| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918808|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_F10.
(461 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|A3DHZ7|RECF_CLOTH DNA replication and repair protein recF OS=... 32 1.3
sp|P85001|CE290_DANRE Centrosomal protein of 290 kDa OS=Danio re... 31 2.2
sp|Q9P6R4|MU172_SCHPO Meiotically up-regulated gene 172 protein ... 31 2.9
sp|O15909|RIR1_TRYBB Ribonucleoside-diphosphate reductase large ... 30 6.5
sp|P35262|L_MABVP Large structural protein OS=Lake Victoria marb... 30 6.5
sp|P14745|CD44_PAPHA CD44 antigen OS=Papio hamadryas GN=CD44 PE=... 30 6.5
sp|A5I6Z2|GATB_CLOBH Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 29 8.5
sp|A7FYL2|GATB_CLOB1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 29 8.5
sp|P35470|CH602_RHIME 60 kDa chaperonin 2 OS=Rhizobium meliloti ... 29 8.5
sp|P16070|CD44_HUMAN CD44 antigen OS=Homo sapiens GN=CD44 PE=1 SV=2 29 8.5
>sp|A3DHZ7|RECF_CLOTH DNA replication and repair protein recF
OS=Clostridium thermocellum (strain ATCC 27405 / DSM
1237) GN=recF PE=3 SV=1
Length = 369
Score = 32.0 bits (71), Expect = 1.3
Identities = 32/118 (27%), Positives = 54/118 (45%)
Frame = +2
Query: 89 IQKLNVILLADLEMSTCMPTISMPWDQYVEEGSNNDEDRRLRGINGEASTSQDHVFTSQR 268
I++LN I D+E+ C+ I D Y E L G+N + SQ TS
Sbjct: 245 IRQLNSI--RDIELKRCVTLIGPHRDDYEME---------LNGLNLKMFGSQGQQRTSLL 293
Query: 269 TAQLHKLLNAHKDQGNIGPISVLEGKACRLEDRAKIHPFLLTRLLNVQSSIAVRDSEI 442
+ +L ++ K + + P+ +L+ L+ + + FLL + NVQ+ I D E+
Sbjct: 294 SLKLAEI-EIIKSETDEDPVLLLDDVMSELDFKRR--EFLLENIRNVQTFITCTDKEL 348
>sp|P85001|CE290_DANRE Centrosomal protein of 290 kDa OS=Danio rerio
GN=cep290 PE=2 SV=1
Length = 2439
Score = 31.2 bits (69), Expect = 2.2
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +2
Query: 176 EEGSNNDEDRRLRGINGEASTSQDHVFTSQRTAQLHKLLNAHKDQ---GNIGPISVLEGK 346
++G ++D RRL ++ + ++ V +QR AQL + KD+ + I + E
Sbjct: 390 DKGHSSDHQRRLEDLSAKLQVAERKVLEAQRAAQLAERDARDKDKELNDTLSRIRLYESG 449
Query: 347 ACRLEDRAKIHPFLLTRLLNVQSSIAVRDSEIE 445
LE ++ + ++ I VRD EIE
Sbjct: 450 TDGLE-------AAISEIKECKNQIRVRDREIE 475
>sp|Q9P6R4|MU172_SCHPO Meiotically up-regulated gene 172 protein
OS=Schizosaccharomyces pombe GN=mug172 PE=1 SV=1
Length = 331
Score = 30.8 bits (68), Expect = 2.9
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 188 NNDEDRRLRGINGEASTSQDHVFT--SQRTAQLHKLLNAHKDQGNIGPISVLEGKACRLE 361
NNDE + L+G+N E S + T S L ++L+ ++ N P V E A L+
Sbjct: 212 NNDEFQLLKGLNNELKKSNGTLLTCLSGTLNSLVEMLSPLYERPNSNPFEVCELNAILLD 271
Query: 362 DRAKIHPFLLTRLLNVQSSIAV 427
+ + + LL+ + +++
Sbjct: 272 AKIQNQLLFIRNLLHERKYVSI 293
>sp|O15909|RIR1_TRYBB Ribonucleoside-diphosphate reductase large
subunit OS=Trypanosoma brucei brucei GN=RNR1 PE=2 SV=1
Length = 838
Score = 29.6 bits (65), Expect = 6.5
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +2
Query: 71 EAARLNIQKLNVILLADLEMSTCMPTISMPWDQY----VEEGSNN----DEDRRLRGING 226
EA +LN Q I +A +E ST + P++ + EG DE+RR+RG+N
Sbjct: 532 EAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIRGMNE 591
Query: 227 EA 232
++
Sbjct: 592 DS 593
>sp|P35262|L_MABVP Large structural protein OS=Lake Victoria
marburgvirus (strain Popp-67) GN=L PE=3 SV=1
Length = 2331
Score = 29.6 bits (65), Expect = 6.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 382 WMYFCSIL*STSLSLQHRDGPYISLILMSIQQFMKLCSPLRC-KNMVLAGTCLPID 218
W+YF S +G + IL +Q+ L SP + K+ +LA TC PID
Sbjct: 1601 WLYFPS------------EGQQLKPILKILQRLSDLLSPDKVQKHQILADTCCPID 1644
>sp|P14745|CD44_PAPHA CD44 antigen OS=Papio hamadryas GN=CD44 PE=1
SV=1
Length = 362
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 173 VEEGSNNDEDRRLRGINGEASTSQDHV 253
+ G+ EDR+ G+NGEAS SQ+ V
Sbjct: 304 INNGNGAVEDRKSSGLNGEASKSQEMV 330
>sp|A5I6Z2|GATB_CLOBH Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Clostridium botulinum
(strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=gatB
PE=3 SV=1
Length = 476
Score = 29.3 bits (64), Expect = 8.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Frame = +2
Query: 146 TISMPWDQYVEEGSNNDEDRRL----------RGINGEASTSQDHVFTSQRTAQLHKLLN 295
T++M ++ EE + ED + R +N +A +D F ++ AQL KL+N
Sbjct: 319 TLTMDMAKFFEETALKSEDAKAASNWLMGDISRLMNEKAIEVKDLKFNPEQLAQLIKLIN 378
Query: 296 AHKDQGNIG 322
A NIG
Sbjct: 379 AGTISNNIG 387
>sp|A7FYL2|GATB_CLOB1 Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Clostridium botulinum
(strain ATCC 19397 / Type A) GN=gatB PE=3 SV=1
Length = 476
Score = 29.3 bits (64), Expect = 8.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Frame = +2
Query: 146 TISMPWDQYVEEGSNNDEDRRL----------RGINGEASTSQDHVFTSQRTAQLHKLLN 295
T++M ++ EE + ED + R +N +A +D F ++ AQL KL+N
Sbjct: 319 TLTMDMAKFFEETALKSEDAKAASNWLMGDISRLMNEKAIEVKDLKFNPEQLAQLIKLIN 378
Query: 296 AHKDQGNIG 322
A NIG
Sbjct: 379 AGTISNNIG 387
>sp|P35470|CH602_RHIME 60 kDa chaperonin 2 OS=Rhizobium meliloti
GN=groL2 PE=2 SV=2
Length = 542
Score = 29.3 bits (64), Expect = 8.5
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 29/131 (22%)
Frame = +2
Query: 149 ISMPWDQYVEEGSNNDEDRRLRGINGEASTSQDHVFTSQRTAQLHKLL-NAHKDQGNIGP 325
I + + V+E NN R ++ A +Q ++ A++ + L A + GN G
Sbjct: 120 IDLAVEAIVKELRNN-----ARKVSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGV 174
Query: 326 ISVLEGKACRLE---------DRAKIHPFLLT-------------------RLLNVQSSI 421
I+V E K +E DR + P+ +T +L N+Q+ I
Sbjct: 175 ITVEEAKTAEIELEVVEGMEFDRGYLSPYFITNQEKMRVELEDAYILLHEKKLSNLQAMI 234
Query: 422 AVRDSEIETGK 454
+ +S I++GK
Sbjct: 235 PILESVIQSGK 245
>sp|P16070|CD44_HUMAN CD44 antigen OS=Homo sapiens GN=CD44 PE=1 SV=2
Length = 742
Score = 29.3 bits (64), Expect = 8.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 173 VEEGSNNDEDRRLRGINGEASTSQDHV 253
+ G+ EDR+ G+NGEAS SQ+ V
Sbjct: 684 INSGNGAVEDRKPSGLNGEASKSQEMV 710
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| Report |
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