPCI
Sbjct: 36  APKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCI 95

Query: 320 EFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLG 499
           EFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLG
Sbjct: 96  EFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLG 155

Query: 500 FDAKR 514
           FDAKR
Sbjct: 156 FDAKR 160



 Score = 23.1 bits (48), Expect(2) = 7e-63
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 97  LYKSFSGLRPTTLRCPQERQP 159
           L KSFSGL+  TL  P+   P
Sbjct: 22  LSKSFSGLKANTLFAPKCANP 42


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  172 bits (435), Expect = 1e-41
 Identities = 75/137 (54%), Positives = 96/137 (70%)
 Frame = +2

Query: 101 IRASPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQ 280
           +RA P   P       + +  ++SNGS+   M  W P +NKKFE LSYLP LS + IAK+
Sbjct: 19  LRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKE 78

Query: 281 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 460
           +D+M++KGW PC+EFD++GSV REH    GYYDGRYW +WKLPMFGC D++ VL EI EC
Sbjct: 79  IDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHEC 138

Query: 461 AKEYPEAFIRVLGFDAK 511
            K YP+A+IR L FD K
Sbjct: 139 KKAYPDAYIRCLAFDNK 155


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
           chain OS=Picea sitchensis PE=2 SV=1
          Length = 159

 Score =  170 bits (430), Expect = 4e-41
 Identities = 77/136 (56%), Positives = 99/136 (72%)
 Frame = +2

Query: 107 ASPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVD 286
           +S A+     A PK++N    SNG RV  M VW PY+N KFETLSYLP L+ EQ+ K+V+
Sbjct: 9   SSTAAVAAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVE 68

Query: 287 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 466
           +++R  W PC+EFD+ G + R++    GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK
Sbjct: 69  YLLRNKWVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAK 128

Query: 467 EYPEAFIRVLGFDAKR 514
            YP+AFIRV+GFD  R
Sbjct: 129 AYPKAFIRVIGFDNVR 144


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  169 bits (427), Expect = 1e-40
 Identities = 73/116 (62%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 346
           SNG RV  M VW P   KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VY
Sbjct: 51  SNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVY 110

Query: 347 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
           REH H  GYYDGRYW MWKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD  R
Sbjct: 111 REHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVR 166


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  168 bits (426), Expect = 1e-40
 Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = +2

Query: 110 SPASGPLPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDF 289
           S AS P+P         ++ +NG RV  MLVW P   KKFETLSYLP LS E + K+V++
Sbjct: 23  SMASFPVPRKVNSDITTIA-NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEY 81

Query: 290 MVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 466
           ++RKGW PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC DA+ V++E+ EC K
Sbjct: 82  LLRKGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKK 141

Query: 467 EYPEAFIRVLGFDAKR 514
           EYP AF+R++GFD KR
Sbjct: 142 EYPTAFVRIIGFDNKR 157


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
          Length = 165

 Score =  167 bits (423), Expect = 3e-40
 Identities = 74/129 (57%), Positives = 92/129 (71%)
 Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
           LP +   S +  S+SNG R+  M VW     KKFETLSYLP LS+E + KQVD+++R  W
Sbjct: 21  LPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 80

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
            PC+EF K+G V+REH+   GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++
Sbjct: 81  VPCLEFSKVGFVFREHYSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 140

Query: 488 RVLGFDAKR 514
           RV+GFD  R
Sbjct: 141 RVIGFDNLR 149


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  167 bits (423), Expect = 3e-40
 Identities = 72/116 (62%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
 Frame = +2

Query: 170 SNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 346
           SNG RV  M VW P   KK+ETLSYLP LS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 347 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
           REH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ R
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVR 165


>tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Triticum aestivum GN=rbcS PE=3 SV=1
          Length = 165

 Score =  166 bits (421), Expect = 5e-40
 Identities = 75/129 (58%), Positives = 92/129 (71%)
 Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
           LP +   SA+  S+SNG R+  M VW     KKFETLSYLP LS+E + KQVD+++R  W
Sbjct: 21  LPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 80

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
            PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++
Sbjct: 81  VPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 140

Query: 488 RVLGFDAKR 514
           RV+GFD  R
Sbjct: 141 RVIGFDNLR 149


>tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Aegilops longissima GN=rbcS PE=3
           SV=1
          Length = 165

 Score =  166 bits (421), Expect = 5e-40
 Identities = 75/129 (58%), Positives = 92/129 (71%)
 Frame = +2

Query: 128 LPCAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPTLSSEQIAKQVDFMVRKGW 307
           LP +   SA+  S+SNG R+  M VW     KKFETLSYLP LS+E + KQVD+++R  W
Sbjct: 21  LPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 80

Query: 308 TPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 487
            PC+EF K+G V+REH    GYYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++
Sbjct: 81  VPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 140

Query: 488 RVLGFDAKR 514
           RV+GFD  R
Sbjct: 141 RVIGFDNLR 149


>tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small
           chain OS=Corchorus olitorius PE=2 SV=1
          Length = 183

 Score =  166 bits (421), Expect = 5e-40
 Identities = 82/152 (53%), Positives = 100/152 (65%), Gaps = 15/152 (9%)
 Frame = +2

Query: 104 RASPASGPL--PCAAPKSANPLSI------------SNGSRVSAMLVWKPYDNKKFETLS 241
           RASPA   L  P    KSA+                SNG RV  M VW P   KKFETLS
Sbjct: 14  RASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGKKKFETLS 73

Query: 242 YLPTLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFG 418
           YLP L+  Q+AK+VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFG
Sbjct: 74  YLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFG 133

Query: 419 CQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 514
           C D++ VL+E+ E  K YP+AFIR++GFD +R
Sbjct: 134 CTDSSQVLKELEEAKKAYPDAFIRIIGFDNRR 165