BP918803
Clone id YMU001_000117_F05
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGAAACGTAAGGCTGATCATTATGTAGACTTAATTAAAACATCCAAAGGGTGTGCTACAT
TGCGCATAAATGCGTAGCTAGGTAAGCTATCCACAAAAAAAAACATTCACTTAGATCCGC
TCAAAATGGAGGGTTCAAAATCCATAAAGTACACCGTTGTATAAGTATAGTGTCAATTGA
GTTCATATGCTGGATATGCTCCCAAAACACCAGCCCCCGAGCGTGCTATTGCTCATGCGT
CTCTATACCTCCGCCAAACAACGTAAGCACCAATCATGCAGCTGCACCCTCAGAGTGCAT
ACGTCCACGTCCTCGAACCAATCCTTTGTAAGCCAATATCGCCCAGGCCTGTCTTCCAAT
CCACTTGCAATCAGTTCCCTCATGATCCTCATGACATAAAATCCGCAATCGATCGATCAC
ATTTGTCTGCTGAGGCACATCCACAACTTTGAGCTCAATCTCTTCCTTGGAATCAGCCAA
AGCACGTCGAACATCGTTGTCATGTACAAATT
■■Homology search results ■■ -
sp_hit_id Q7Z5L2
Definition sp|Q7Z5L2|GIDRP_HUMAN Growth inhibition and differentiation-related protein 88 OS=Homo sapiens
Align length 41
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918803|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_F05.
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7Z5L2|GIDRP_HUMAN Growth inhibition and differentiation-rela... 32 1.3
sp|Q8BJM3|GIDRP_MOUSE Growth inhibition and differentiation-rela... 32 2.2
sp|O13799|YE02_SCHPO Uncharacterized helicase C17H9.02 OS=Schizo... 31 2.9
sp|Q8CJ27|ASPM_MOUSE Abnormal spindle-like microcephaly-associat... 31 2.9
sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 OS... 30 6.5
sp|Q13029|PRDM2_HUMAN PR domain zinc finger protein 2 OS=Homo sa... 30 8.5
sp|A6M3G5|PDXT_CLOB8 Glutamine amidotransferase subunit pdxT OS=... 30 8.5
sp|Q4KLI9|FBXW5_RAT F-box/WD repeat-containing protein 5 OS=Ratt... 30 8.5
sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing protein 5 OS=Mu... 30 8.5
sp|Q969U6|FBXW5_HUMAN F-box/WD repeat-containing protein 5 OS=Ho... 30 8.5
sp|P30574|CBPY_CANAL Carboxypeptidase Y OS=Candida albicans GN=C... 30 8.5

>sp|Q7Z5L2|GIDRP_HUMAN Growth inhibition and differentiation-related
protein 88 OS=Homo sapiens GN=GIDRP88 PE=2 SV=2
Length = 792

Score = 32.3 bits (72), Expect = 1.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3

Query: 480 LADSKEEIELKVVDVPQQTNVIDRLRILCHEDHEGTDCKWI 358
L+D + +++ D PQ+ + D LR+ C +G D KW+
Sbjct: 637 LSDCEFPHVIEIYDFPQEFHTEDLLRVFCSYQKKGFDIKWV 677


>sp|Q8BJM3|GIDRP_MOUSE Growth inhibition and differentiation-related
protein 88 homolog OS=Mus musculus GN=Gidrp88 PE=2 SV=1
Length = 775

Score = 31.6 bits (70), Expect = 2.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3

Query: 453 LKVVDVPQQTNVIDRLRILCHEDHEGTDCKWI 358
+++ D PQ+ D LRI C +G D KW+
Sbjct: 629 IEIYDFPQEFRTEDLLRIFCSYQKKGFDIKWV 660


>sp|O13799|YE02_SCHPO Uncharacterized helicase C17H9.02
OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1
Length = 1030

Score = 31.2 bits (69), Expect = 2.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2

Query: 203 QNTSPRACYCSCVSIPPPNNVSTNHAAAPSECIRPRPRTNPL 328
+ +P Y V +P +N +NH PS + PRP PL
Sbjct: 672 EQVAPHETYVLDVLLPISSNSMSNHKVNPSILVPPRPNETPL 713


>sp|Q8CJ27|ASPM_MOUSE Abnormal spindle-like microcephaly-associated
protein homolog OS=Mus musculus GN=Aspm PE=2 SV=1
Length = 3122

Score = 31.2 bits (69), Expect = 2.9
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2

Query: 245 IPPPNNVSTNHAAAPSECIRPRPRTNPL*ANIAQACLPIHLQSVPS*SS*HKIRN 409
+ P N++ + ++P+E P P +P+ ++ CLP+ L+ + SS H+ N
Sbjct: 181 LQPCENLAMSECSSPTENKVPTPSISPIRECQSETCLPLFLRESTAYSSLHESEN 235


>sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1
OS=Bovine herpesvirus 4 (strain DN-599) GN=IE1 PE=3 SV=1
Length = 285

Score = 30.0 bits (66), Expect = 6.5
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Frame = +2

Query: 101 KHSLRSAQNGGFKIHKVHRCISIVSIEFI---------CWICSQNTS-PRACYCSC 238
KH+ ++ G + V +C I +E CWIC S P A YC+C
Sbjct: 94 KHTSKNPTKGEIQYFPVEKCKDIHRVENQSSIDEEGKQCWICRDGESLPEARYCNC 149


>sp|Q13029|PRDM2_HUMAN PR domain zinc finger protein 2 OS=Homo sapiens
GN=PRDM2 PE=1 SV=3
Length = 1718

Score = 29.6 bits (65), Expect = 8.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2

Query: 239 VSIPPPNNVSTNHAAAPSECIRPRPRTNPL*ANIAQACLPI 361
V+ PPP + T APS P P +PL AQ+ LPI
Sbjct: 982 VATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPI 1022


>sp|A6M3G5|PDXT_CLOB8 Glutamine amidotransferase subunit pdxT
OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=pdxT PE=3 SV=1
Length = 190

Score = 29.6 bits (65), Expect = 8.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3

Query: 471 SKEEIELKVVDVPQQTNVIDRLRILCHED 385
SK+E+EL + P T V D +RILC D
Sbjct: 125 SKDEMELVFIRAPYITEVKDNVRILCKVD 153


>sp|Q4KLI9|FBXW5_RAT F-box/WD repeat-containing protein 5 OS=Rattus
norvegicus GN=Fbxw5 PE=2 SV=1
Length = 569

Score = 29.6 bits (65), Expect = 8.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1

Query: 410 DCGFYVMRIMRELIASGLEDRPGRYW 333
+C F + + R+ +ASG EDR G W
Sbjct: 474 ECFFIFLDVSRDFVASGAEDRHGYIW 499


>sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing protein 5 OS=Mus
musculus GN=Fbxw5 PE=1 SV=1
Length = 573

Score = 29.6 bits (65), Expect = 8.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1

Query: 410 DCGFYVMRIMRELIASGLEDRPGRYW 333
+C F + + R+ +ASG EDR G W
Sbjct: 474 ECFFIFLDVSRDFVASGAEDRHGYIW 499


>sp|Q969U6|FBXW5_HUMAN F-box/WD repeat-containing protein 5 OS=Homo
sapiens GN=FBXW5 PE=1 SV=1
Length = 566

Score = 29.6 bits (65), Expect = 8.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1

Query: 410 DCGFYVMRIMRELIASGLEDRPGRYW 333
+C F + + R+ +ASG EDR G W
Sbjct: 471 ECFFIFLDVSRDFVASGAEDRHGYIW 496


tr_hit_id A5BKK8
Definition tr|A5BKK8|A5BKK8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 40
Score (bit) 34.7
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918803|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_F05.
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BKK8|A5BKK8_VITVI Putative uncharacterized protein OS=Vitis... 35 2.8
tr|B8LRB5|B8LRB5_PICSI Putative uncharacterized protein OS=Picea... 29 4.5
tr|A5AGA3|A5AGA3_VITVI Putative uncharacterized protein OS=Vitis... 34 4.8
tr|Q86ZD9|Q86ZD9_9ASCO Type I polyketide synthase OS=Phoma sp. C... 34 4.8
tr|A5BU47|A5BU47_VITVI Putative uncharacterized protein OS=Vitis... 33 6.2
tr|A5BSS4|A5BSS4_VITVI Putative uncharacterized protein OS=Vitis... 33 6.2
tr|A5BMG6|A5BMG6_VITVI Putative uncharacterized protein (Fragmen... 33 6.2
tr|A5BIL3|A5BIL3_VITVI Putative uncharacterized protein OS=Vitis... 33 6.2
tr|A8IP09|A8IP09_CHLRE Predicted protein OS=Chlamydomonas reinha... 33 8.1

>tr|A5BKK8|A5BKK8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028949 PE=4 SV=1
Length = 312

Score = 34.7 bits (78), Expect = 2.8
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 6/40 (15%)
Frame = -1

Query: 470 PRKRLSSK---LWM---CLSRQM*SIDCGFYVMRIMRELI 369
P K+ SSK W+ CL RQ+ S++CG+YVMR M+++I
Sbjct: 240 PEKQRSSKREPTWVKVVCL-RQLGSVECGYYVMRYMKDII 278


>tr|B8LRB5|B8LRB5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 586

Score = 29.3 bits (64), Expect(2) = 4.5
Identities = 15/66 (22%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -1

Query: 410 DCGFYVMRIMRELIASG-----LEDRPGRYWLTKDWFEDVDVCTLRVQLHDWCLR---CL 255
DCG +++ + + + + + Y+LTK+WF+ ++ R Q++D L+ C+
Sbjct: 493 DCGVFLLHFVDKFLKRAPKNFSISEGCYPYFLTKNWFKSHEIGKRRKQIYDVILKDRHCV 552

Query: 254 AEV*RR 237
+++ +R
Sbjct: 553 SQMTKR 558



Score = 23.9 bits (50), Expect(2) = 4.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3

Query: 507 VHDNDVRRALADSKEEIELKVVDVPQQTNVIDRLRILCH 391
VH+ D R+ +I L V +VPQQTN D L H
Sbjct: 462 VHNEDGRQDGDKIIAKIPLLVPEVPQQTNGNDCGVFLLH 500


>tr|A5AGA3|A5AGA3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027850 PE=4 SV=1
Length = 736

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 5/41 (12%)
Frame = -1

Query: 470 PRKRLSSK---LWMCL--SRQM*SIDCGFYVMRIMRELIAS 363
P K+ +SK W+ + RQ S++CG+YVMR M+E+IA+
Sbjct: 647 PEKQKTSKREPTWVKVVCPRQPGSVECGYYVMRYMKEIIAN 687


>tr|Q86ZD9|Q86ZD9_9ASCO Type I polyketide synthase OS=Phoma sp. C2932
PE=2 SV=1
Length = 2603

Score = 33.9 bits (76), Expect = 4.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1

Query: 371 IASGLEDRPGRYWLTKDWFEDVDVCTLRVQLHD 273
I +G+ +PGR+W W +D TLR + D
Sbjct: 2454 IITGISTKPGRHWTESSWLQDARFATLRERARD 2486


>tr|A5BU47|A5BU47_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003642 PE=4 SV=1
Length = 1783

Score = 33.5 bits (75), Expect = 6.2
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 5/39 (12%)
Frame = -1

Query: 470 PRKRLSSK---LWMCL--SRQM*SIDCGFYVMRIMRELI 369
P K+ SSK W+ + RQ+ S++CG+YVMR M+++I
Sbjct: 1610 PEKQRSSKREPTWVKVVCPRQLGSVECGYYVMRYMKDII 1648


>tr|A5BSS4|A5BSS4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_030496 PE=4 SV=1
Length = 1464

Score = 33.5 bits (75), Expect = 6.2
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 5/39 (12%)
Frame = -1

Query: 470 PRKRLSSK---LWMCL--SRQM*SIDCGFYVMRIMRELI 369
P K+ SSK W+ + RQ+ S++CG+YVMR M+++I
Sbjct: 1386 PEKQRSSKREPTWVKVVCPRQLGSVECGYYVMRYMKDII 1424


>tr|A5BMG6|A5BMG6_VITVI Putative uncharacterized protein (Fragment)
OS=Vitis vinifera GN=VITISV_036906 PE=4 SV=1
Length = 1394

Score = 33.5 bits (75), Expect = 6.2
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 5/39 (12%)
Frame = -1

Query: 470 PRKRLSSK---LWMCL--SRQM*SIDCGFYVMRIMRELI 369
P K+ SSK W+ + RQ+ S++CG+YVMR M+++I
Sbjct: 1285 PEKQRSSKREPTWVKVVCPRQLGSVECGYYVMRYMKDII 1323


>tr|A5BIL3|A5BIL3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034073 PE=4 SV=1
Length = 1397

Score = 33.5 bits (75), Expect = 6.2
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 5/39 (12%)
Frame = -1

Query: 470 PRKRLSSK---LWMCL--SRQM*SIDCGFYVMRIMRELI 369
P K+ SSK W+ + RQ+ S++CG+YVMR M+++I
Sbjct: 1296 PEKQRSSKREPTWVKVVCPRQLGSVECGYYVMRYMKDII 1334


>tr|A8IP09|A8IP09_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_205734 PE=4 SV=1
Length = 281

Score = 33.1 bits (74), Expect = 8.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2

Query: 230 CSCVSIPPPNNVSTNHAAAPSECIRPRPRTNP 325
C PPP+ S HA+ PS PRP T+P
Sbjct: 109 CRAPRTPPPSAASPRHASPPSGSRTPRPATSP 140