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NBDC - LSDB Archive
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BP918790
Clone id YMU001_000117_E04
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGAAGCCAGTACCAATATATAATTTGATGTACAATATAAAATGCTTGACAAAAATAAGG
CCAATGCCAGCAATGGTATACAAAGGAAAAGTGGAAAAGTTAACGACTAACTTTGCCTAC
TCCTGTAGAAGCCCCTTTCTTTTCTCTGTCCATCACCATTACTGTGATGCCACTCTAATG
AAGCTCCATTGCTCTTCTGAGATGGCCACCTTGGAGCTCCACTGTGCGACTGGCTATAGG
CTTTCGAGCTTCTGTAAGGCTTGCTTAGATCTCCACTGTCTCTCTTTGCCAAATCAAGGG
GCCACCCTTCCAGATGCCAATCTTCTGTTCTGTGTGTGCGTGTGCGATTCTCTGCCGAGT
CACGGTGCCACTGTTGCACATTCCAGTCTT
■■Homology search results ■■ -
sp_hit_id Q9UKJ3
Definition sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens
Align length 58
Score (bit) 32.3
E-value 0.76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918790|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E04.
         (390 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Hom...    32   0.76 
sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegic...    32   1.3  
sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familia...    32   1.3  
sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens ...    31   2.2  
sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila ...    30   2.9  
sp|P15546|COX3_STRPU Cytochrome c oxidase subunit 3 OS=Strongylo...    30   2.9  
sp|Q53EL9|SEZ6_HUMAN Seizure protein 6 homolog OS=Homo sapiens G...    30   3.8  
sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related pr...    30   3.8  
sp|Q12174|YL123_YEAST Putative uncharacterized protein YLR123C O...    30   4.9  
sp|Q7TSK2|SEZ6_MOUSE Seizure protein 6 OS=Mus musculus GN=Sez6 P...    30   4.9  
sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis silvest...    30   4.9  
sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus GN=MNCb...    30   4.9  
sp|Q9Y7U6|RGF1_SCHPO Rho1 guanine nucleotide exchange factor 1 O...    30   4.9  
sp|Q9RZ02|HUTU_DEIRA Urocanate hydratase OS=Deinococcus radiodur...    30   4.9  
sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2        30   4.9  
sp|Q8BWT5|DIP2A_MOUSE Disco-interacting protein 2 homolog A OS=M...    30   4.9  
sp|Q9FEL6|LAX3_MEDTR Auxin transporter-like protein 3 OS=Medicag...    29   6.4  
sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=2     29   6.4  
sp|Q08879|FBLN1_MOUSE Fibulin-1 OS=Mus musculus GN=Fbln1 PE=1 SV=2     29   6.4  
sp|A9MQH4|CAIT_SALAR L-carnitine/gamma-butyrobetaine antiporter ...    29   6.4  
sp|P11596|TRSF_DROME Female-specific protein transformer OS=Dros...    29   6.4  
sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago may...    29   6.4  
sp|Q8IZ63|YS031_HUMAN Putative uncharacterized protein MGC24975 ...    29   8.4  
sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=E...    29   8.4  
sp|A0QRN3|HUTU_MYCS2 Urocanate hydratase OS=Mycobacterium smegma...    29   8.4  
sp|Q9UP79|ATS8_HUMAN A disintegrin and metalloproteinase with th...    29   8.4  

>sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo
           sapiens GN=GPATCH8 PE=1 SV=1
          Length = 1089

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 286 KRDSGDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNGDGQRK-ERGFYRSR 116
           +R     +  ++ S++YS+  S + R PSQ+S      W H + + +    R F RS+
Sbjct: 559 RRSRSTTAHSWQRSRSYSRDRSRSTRSPSQRSGSRKRSWGHESPEERHSGRRDFIRSK 616


>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus
           GN=Egf PE=1 SV=2
          Length = 1133

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +1

Query: 223 CATGYRLSSFCKACLDLHCLSLPNQGATLPDANL---LFCVC 339
           CA GY LS   K C D++  +L N G TL   N+    +C C
Sbjct: 342 CAEGYTLSRDRKYCEDVNECALQNHGCTLGCENIPGSYYCTC 383


>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris
           GN=EGF PE=2 SV=1
          Length = 1216

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 190 CSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANL---LFCVC 339
           C  +  +    CA GY LS   K C D++  +  N G TL   N+    +C C
Sbjct: 332 CGQDSKSYSCTCAEGYTLSQDGKYCEDVNECAFWNHGCTLGCENIPGSYYCTC 384


>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens
           GN=EGF PE=1 SV=1
          Length = 1207

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
 Frame = +1

Query: 175 LMKLHCSSEMATLELH-----CATGYRLSSFCKACLDLHCLSLPNQGATLPDANL---LF 330
           L K +CSS +   +L      CA GY LS   K C D++  +  N G TL   N     +
Sbjct: 320 LRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSYY 379

Query: 331 CVC 339
           C C
Sbjct: 380 CTC 382


>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila
            melanogaster GN=yl PE=1 SV=2
          Length = 1984

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +1

Query: 115  AYSCRSPFLFSVHHHYCDATLMKLHCSSEMATLELHCATGYRLSSFCKACLDL 273
            A +CRS     V  H C AT     CS         C  GYRL +  K+CLD+
Sbjct: 1376 ATACRSASGRQVCQHKCRATPAGAVCS---------CFDGYRLDADQKSCLDI 1419


>sp|P15546|COX3_STRPU Cytochrome c oxidase subunit 3
           OS=Strongylocentrotus purpuratus GN=COIII PE=3 SV=1
          Length = 260

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 93  HFSFVYHCWHWPYFCQAFYIVHQIIYWY 10
           HF F    W+W +    +++++ +IYW+
Sbjct: 231 HFGFEAAAWYWHFVDVVWFVLYWLIYWW 258


>sp|Q53EL9|SEZ6_HUMAN Seizure protein 6 homolog OS=Homo sapiens
           GN=SEZ6 PE=1 SV=2
          Length = 994

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
 Frame = +1

Query: 103 TTNFAYSCRSPFLFSVHHH----YCDATLMKLHCSSEMATLELHCATGYRLSSFCKACLD 270
           T +F Y     +L S H      Y D T+  LH      +   HCATGY+L    K    
Sbjct: 345 TFHFHYQA---YLLSCHFPRRPAYGDVTVTSLHPGG---SARFHCATGYQL----KGARH 394

Query: 271 LHCLSLPNQGATLP--DANLLFCVCVCDSLPSHGAT 372
           L CL+     AT P  D+    C+  C  +  +  T
Sbjct: 395 LTCLN-----ATQPFWDSKEPVCIAACGGVIRNATT 425


>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein
            2 OS=Homo sapiens GN=LRP2 PE=1 SV=3
          Length = 4655

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 124  CRSPFLFSVHHHYCDATLMKLHCSSEMATLELHCATGYRLSSFCKACLDL-HCLSLP 291
            C  P +    H+ C  TL   +CS         C  GY+L S  + C+D+  C  +P
Sbjct: 3114 CHDPSISGCDHN-CTDTLTSFYCS---------CRPGYKLMSDKRTCVDIDECTEMP 3160


>sp|Q12174|YL123_YEAST Putative uncharacterized protein YLR123C
           OS=Saccharomyces cerevisiae GN=YLR123C PE=5 SV=1
          Length = 109

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 99  LFHFSFVYHCWHWPYFCQAFYIVHQIIYWYWL 4
           LFH  F+     WP+FC   + VH+ +Y Y L
Sbjct: 77  LFHTVFIL----WPHFCGILWTVHEKLYNYLL 104


>sp|Q7TSK2|SEZ6_MOUSE Seizure protein 6 OS=Mus musculus GN=Sez6 PE=1
           SV=1
          Length = 991

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
 Frame = +1

Query: 103 TTNFAYSCRSPFLFSVHHH----YCDATLMKLHCSSEMATLELHCATGYRLSSFCKACLD 270
           T +F Y     +L S H      Y D T+  LH      +   HCATGY+L    K    
Sbjct: 342 TFHFRYQA---YLLSCHFPRRPAYGDVTVTSLHPGG---SAHFHCATGYQL----KGARF 391

Query: 271 LHCLSLPNQGATLP--DANLLFCVCVCDSLPSHGAT 372
           L CL+     AT P  D+    C+  C  +  +  T
Sbjct: 392 LTCLN-----ATQPFWDSQEPVCIAACGGVIRNATT 422
tr_hit_id B6NT37
Definition tr|B6NT37|B6NT37_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 56
Score (bit) 38.1
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918790|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E04.
         (390 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6NT37|B6NT37_BRAFL Putative uncharacterized protein (Fragmen...    38   0.22 
tr|B6LHB2|B6LHB2_BRAFL Putative uncharacterized protein (Fragmen...    38   0.22 
tr|B6NT33|B6NT33_BRAFL Putative uncharacterized protein (Fragmen...    38   0.29 
tr|B6NYN3|B6NYN3_BRAFL Putative uncharacterized protein (Fragmen...    37   0.49 
tr|B6PYC1|B6PYC1_BRAFL Putative uncharacterized protein OS=Branc...    36   0.84 
tr|A8KBG4|A8KBG4_XENTR LOC100127663 protein OS=Xenopus tropicali...    35   1.4  
tr|A8XIG6|A8XIG6_CAEBR Putative uncharacterized protein OS=Caeno...    35   1.4  
tr|A8WLW3|A8WLW3_CAEBR Putative uncharacterized protein (Fragmen...    35   1.4  
tr|B6NYN1|B6NYN1_BRAFL Putative uncharacterized protein (Fragmen...    35   1.9  
tr|B6MHV2|B6MHV2_BRAFL Putative uncharacterized protein OS=Branc...    35   1.9  
tr|Q17IS7|Q17IS7_AEDAE Putative uncharacterized protein OS=Aedes...    35   2.4  
tr|B6KZ70|B6KZ70_BRAFL Putative uncharacterized protein (Fragmen...    34   3.2  
tr|A4XT16|A4XT16_PSEMY Putative uncharacterized protein OS=Pseud...    34   3.2  
tr|Q6DFA5|Q6DFA5_XENLA Gas6-prov protein OS=Xenopus laevis GN=ga...    34   4.2  
tr|B6M1Y1|B6M1Y1_BRAFL Putative uncharacterized protein OS=Branc...    34   4.2  
tr|B2B3H5|B2B3H5_PODAN Predicted CDS Pa_6_6220 OS=Podospora anse...    34   4.2  
tr|Q9C8J6|Q9C8J6_ARATH Putative uncharacterized protein F5D21.19...    33   5.4  
tr|Q80TY1|Q80TY1_MOUSE MKIAA0553 protein (Fragment) OS=Mus muscu...    33   5.5  
tr|A2A6A1|A2A6A1_MOUSE G patch domain containing 8 OS=Mus muscul...    33   5.5  
tr|B6PZF5|B6PZF5_BRAFL Putative uncharacterized protein (Fragmen...    33   7.1  
tr|B6LHB8|B6LHB8_BRAFL Putative uncharacterized protein (Fragmen...    33   7.1  
tr|A2ECF7|A2ECF7_TRIVA Surface antigen BspA-like OS=Trichomonas ...    33   7.1  
tr|B5WPX6|B5WPX6_9BURK NADH:flavin oxidoreductase/NADH oxidase O...    33   9.3  
tr|B8PJM9|B8PJM9_9APHY Predicted protein OS=Postia placenta Mad-...    33   9.3  

>tr|B6NT37|B6NT37_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_235815 PE=4 SV=1
          Length = 288

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 187 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLLFCV-CVCDS 351
           HC++ + + +  C+TGYRL+S   AC D+      N G     +N +    CVCD+
Sbjct: 219 HCTNNLGSFDCSCSTGYRLNSDGMACDDVDECHTANGGCEQTCSNTIGSFQCVCDN 274



 Score = 33.5 bits (75), Expect = 5.4
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
 Frame = +1

Query: 109 NFAYSCRSPFLFSVHHHYCDATL--------MKLHCSSEMATLELHCATGYRLSSFCKAC 264
           +F   C + F  +V  + CD            + +C++ + +    C TGYRL+S  + C
Sbjct: 21  SFECFCVTGFNLNVDSYTCDDVNECNVGNDGCQQNCNNIIGSYWCSCGTGYRLNSDSRTC 80

Query: 265 LDLHCLSLPNQGATLPDANLL---FCVC 339
            D+   S  N G T    N +   +C C
Sbjct: 81  ADVDECSGANGGCTQTCTNTISSFYCSC 108


>tr|B6LHB2|B6LHB2_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_206286 PE=4 SV=1
          Length = 346

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
 Frame = +1

Query: 28  MYNIKCLTKIRPMPAMVY---------KGKVEKLTTN----FAYSCRSPFLFSVHHHYCD 168
           MY + C    RP P  +Y          G  + + TN    F  SC + F  +V    CD
Sbjct: 1   MYLLYCE---RPFPCRLYADIDECSAANGGCDHVCTNTIGSFQCSCVTGFNLNVDSFTCD 57

Query: 169 ATL--------MKLHCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANL 324
                       + +C++ + +    C TGYRL+S  + C D+   S+ N G      NL
Sbjct: 58  DVDECNVGNDGCQQNCNNIIGSYWCSCGTGYRLNSDSRTCADIDECSIGNGGCGQTCTNL 117

Query: 325 LFCV-CVCD---SLPSHGAT 372
           +    C C    SL S+G T
Sbjct: 118 IGSFQCSCQNGYSLNSNGFT 137


>tr|B6NT33|B6NT33_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_235857 PE=4 SV=1
          Length = 338

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
 Frame = +1

Query: 109 NFAYSCRSPFLFSVHHHYCDATL--------MKLHCSSEMATLELHCATGYRLSSFCKAC 264
           +F  SC   F  +V  H CD            + +C++ + +    C TGYRL+S  + C
Sbjct: 22  SFQCSCVDGFNLNVDSHTCDDVDECNVGNDGCQQNCNNIIGSYWCSCGTGYRLNSDSRTC 81

Query: 265 LDLHCLSLPNQGATLPDANLLFCV-CVCD---SLPSHGAT 372
            D+   S+ N G      NL+    C C    SL S G T
Sbjct: 82  ADIDECSIGNGGCEQTCTNLIGSFQCSCRNGYSLNSDGYT 121


>tr|B6NYN3|B6NYN3_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_239184 PE=4 SV=1
          Length = 331

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
 Frame = +1

Query: 109 NFAYSCRSPFLFSVHHHYCDATL--------MKLHCSSEMATLELHCATGYRLSSFCKAC 264
           +F  SC   F  +V  + CD            + +C++ + +    C TGYRL+S  + C
Sbjct: 18  SFQCSCVDGFNLNVDSYTCDDVDECNVGNDGCQQNCNNIIGSYWCSCGTGYRLNSDSRTC 77

Query: 265 LDLHCLSLPNQGATLPDANLLFCV-CVCD---SLPSHGAT 372
            D++  S+ N G      NL+    C C    SL S G T
Sbjct: 78  ADINECSIANGGCGQTCTNLIGSFQCSCQNGYSLNSDGFT 117


>tr|B6PYC1|B6PYC1_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_112416 PE=4 SV=1
          Length = 2697

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +1

Query: 106  TNFAYSCRSPFLFSVHHHYCDATL--------MKLHCSSEMATLELHCATGYRLSSFCKA 261
            ++F  SC + +  + +  +CD            + HC++ + + +  C+TGYRL+S   A
Sbjct: 916  SSFYCSCGNGYNLNANGFFCDDVDECASGNGGCEQHCTNNIGSFDCSCSTGYRLNSDALA 975

Query: 262  CLDLHCLSLPNQG 300
            C D++     N G
Sbjct: 976  CDDVNECDTANGG 988



 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
 Frame = +1

Query: 109  NFAYSCRSPFLFSVHHHYCDAT--------LMKLHCSSEMATLELHCATGYRLSSFCKAC 264
            +F  SC + F  +V    CD          + + +C++ + +    C TGYRL+S  + C
Sbjct: 835  SFQCSCVTGFNLNVDSSTCDDVDECNVGNDVCQQNCNNIIGSYWCSCGTGYRLNSDSRTC 894

Query: 265  LDLHCLSLPNQGATLPDANLL---FCVC 339
             D+   S  N G     AN +   +C C
Sbjct: 895  ADVDECSGANGGCAQACANTISSFYCSC 922


>tr|A8KBG4|A8KBG4_XENTR LOC100127663 protein OS=Xenopus tropicalis
           GN=egf PE=2 SV=1
          Length = 1051

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +1

Query: 145 SVHHHYCDATLMKLHCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANL 324
           S+ + +C  T     C  +    + HC  G+ LSS  + C D++  +L N G TL   N+
Sbjct: 324 SISNKHCTKT-----CEIDAENQKCHCMNGFVLSSNGRYCEDINECALWNHGCTLGCENI 378

Query: 325 ---LFCVC 339
               FC C
Sbjct: 379 PGSYFCTC 386


>tr|A8XIG6|A8XIG6_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG13676 PE=4 SV=1
          Length = 411

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/88 (28%), Positives = 40/88 (45%)
 Frame = -3

Query: 385 WNVQQWHRDSAENRTRTHRTEDWHLEGWPLDLAKRDSGDLSKPYRSSKAYSQSHSGAPRW 206
           W   +   ++ E   R    E    E W   L + D G   +    +K  +Q H  A R 
Sbjct: 186 WRAAEKAEETIEELERALLKERKTSEKWRNQL-EHDEGKKRETLSGNKEKTQVH--ARRS 242

Query: 205 PSQKSNGASLEWHHSNGDGQRKERGFYR 122
           PS+ SNG+S++WH+   + +  E  FY+
Sbjct: 243 PSRSSNGSSVDWHNEKKERKTGE-SFYK 269


>tr|A8WLW3|A8WLW3_CAEBR Putative uncharacterized protein (Fragment)
           OS=Caenorhabditis briggsae GN=CBG24980 PE=4 SV=1
          Length = 702

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = -3

Query: 310 EGWPLDLAKRDSGDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNGDGQRKER 134
           E W   L + D G   + +  +K  +Q H  A R PS+ SNG+S++WH+     +RKER
Sbjct: 209 EKWRNQL-EHDEGKKREKFSGNKEKTQVH--ARRSPSRSSNGSSVDWHN-----ERKER 259


>tr|B6NYN1|B6NYN1_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_239208 PE=4 SV=1
          Length = 331

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
 Frame = +1

Query: 109 NFAYSCRSPFLFSVHHHYCDATL--------MKLHCSSEMATLELHCATGYRLSSFCKAC 264
           +F  SC   F  +V  + CD            + +C++ + +    C TGYRL+S  + C
Sbjct: 18  SFQCSCVDGFNLNVDSYTCDDVDECNVGNDGCQQNCNNIIGSYWCSCGTGYRLNSDSRTC 77

Query: 265 LDLHCLSLPNQGATLPDANLLFCV-CVCD---SLPSHGAT 372
            D+   S+ N G      NL+    C C    SL S G T
Sbjct: 78  ADIDECSIGNGGCGQTCTNLIGSFQCSCRNGYSLNSDGFT 117


>tr|B6MHV2|B6MHV2_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_82621 PE=4 SV=1
          Length = 2045

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = -3

Query: 373  QWHRDSAENRTRTHRTEDWHLEGWPLDLAKRDSGDLSKPYRSS---KAYSQSHSGAPRWP 203
            +W RD   +R R HR  D     +      RDS D S+   SS   +A ++   G+ R  
Sbjct: 1886 RWDRDRDRDRERDHRDRDRGDRDYRSSRDHRDSRDSSRGDSSSRHHRAGNKEDGGSHRST 1945

Query: 202  SQKSNG-ASLEWHHSNGDGQRKER 134
               S+G      HHS  D +R++R
Sbjct: 1946 RPDSSGERDQRLHHSQSDHKRRKR 1969