BP918793
Clone id YMU001_000117_E07
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTTGCAACCTAGAACAGCATCGGTGATTAAGGTTGGCGAAAAGAAATCCGTCAAACTGAT
ACTAAAGCAGGAAAGGGATTTGCTTGTTACGTTAGGAAGAAATTTGTGCGTGGAGTTCTT
GGCTTCAGCAAAAGGATCATCTCTTGGCAGCATGAAGTGCTAGACAATGAGAAGGTTCAA
TTGGAATTGAGTATTTTCAAGACAGACAGAATGGGGCCAAGTATCACGAGTGACTGTTTG
TATGGCCCATGACCAGATTTGTTACACAGTAACTTTCGATGGTTTAACGGACTTCTCTGC
TGCCCAAGTTTTTAACAGGGCAGCAAGAAATAGGGAAAGGCAGTGGATTTGATTTATTGA
TTAGGCTTTACATACATGACATTGTCAATTTAACAATTAGTAATGGTTAGGATGTTTGTA
AAACAGCGGCAAATTTTAAGACAACACGGCAGAGGGCTTTGAGGGCCAGTTCCAGGATTT
CACATTTTTATATTTTAAACATCTGATTGACATCAGCCTTTGAAATGTAATTTTATTTGG
CT
■■Homology search results ■■ -
sp_hit_id A8GFK5
Definition sp|A8GFK5|Y2794_SERP5 UPF0502 protein Spro_2794 OS=Serratia proteamaculans (strain 568)
Align length 34
Score (bit) 30.8
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918793|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E07.
(542 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8GFK5|Y2794_SERP5 UPF0502 protein Spro_2794 OS=Serratia prot... 31 4.5
sp|Q7MYM5|WZYE_PHOLL Putative ECA polymerase OS=Photorhabdus lum... 30 5.8
sp|Q6D471|Y2523_ERWCT UPF0502 protein ECA2523 OS=Erwinia carotov... 30 7.6
sp|Q6CZF1|WZYE_ERWCT Putative ECA polymerase OS=Erwinia carotovo... 30 9.9

>sp|A8GFK5|Y2794_SERP5 UPF0502 protein Spro_2794 OS=Serratia
proteamaculans (strain 568) GN=Spro_2794 PE=3 SV=1
Length = 214

Score = 30.8 bits (68), Expect = 4.5
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1

Query: 91 VRKKFVRGVLGFSKRIISWQHEVLDNEKVQLELS 192
++K F+R + GF R++ ++H ++E QL+LS
Sbjct: 63 LKKHFLRTLSGFGNRVVKYEHRFCNSEFGQLKLS 96


>sp|Q7MYM5|WZYE_PHOLL Putative ECA polymerase OS=Photorhabdus
luminescens subsp. laumondii GN=wzyE PE=3 SV=1
Length = 459

Score = 30.4 bits (67), Expect = 5.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3

Query: 537 NKITFQRLMSIRCLKYKNVKSWNWPSKPSAVLS 439
+KI FQ L I Y + SW WP +P AVL+
Sbjct: 282 DKIDFQGLAPIIRDFYVFIPSWLWPGRPDAVLN 314


>sp|Q6D471|Y2523_ERWCT UPF0502 protein ECA2523 OS=Erwinia carotovora
subsp. atroseptica GN=ECA2523 PE=3 SV=1
Length = 212

Score = 30.0 bits (66), Expect = 7.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1

Query: 91 VRKKFVRGVLGFSKRIISWQHEVLDNEKVQLELS 192
V+K F+R + GF R++ ++H ++E L+LS
Sbjct: 63 VKKHFLRTLSGFGNRVVKYEHRFCNSEFGDLKLS 96


>sp|Q6CZF1|WZYE_ERWCT Putative ECA polymerase OS=Erwinia carotovora
subsp. atroseptica GN=wzyE PE=3 SV=1
Length = 463

Score = 29.6 bits (65), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3

Query: 537 NKITFQRLMSIRCLKYKNVKSWNWPSKPSAVLS 439
+KI FQ L I Y + SW WP +P+ VL+
Sbjct: 282 DKIEFQGLAPIARDFYVFIPSWLWPDRPNLVLN 314


tr_hit_id Q9D8K9
Definition tr|Q9D8K9|Q9D8K9_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 65
Score (bit) 34.3
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918793|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E07.
(542 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9D8K9|Q9D8K9_MOUSE Putative uncharacterized protein OS=Mus m... 34 4.4
tr|Q70WJ7|Q70WJ7_LENCU Putative resistance gene analogue protein... 33 9.7
tr|B0CP75|B0CP75_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.7

>tr|Q9D8K9|Q9D8K9_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=1810062G17Rik PE=2 SV=1
Length = 129

Score = 34.3 bits (77), Expect = 4.4
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1

Query: 118 LGFSKRIISWQHEVLDNEKVQLELSI--FKTDRMGPSITSDCLYGP*PDLLHSNFRWFNG 291
+G S + +WQ + L E V L S FK R P PDLLH++ RW+N
Sbjct: 1 MGSSFKSCTWQCQSLKAEMVSLPNSACNFKDPRCKP-----------PDLLHTHGRWYNP 49

Query: 292 LLCCP 306
LL P
Sbjct: 50 LLLQP 54


>tr|Q70WJ7|Q70WJ7_LENCU Putative resistance gene analogue protein
(Fragment) OS=Lens culinaris GN=rga PE=4 SV=1
Length = 277

Score = 33.1 bits (74), Expect = 9.7
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2

Query: 206 TEWGQVSRVTVCMAHDQI--CYTVTFDGLTDFSAAQVF 313
TEW +V C+ HDQ+ V+FDGL D + Q+F
Sbjct: 186 TEWHKVLEKLKCIPHDQVQKKLRVSFDGLKDVTEQQIF 223


>tr|B0CP75|B0CP75_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_301754 PE=4 SV=1
Length = 1916

Score = 33.1 bits (74), Expect = 9.7
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -3

Query: 255 WSWAIQTVTRDTWPHSVCLENTQFQLNLLIV*HFMLPRDDPFAEAKNSTHKFLPNVTSKS 76
W + + ++ WP S +NT+ +N+L+ R P + FLP +T S
Sbjct: 141 WKPLWRVLQKELWPKSNIRDNTRNLVNILLYVAEQCKRHFPAQDIPEMLETFLPLLTPDS 200

Query: 75 LSCFSISLTDFFSPT 31
+ + LT F P+
Sbjct: 201 VLVITPVLTSFLPPS 215