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NBDC - LSDB Archive
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BP918794
Clone id YMU001_000117_E08
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCTCGGATTGATGATATACTTGATAAGTTGCAGGGTGCGTGTCTTTGTCGCATAGACTT
AAAGAGTGGGTATCATCAGATACGGATCGCCCCTGAGGATGTCCATAAGACTGCTTTCCG
CACAACCTTTGGACTATATGAATTCTTGGTAATGCCTTTCGGCTTGACCAATGCTCCTGC
GACGTTCAATCGCATGATGGACCGCATTTTCAGCCCGTATCGAGCTTTTACGGGAGTATT
CTTTGACGACATACTCATCTTCTCTAAGTCAGAAGAGGAACATCGGAAGCACTTGGACTT
AGTGTTTCAAGAATTGTGAAAGCATGAGTCGCATGTGAATGCAAAGAAGAGCGAGTTCTT
TCTCTCTGAGATACACTATCTCGGCCATATAGTCTCCCACAATAAAGTGAGTATGGATCC
TGCCAAGATCCGAGTGGTAGAAGATTGGCCTATTCCCACTACGGTACATGATGTACGT
■■Homology search results ■■ -
sp_hit_id Q7LHG5
Definition sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae
Align length 156
Score (bit) 130.0
E-value 3.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918794|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E08.
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...   130   3e-30
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...   130   3e-30
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...   130   3e-30
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra...   125   1e-28
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra...   120   2e-27
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra...   115   1e-25
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...   107   4e-23
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...   104   2e-22
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...   104   2e-22
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...    99   1e-20
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot...    98   2e-20
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ...    94   4e-19
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ...    94   4e-19
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ...    94   4e-19
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ...    94   4e-19
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ...    92   9e-19
sp|P27502|POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform vi...    92   1e-18
sp|P31843|RRPO_OENBE RNA-directed DNA polymerase homolog OS=Oeno...    89   1e-17
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha...    86   7e-17
sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic m...    77   5e-14
sp|P09523|POL_FMVD Enzymatic polyprotein OS=Figwort mosaic virus...    77   5e-14
sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf...    74   3e-13
sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing...    73   6e-13
sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing...    73   6e-13
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ...    69   1e-11
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin...    62   2e-09
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr...    58   2e-08
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=p...    57   3e-08
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (...    53   6e-07
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen...    53   8e-07

>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score =  130 bits (327), Expect = 3e-30
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2    PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRID++L ++  A +   +DL SGYHQI + P+D +KTAF T  G YE+ VMPFGL NAP
Sbjct: 693  PRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAP 752

Query: 179  ATFNRMMDRIFSPYRAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSEF 358
            +TF R M   F   R F  V+ DDILIFS+S EEH KHLD V + L      V  KK +F
Sbjct: 753  STFARYMADTFRDLR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKF 811

Query: 359  FLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTV 466
               E  +LG+ +   K++    K   + D+P P TV
Sbjct: 812  ASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTV 847


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score =  130 bits (327), Expect = 3e-30
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2    PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRID++L ++  A +   +DL SGYHQI + P+D +KTAF T  G YE+ VMPFGL NAP
Sbjct: 667  PRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAP 726

Query: 179  ATFNRMMDRIFSPYRAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSEF 358
            +TF R M   F   R F  V+ DDILIFS+S EEH KHLD V + L      V  KK +F
Sbjct: 727  STFARYMADTFRDLR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKF 785

Query: 359  FLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTV 466
               E  +LG+ +   K++    K   + D+P P TV
Sbjct: 786  ASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTV 821


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score =  130 bits (327), Expect = 3e-30
 Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 3/162 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGAC--LCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNA 175
           P +D+IL KL G C     IDL  G+HQI + PE V KTAF T  G YE+L MPFGL NA
Sbjct: 283 PNMDEILGKL-GRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNA 341

Query: 176 PATFNRMMDRIFSP-YRAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKS 352
           PATF R M+ I  P       V+ DDI++FS S +EH + L LVF++L K    +   K 
Sbjct: 342 PATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKC 401

Query: 353 EFFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           EF   E  +LGH+++ + +  +P KI  ++ +PIPT   +++
Sbjct: 402 EFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIK 443


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
           transposon 297 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1059

 Score =  125 bits (313), Expect = 1e-28
 Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGAC--LCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNA 175
           P +D+IL KL G C     IDL  G+HQI +  E + KTAF T  G YE+L MPFGL NA
Sbjct: 282 PNMDEILGKL-GKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 176 PATFNRMMDRIFSP-YRAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKS 352
           PATF R M+ I  P       V+ DDI+IFS S  EH   + LVF +L      +   K 
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 353 EFFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           EF   E ++LGHIV+ + +  +P K++ +  +PIPT   ++R
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIR 442


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
           transposon opus OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1003

 Score =  120 bits (302), Expect = 2e-27
 Identities = 61/143 (42%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
 Frame = +2

Query: 53  IDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAPATFNRMMDRIFSPYRA-F 229
           +DL SG+HQI +   D+ KTAF T  G YEFL +PFGL NAPA F RM+D I   +    
Sbjct: 217 LDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKV 276

Query: 230 TGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSEFFLSEIHYLGHIVSHNKV 409
             V+ DDI++FS+  + H K+L LV   L K    VN +KS F  +++ +LG+IV+ + +
Sbjct: 277 CYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGI 336

Query: 410 SMDPAKIRVVEDWPIPTTVHDVR 478
             DP K+R + + P PT+V +++
Sbjct: 337 KADPKKVRAISEMPPPTSVKELK 359


>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
           transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1035

 Score =  115 bits (287), Expect = 1e-25
 Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
 Frame = +2

Query: 53  IDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAPATFNRMMDRIF-SPYRAF 229
           +DLKSGYHQI +A  D  KT+F    G YEF  +PFGL NA + F R +D +        
Sbjct: 276 LDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKI 335

Query: 230 TGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSEFFLSEIHYLGHIVSHNKV 409
             V+ DD++IFS++E +H +H+D V + L      V+ +K+ FF   + YLG IVS +  
Sbjct: 336 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 395

Query: 410 SMDPAKIRVVEDWPIPTTVHDVR 478
             DP K++ ++++P P  V+ VR
Sbjct: 396 KSDPEKVKAIQEYPEPDCVYKVR 418


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score =  107 bits (266), Expect = 4e-23
 Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
           P I+ +L K+QG+ +  ++DLKS YH IR+   D HK AFR   G++E+LVMP+G++ AP
Sbjct: 483 PLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542

Query: 179 ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
           A F   ++ I    + +    + DDILI SKSE EH KH+  V Q+L      +N  K E
Sbjct: 543 AHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602

Query: 356 FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           F  S++ ++G+ +S    +     I  V  W  P    ++R
Sbjct: 603 FHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELR 643


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score =  104 bits (259), Expect = 2e-22
 Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
           P I+ +L K+QG+ +  ++DLKS YH IR+   D HK AFR   G++E+LVMP+G++ AP
Sbjct: 483 PLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAP 542

Query: 179 ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
           A F   ++ I    + +    + D+ILI SKSE EH KH+  V Q+L      +N  K E
Sbjct: 543 AHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602

Query: 356 FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           F  S++ ++G+ +S    +     I  V  W  P    ++R
Sbjct: 603 FHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELR 643


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score =  104 bits (259), Expect = 2e-22
 Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
           P I+ +L K+QG+ +  ++DLKS YH IR+   D HK AFR   G++E+LVMP+G++ AP
Sbjct: 483 PLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAP 542

Query: 179 ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
           A F   ++ I    + +    + D+ILI SKSE EH KH+  V Q+L      +N  K E
Sbjct: 543 AHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602

Query: 356 FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           F  S++ ++G+ +S    +     I  V  W  P    ++R
Sbjct: 603 FHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELR 643


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
           transposon 412 OS=Drosophila melanogaster GN=POL PE=4
           SV=1
          Length = 1237

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
 Frame = +2

Query: 2   PRIDDILDKLQGA----CLCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLT 169
           PRIDDILD+L  A    CL   DL SG+HQI +       T+F T+ G Y F  +PFGL 
Sbjct: 391 PRIDDILDQLGRAKYFSCL---DLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLK 447

Query: 170 NAPATFNRMMDRIFS---PYRAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVN 340
            AP +F RMM   FS   P +AF  ++ DD+++   SE+   K+L  VF +  ++   ++
Sbjct: 448 IAPNSFQRMMTIAFSGIEPSQAF--LYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLH 505

Query: 341 AKKSEFFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            +K  FF+ E+ +LGH  +   +  D  K  V++++P+P      R
Sbjct: 506 PEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSAR 551
tr_hit_id O64892
Definition tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus
Align length 161
Score (bit) 183.0
E-value 3.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918794|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_E08.
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus ...   183   3e-45
tr|B4YF15|B4YF15_ANACO Polyprotein (Fragment) OS=Ananas comosus ...   177   3e-43
tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa s...   175   1e-42
tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   175   1e-42
tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gy...   175   1e-42
tr|Q01I31|Q01I31_ORYSA OSIGBa0145G11.8 protein OS=Oryza sativa G...   175   1e-42
tr|Q9XE85|Q9XE85_SORBI Polyprotein OS=Sorghum bicolor PE=4 SV=1       174   1e-42
tr|Q0DC29|Q0DC29_ORYSJ Os06g0493000 protein OS=Oryza sativa subs...   173   3e-42
tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ...   173   3e-42
tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa s...   173   4e-42
tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gy...   173   4e-42
tr|Q8W5B7|Q8W5B7_ORYSA Putative polyprotein OS=Oryza sativa GN=O...   172   6e-42
tr|Q65WY1|Q65WY1_ORYSJ Putative polyprotein OS=Oryza sativa subs...   172   6e-42
tr|Q2R4W7|Q2R4W7_ORYSJ Retrotransposon protein, putative, Ty3-gy...   172   6e-42
tr|Q10GH3|Q10GH3_ORYSJ Retrotransposon protein, putative, Ty3-gy...   172   6e-42
tr|Q7XM76|Q7XM76_ORYSA OSJNBa0079C19.6 protein OS=Oryza sativa G...   172   7e-42
tr|Q7XK08|Q7XK08_ORYSJ OSJNBa0061C08.12 protein OS=Oryza sativa ...   172   7e-42
tr|Q6UU19|Q6UU19_ORYSJ Putative gag-pol polyprotein OS=Oryza sat...   172   7e-42
tr|Q2RB45|Q2RB45_ORYSJ Retrotransposon protein, putative, Ty3-gy...   172   7e-42
tr|Q2QR37|Q2QR37_ORYSJ Retrotransposon protein, putative, Ty3-gy...   172   7e-42
tr|Q10NV6|Q10NV6_ORYSJ Retrotransposon protein, putative, Ty3-gy...   172   7e-42
tr|Q6L3S3|Q6L3S3_SOLDE Putative gag-pol polyprotein, identical O...   172   1e-41
tr|Q6L3S2|Q6L3S2_SOLDE Putative retrotransposon protein, identic...   172   1e-41
tr|Q60DH0|Q60DH0_ORYSJ Putative polyprotein OS=Oryza sativa subs...   172   1e-41
tr|Q53PB2|Q53PB2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   172   1e-41
tr|Q9AYB6|Q9AYB6_ORYSA Polyprotein OS=Oryza sativa GN=OSJNBa0094...   171   1e-41
tr|Q94I04|Q94I04_ORYSA Putative retroelement OS=Oryza sativa GN=...   171   1e-41
tr|Q8S6Z5|Q8S6Z5_ORYSJ Putative polyprotein OS=Oryza sativa subs...   171   1e-41
tr|Q8LSR7|Q8LSR7_ORYSJ Putative polyprotein (Retrotransposon pro...   171   1e-41
tr|Q7XS19|Q7XS19_ORYSJ OSJNBa0080E14.17 protein (OSJNBa0022F16.2...   171   1e-41

>tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus
           PE=4 SV=1
          Length = 871

 Score =  183 bits (465), Expect = 3e-45
 Identities = 86/161 (53%), Positives = 121/161 (75%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
           PRIDD+ D+LQG+C+  +IDL+SGYHQ++I PEDV KTAFRT +G YEF VMPFGLTNAP
Sbjct: 88  PRIDDLFDQLQGSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGHYEFAVMPFGLTNAP 147

Query: 179 ATFNRMMDRIFSPY-RAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
             F  +M+R+F PY   F  VF DDIL++S+S+ +H +HL +V Q L + E +V  KK E
Sbjct: 148 TAFMDLMNRVFKPYLDRFVVVFIDDILVYSRSDADHEEHLRIVLQVLREKELYVKLKKCE 207

Query: 356 FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           F+L E+ +LGH++S + +++DP KI  ++DWP  T+V ++R
Sbjct: 208 FWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIR 248


>tr|B4YF15|B4YF15_ANACO Polyprotein (Fragment) OS=Ananas comosus
           PE=4 SV=1
          Length = 953

 Score =  177 bits (448), Expect = 3e-43
 Identities = 87/161 (54%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
           P +D++LD+L GA L   +DL+SGYHQIR+  +D+ KTAFRT  G YEFLVMPFGLTNAP
Sbjct: 300 PLVDELLDELSGAKLFSELDLRSGYHQIRMHADDISKTAFRTHEGHYEFLVMPFGLTNAP 359

Query: 179 ATFNRMMDRIFSPY-RAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
           +TF  +M+ IF PY R F  VFFDDIL++SK  EEH  HL   FQ L +H   V  KK  
Sbjct: 360 STFQGLMNHIFKPYLRRFILVFFDDILVYSKGVEEHLCHLRTTFQVLRQHSLFVRRKKCI 419

Query: 356 FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
           F   ++ YLGH++SH  VSMD  K+  +++WP+PTT  ++R
Sbjct: 420 FAAVQLEYLGHVISHEGVSMDKKKVEAIQEWPLPTTAKELR 460


>tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa subsp.
            japonica GN=OSJNBa0019D11.8 PE=4 SV=1
          Length = 1470

 Score =  175 bits (443), Expect = 1e-42
 Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGA-CLCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRIDD+ D+L+GA    +IDL+SGYHQ++I  ED+ KTAF T +GLYEF VM FGLTNAP
Sbjct: 613  PRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAP 672

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  +M+++F  Y   F  VF DDILI+SK EEEH +HL LV Q+L KH+ +    K E
Sbjct: 673  AYFMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F+L E+ +LGH++S   V++DPAK+  V +W  P +V ++R
Sbjct: 733  FWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIR 773


>tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os10g28930 PE=4 SV=1
          Length = 1470

 Score =  175 bits (443), Expect = 1e-42
 Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGA-CLCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRIDD+ D+L+GA    +IDL+SGYHQ++I  ED+ KTAF T +GLYEF VM FGLTNAP
Sbjct: 613  PRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAP 672

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  +M+++F  Y   F  VF DDILI+SK EEEH +HL LV Q+L KH+ +    K E
Sbjct: 673  AYFMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F+L E+ +LGH++S   V++DPAK+  V +W  P +V ++R
Sbjct: 733  FWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIR 773


>tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g28690 PE=4 SV=1
          Length = 1470

 Score =  175 bits (443), Expect = 1e-42
 Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGA-CLCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRIDD+ D+L+GA    +IDL+SGYHQ++I  ED+ KTAF T +GLYEF VM FGLTNAP
Sbjct: 613  PRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAP 672

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  +M+++F  Y   F  VF DDILI+SK EEEH +HL LV Q+L KH+ +    K E
Sbjct: 673  AYFMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F+L E+ +LGH++S   V++DPAK+  V +W  P +V ++R
Sbjct: 733  FWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIR 773


>tr|Q01I31|Q01I31_ORYSA OSIGBa0145G11.8 protein OS=Oryza sativa
            GN=OSIGBa0145G11.8 PE=4 SV=1
          Length = 1470

 Score =  175 bits (443), Expect = 1e-42
 Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGA-CLCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRIDD+ D+L+GA    +IDL+SGYHQ++I  ED+ KTAF T +GLYEF VM FGLTNAP
Sbjct: 613  PRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAP 672

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  +M+++F  Y   F  VF DDILI+SK EEEH +HL LV Q+L KH+ +    K E
Sbjct: 673  AYFMNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F+L E+ +LGH++S   V++DPAK+  V +W  P +V ++R
Sbjct: 733  FWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIR 773


>tr|Q9XE85|Q9XE85_SORBI Polyprotein OS=Sorghum bicolor PE=4 SV=1
          Length = 1484

 Score =  174 bits (442), Expect = 1e-42
 Identities = 83/161 (51%), Positives = 119/161 (73%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRIDD+ D+L+GAC+  +IDL+SGYHQ++I   D+ KTAF T +GLYE+ VM FGLTNAP
Sbjct: 631  PRIDDLFDQLRGACVFSKIDLRSGYHQLKIRNSDIPKTAFTTRYGLYEYTVMSFGLTNAP 690

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  MM+++F  Y   F  VF DDIL+FSK++EEH +HL LV Q+L +H+ +    K E
Sbjct: 691  AYFMYMMNKVFMEYLDKFVVVFIDDILVFSKTKEEHAEHLRLVLQKLREHKLYAKRSKCE 750

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F+L E+ +LGH+VS+  +++DP+K++ V +W  PT V ++R
Sbjct: 751  FWLEEVSFLGHVVSNGGIAVDPSKVKDVLNWKPPTDVSEIR 791


>tr|Q0DC29|Q0DC29_ORYSJ Os06g0493000 protein OS=Oryza sativa subsp.
            japonica GN=Os06g0493000 PE=4 SV=1
          Length = 1573

 Score =  173 bits (439), Expect = 3e-42
 Identities = 86/161 (53%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            P I+D+LD+LQGA +  +IDL+SGYHQIR+   DVHKTAF T  G +E+LVMPFGLTNAP
Sbjct: 746  PVIEDLLDELQGAQIFSKIDLRSGYHQIRMHAADVHKTAFSTHLGHFEYLVMPFGLTNAP 805

Query: 179  ATFNRMMDRIFSPY-RAFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            ATF  +M++I +PY R F  VFFDDILI+SKS  EH +HL LV Q L  H+      K  
Sbjct: 806  ATFQALMNKILAPYLRKFVLVFFDDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCV 865

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F   ++ YLG+I+S + V+ DP K++ V++WP PT++ ++R
Sbjct: 866  FGQDQVEYLGYIISSSGVATDPVKVQAVQNWPTPTSITELR 906


>tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris PE=4
            SV=1
          Length = 1501

 Score =  173 bits (439), Expect = 3e-42
 Identities = 86/161 (53%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGACL-CRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRIDD+ D+L GA +  +IDL+SGYHQ+R+A +DV KTAFRT +G YEF VMPFGLTNAP
Sbjct: 631  PRIDDLFDQLNGASVFSKIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNAP 690

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  +M+RIF  +   F  VF DDILI+S++E EH +HL ++ + L K++ +    K E
Sbjct: 691  AIFMDLMNRIFHEFLDKFVVVFIDDILIYSRNETEHDEHLRIILETLRKNQLYAKFSKCE 750

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F L ++ +LGH VS   VS+DPAKI+ V +WP P +V D+R
Sbjct: 751  FRLEKVAFLGHFVSKEGVSVDPAKIQAVSEWPTPKSVTDIR 791


>tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa subsp.
            japonica GN=OSJNBa0059D20.6 PE=4 SV=2
          Length = 1470

 Score =  173 bits (438), Expect = 4e-42
 Identities = 84/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    PRIDDILDKLQGA-CLCRIDLKSGYHQIRIAPEDVHKTAFRTTFGLYEFLVMPFGLTNAP 178
            PRID++ D+L+GA    +IDL+SGYHQ++I  ED+ KTAF T +GLYEF VM FGLTNAP
Sbjct: 613  PRIDNLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAP 672

Query: 179  ATFNRMMDRIFSPYR-AFTGVFFDDILIFSKSEEEHRKHLDLVFQEL*KHESHVNAKKSE 355
            A F  +M+++F  Y   F  VF DDILI+SK EEEH +HL LV Q+L KH+ +    K E
Sbjct: 673  AYFMNLMNKVFMEYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732

Query: 356  FFLSEIHYLGHIVSHNKVSMDPAKIRVVEDWPIPTTVHDVR 478
            F+L E+ +LGH++S   V++DPAK+  V +W  P +V ++R
Sbjct: 733  FWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIR 773