BP918810
Clone id YMU001_000117_F12
Library
Length 412
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000117_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATAAAGTGTGGCCTGATGAAGGAAAGCTTCAGGGTCTTCTGAGAGTATGGCTTTCATGAC
AAAACAGCTAGGAGCAGGAAAAAGTGGATGAAACAATGAGTAAGGAAATGATGGCACAGC
TCATGGGGCACAGGTCGGTACACCAAGGTATAAGGTACTTGATGCTTGTTTGCTAAAGTG
CAAAAACTCTTCTTTTTGAGATTCTTTTAAAACAGAAATTATGTTTGTGCAACAAATTTT
AGCAATGCCTATTTGTAATATGGAAGGGGAAAAAACAAGATCTGAACATTACGTAACTTC
ATTGACCATGTGATTATTGAGCCTTGAGGTAGGGTATTACAAGGGTGGGAGTCTATCCAA
TTACTGCTTTGTCTCCCATCTGTGAGCATGAGTATGTCAAGAGAAACAGTGT
■■Homology search results ■■ -
sp_hit_id Q329F0
Definition sp|Q329F0|ADEC_SHIDS Adenine deaminase OS=Shigella dysenteriae serotype 1 (strain Sd197)
Align length 68
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918810|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_F12.
(412 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q329F0|ADEC_SHIDS Adenine deaminase OS=Shigella dysenteriae s... 30 2.9
sp|P07711|CATL1_HUMAN Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1... 29 8.4
sp|P53459|ACT6_DIPDE Actin-6 (Fragment) OS=Diphyllobothrium dend... 29 8.4

>sp|Q329F0|ADEC_SHIDS Adenine deaminase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=ade PE=3 SV=1
Length = 584

Score = 30.4 bits (67), Expect = 2.9
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2

Query: 321 LNNHMVNEVT*CSDLVFSPSILQIGIAKICCT--NIISVLKESQKEEFLHFSKQASSTLY 148
++ H+ E + + + F + L G+ + C I++V+ E+ F +KQA Y
Sbjct: 87 IDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAKQARQNQY 146

Query: 147 LGVPTCAP 124
L V +C P
Sbjct: 147 LQVSSCVP 154


>sp|P07711|CATL1_HUMAN Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1
SV=2
Length = 333

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1

Query: 46 YGFHDKTARSRKKWMKQ*VRK*WHSSWGTGRYTKV 150
YGF + + K W+ V+ W WG G Y K+
Sbjct: 283 YGFESTESDNNKYWL---VKNSWGEEWGMGGYVKM 314


>sp|P53459|ACT6_DIPDE Actin-6 (Fragment) OS=Diphyllobothrium
dendriticum GN=ACT6 PE=2 SV=1
Length = 373

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -2

Query: 303 NEVT*CSDLVFSPSIL---QIGIAKICCTNIISVLKESQKEEFLHFSKQASSTLYLGV 139
NE C + +F PS L +GI + C +I+ + +K+ + + ST+Y G+
Sbjct: 250 NERFRCPEALFQPSFLGLESVGIHETCYNSIMKCDLDIRKDLYSNIVLSGGSTMYPGI 307


tr_hit_id B0JL63
Definition tr|B0JL63|B0JL63_MICAN Type 2 NADH dehydrogenase OS=Microcystis aeruginosa (strain NIES-843)
Align length 47
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918810|Adiantum capillus-veneris mRNA, clone:
YMU001_000117_F12.
(412 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0JL63|B0JL63_MICAN Type 2 NADH dehydrogenase OS=Microcystis ... 33 7.1
tr|A7T0I7|A7T0I7_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 7.1

>tr|B0JL63|B0JL63_MICAN Type 2 NADH dehydrogenase OS=Microcystis
aeruginosa (strain NIES-843) GN=ndbB1 PE=4 SV=1
Length = 420

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -3

Query: 407 VSLDILMLTDGRQSSNWIDSHPCNTLPQGSIITWSMKLRNVQILFFP 267
+ +D+L+ T G Q+ +WI++ C QG ++T S ++Q++ +P
Sbjct: 240 IPIDLLLWTAGTQAQDWINNLDCQKTAQGKLLTRS----SLQLIDYP 282


>tr|A7T0I7|A7T0I7_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g64214 PE=4 SV=1
Length = 256

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3

Query: 167 KHQVPYTLVYRPVPHELCHHFLTHCFIHFFLLLAVLS*KPYSQKTLKLSFI 15
KH +PY L+ +P+ L H++ +C + ++ +L KPY L + +I
Sbjct: 134 KHYIPYCLLKPYIPYCLPKHYIPYCLLEHYIPYCLL--KPYIPYCLLMPYI 182



Score = 32.7 bits (73), Expect = 9.3
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3

Query: 167 KHQVPYTLVYRPVPHELCHHFLTHCFIHFFLLLAVLS*KPYSQKTLKLSFI 15
KH +PY L+ +P+ L H++ +C + ++ +L KPY L + +I
Sbjct: 189 KHYIPYCLLKPYIPYCLPKHYIPYCLLKHYIPYCLL--KPYIPYCLLMPYI 237